BLASTX nr result
ID: Atropa21_contig00041501
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00041501
(622 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34321.1| RNase H family protein [Solanum demissum] 157 2e-36
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 109 7e-22
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 107 2e-21
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 106 6e-21
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 105 1e-20
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 105 1e-20
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 104 2e-20
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 104 2e-20
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 102 9e-20
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 102 1e-19
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 101 1e-19
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 99 1e-18
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 97 4e-18
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 97 5e-18
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 96 1e-17
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 95 1e-17
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 93 7e-17
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 91 3e-16
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 91 3e-16
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 87 3e-15
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 157 bits (398), Expect = 2e-36
Identities = 78/195 (40%), Positives = 113/195 (57%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHK 215
C CC ET+ H+F+ D A + K FG LGI + S + + +TW N++ +N++H
Sbjct: 608 CVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHN 667
Query: 216 LILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWP 395
+I+ +PI I WEIWK CKYGDQ+K + R ME + WN+ ++ + FPS +I SW
Sbjct: 668 VIIHTLPILIFWEIWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWR 727
Query: 396 HFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAF 575
+E LR K VHW+ K+ TDGSF N AG+G +VR+ + ++MAF
Sbjct: 728 DLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGN--AGLGWIVRDHTRRMIMAF 785
Query: 576 YVPIQCQSNNQAEAM 620
+P C SNN AEA+
Sbjct: 786 SIPSSCSSNNLAEAL 800
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 109 bits (272), Expect = 7e-22
Identities = 64/193 (33%), Positives = 88/193 (45%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHK 215
C CC +P +T++H GD AK V KYF LGI + W + N HK
Sbjct: 932 CHCCHSPGIDTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHK 991
Query: 216 LILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWP 395
LIL PI I W +WK+ KYG ++ R + I N ++ FP W
Sbjct: 992 LILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFK-LLHTVFPYISWPLRWN 1050
Query: 396 HFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAF 575
FC ++E V W+K KL TDGS + G G V+RN G +++A+
Sbjct: 1051 KFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAY 1110
Query: 576 YVPIQCQSNNQAE 614
P+ +NNQAE
Sbjct: 1111 STPLGTGTNNQAE 1123
Score = 73.6 bits (179), Expect = 4e-11
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Frame = +3
Query: 36 CFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMH 212
CFCC + +T++H F +G A + K F A GI S ++ W + K N +
Sbjct: 635 CFCCCNRSGLDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAY 694
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
+LILQ PI I W +WK+ KYG ++ +R ++ I + M FP K +W
Sbjct: 695 RLILQATPIFICWNLWKNRCASKYGGKQSNISR-VKYAIYKDNYKLMTTTFPQIKWPSNW 753
Query: 393 PHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVR 545
Q+ ER V W K ++ K+ TDGS + G G ++
Sbjct: 754 MELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIGAGSNIQ 804
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 107 bits (268), Expect = 2e-21
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 1/194 (0%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRT-WRNMKDYNNMH 212
C+CC + + HI + + A + KY A LG+T QL++ +R Q WRN N +H
Sbjct: 1315 CYCCYQQGKDDINHILLTRNFANYIWKYHAAILGVT-QLYTNIRSQLMHWRNQHTINEVH 1373
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
KLI+Q++P I W +WK+ G KYG + R ++ I +I + + +P S
Sbjct: 1374 KLIMQILPNYICWNLWKNRCGVKYGHKTSSIKR-VQYGIFKDIMQVIRLVYPIIPWQSSL 1432
Query: 393 PHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMA 572
H + E V W K E +KL TDGS I G GG++R+ +G ++ A
Sbjct: 1433 YHLIKTAEHCHQQYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYA 1492
Query: 573 FYVPIQCQSNNQAE 614
F VP+ +NN AE
Sbjct: 1493 FSVPLDFGTNNMAE 1506
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 106 bits (264), Expect = 6e-21
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Frame = +3
Query: 33 TCFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNM 209
+CFCC ++++H F G A +V + F G+ S R W + N
Sbjct: 83 SCFCCVDRTRMDSIEHTFNSGSFATKVWRAFTTTAGLQEDQSSVQARLRQWWTARPRNAS 142
Query: 210 HKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGS 389
H+L+LQ +PI I W +WK+ CKYG + +R ++ + + + IAFP G+
Sbjct: 143 HQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISR-VKYAVYKDTFKMLKIAFPRVNWPGN 201
Query: 390 WPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVM 569
W Q ER + + W++ E+ K+ TDGS ++ G GG++R+ G +V+
Sbjct: 202 WAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKMVL 261
Query: 570 AFYVPIQCQSNNQAEA 617
AF P+ +NN+AEA
Sbjct: 262 AFATPLGDGTNNKAEA 277
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 105 bits (262), Expect = 1e-20
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Frame = +3
Query: 21 SRIPTCFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRT-WRNMKD 197
S I C CC + + HI + G+ AK + K A LGI + + +R Q WRN K
Sbjct: 395 SNISDCSCCYRKGKDDINHILINGNFAKYIWKIHAATLGII-PVNTNLRAQLLHWRNQKV 453
Query: 198 YNNMHKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCK 377
N +HKL++ ++P I W +WK+ KYG +R +++ I + + + FPS
Sbjct: 454 NNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRS-NVHRVKYGIFKEVMQIIKLVFPSIP 512
Query: 378 ITGSWPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSG 557
+W + I+E V W+K +KL TDGS I + G GG++R+ G
Sbjct: 513 WQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQG 572
Query: 558 NVVMAFYVPIQCQSNNQAE 614
+V AF +P +NN AE
Sbjct: 573 KIVYAFSIPFGVGTNNFAE 591
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 105 bits (261), Expect = 1e-20
Identities = 58/193 (30%), Positives = 99/193 (51%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHK 215
C+CC + + HI + G+ AK + K + + +G+ + + WRN + N +HK
Sbjct: 1139 CYCCYNKGKDDINHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHK 1198
Query: 216 LILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWP 395
L++ ++P I W +WK+ KYG + R ++ I NI + I FPS SW
Sbjct: 1199 LLIHILPNFICWNLWKNRCAVKYGLKNSSIYR-VQYGIFKNIMQVITIVFPSIPWQTSWN 1257
Query: 396 HFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAF 575
+ I+E+ + V W+K ++KL TDGS + + G GG++R++ G ++ AF
Sbjct: 1258 NLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAF 1317
Query: 576 YVPIQCQSNNQAE 614
+P +NN AE
Sbjct: 1318 SLPFGFGTNNFAE 1330
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 104 bits (259), Expect = 2e-20
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Frame = +3
Query: 33 TCFCC-STPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNM 209
+CFCC ++++H F G A +V + F G+ S R W + N
Sbjct: 354 SCFCCVDRTGMDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNAS 413
Query: 210 HKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGS 389
H+L+LQ +PI I W +WK+ CKYG + +R ++ I + + AFP G+
Sbjct: 414 HQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISR-VKYAIYKDTFKMLKSAFPCINWPGN 472
Query: 390 WPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVM 569
W Q ER + + W++ E+ K+ TDGS ++ G GG++R+ G +V+
Sbjct: 473 WAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVL 532
Query: 570 AFYVPIQCQSNNQAEA 617
AF P+ +NN+AEA
Sbjct: 533 AFATPLGDGTNNKAEA 548
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 104 bits (259), Expect = 2e-20
Identities = 61/198 (30%), Positives = 97/198 (48%)
Frame = +3
Query: 21 SRIPTCFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDY 200
S I C+CC + + + HI + G+ AK + K A LG+ + WRN +
Sbjct: 941 SAISKCYCCYSKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVN 1000
Query: 201 NNMHKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKI 380
N +HKL++ ++P I W +WK+ KYG++ R ++ I ++ + I FPS
Sbjct: 1001 NEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHR-VQYGIFKDVMQVIKIVFPSIPW 1059
Query: 381 TGSWPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGN 560
SW I+E + V W+K +KL TDGS + + G GG++R+ G
Sbjct: 1060 QSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGK 1119
Query: 561 VVMAFYVPIQCQSNNQAE 614
+V AF +P +NN AE
Sbjct: 1120 IVYAFSLPFGFGTNNIAE 1137
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 102 bits (254), Expect = 9e-20
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Frame = +3
Query: 36 CFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMH 212
CFCC A +T+ H F G A V K F A G+ R W + N H
Sbjct: 22 CFCCFDRAGMDTIDHTFNSGPFAAGVWKAFTAGAGLQADRTPLQAKLRQWWTARPRNEGH 81
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
+L+LQ P+ I W +WK+ CKYG +R ++ + + + +AFP GSW
Sbjct: 82 QLLLQATPVFIVWNLWKNICACKYGGTSTNISR-VKYAVYKDTFKMLKMAFPHINWPGSW 140
Query: 393 PHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMA 572
Q E + + V W++ E+ K+ TDGS + G GG++R+ G +VMA
Sbjct: 141 AALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSALTNPGQTGAGGILRDKEGKMVMA 200
Query: 573 FYVPIQCQSNNQAEA 617
F P+ +NN AEA
Sbjct: 201 FATPLGEGTNNTAEA 215
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 102 bits (253), Expect = 1e-19
Identities = 60/193 (31%), Positives = 95/193 (49%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHK 215
C+CC + LKHI + G+ AK + K LGI + +WR + YN +HK
Sbjct: 74 CYCCYRKGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHK 133
Query: 216 LILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWP 395
LIL ++P I W +WK+ KYG++ R +E I +I + +P+ SW
Sbjct: 134 LILHILPNIICWNLWKNRCSAKYGNKPSSIYR-VESGIFKDIMQIIKAVYPNIPWQSSWE 192
Query: 396 HFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAF 575
++E+ + + V+W + E KL TDGS G GG++R+ G ++ AF
Sbjct: 193 RLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAF 252
Query: 576 YVPIQCQSNNQAE 614
+P+ +NN AE
Sbjct: 253 AIPLGFGTNNFAE 265
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 101 bits (252), Expect = 1e-19
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Frame = +3
Query: 36 CFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMH 212
CFCC A +T++HIF G A V +F A GI + + + W K N H
Sbjct: 152 CFCCFDRAGMDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGH 211
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
KL+LQ PI I W +WK+ CKYG + +R ++ I + + +FPS +W
Sbjct: 212 KLLLQATPIFICWNLWKNRCACKYGGKGTNISR-VKYAIYKDTFKMLKNSFPSINWPANW 270
Query: 393 PHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMA 572
E+ + V W K ++ K+ TDGS + G GG++R+ G ++MA
Sbjct: 271 TTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMA 330
Query: 573 FYVPIQCQSNNQAE 614
F P+ SNNQAE
Sbjct: 331 FSTPLGEGSNNQAE 344
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 98.6 bits (244), Expect = 1e-18
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 2/195 (1%)
Frame = +3
Query: 36 CFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMH 212
C+CC A +++ HIF G+ A +V K F A G+ + + W K N H
Sbjct: 459 CYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGH 518
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
+L+LQ PI I W +WK+ CKYG + +R ++ + + M AFP + W
Sbjct: 519 QLLLQATPIFICWNLWKNRCACKYGGKATNISR-VKYAVYKDNFKMMKNAFPHIQWPAHW 577
Query: 393 PHFCQILERLR-TVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVM 569
E+ + +C+ V W++ EE K+ TDGS + G GG++RN G +VM
Sbjct: 578 TALIHTSEKCKHDTKVCQ-VVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVM 636
Query: 570 AFYVPIQCQSNNQAE 614
AF + SNN+AE
Sbjct: 637 AFATSLGEGSNNKAE 651
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 97.1 bits (240), Expect = 4e-18
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Frame = +3
Query: 42 CCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRT-WRNMKDYNNMHKL 218
CC + + HI + G+ AK + K A LGI + + +R Q WRN + N +HKL
Sbjct: 1020 CCYRKGKDDINHILINGNFAKYIWKIHAATLGII-PVNTTLRAQLLHWRNQQVNNEVHKL 1078
Query: 219 ILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWPH 398
++ ++P I W +WK+ KYG +R R ++ I + + + FPS +W +
Sbjct: 1079 LIHILPNIICWNLWKNRCAVKYGKKRSSIHR-VKYGIFKEVMQVIKLVFPSIPWQSNWNN 1137
Query: 399 FCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAFY 578
I+E V W+K +KL TDGS I + G GG +R+ G +V AF
Sbjct: 1138 LVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFS 1197
Query: 579 VPIQCQSNNQAE 614
+P +NN AE
Sbjct: 1198 IPFGVGTNNFAE 1209
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 96.7 bits (239), Expect = 5e-18
Identities = 56/202 (27%), Positives = 100/202 (49%)
Frame = +3
Query: 9 YGNNSRIPTCFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRN 188
+G+N+ C+CC+ + + HI + G+ A + KY+ GIT + W N
Sbjct: 633 FGSNAT--DCYCCNRKGIDDINHILITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTN 690
Query: 189 MKDYNNMHKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFP 368
+ N ++KL++ ++P I W +WK+ KYG++ R ++ I ++ + I FP
Sbjct: 691 LPSSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISSIQR-VQYGIFKDVMQTIKIVFP 749
Query: 369 SCKITGSWPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRN 548
+ SW ++E+ + + V W K +KL TDGS + + G GG++R+
Sbjct: 750 NIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGILRD 809
Query: 549 DSGNVVMAFYVPIQCQSNNQAE 614
+G + AF +P +NN AE
Sbjct: 810 YTGKLHYAFSIPFGLGTNNIAE 831
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 95.5 bits (236), Expect = 1e-17
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Frame = +3
Query: 36 CFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMR-IQRTWRNMKDYNNMH 212
C+CC + + HI + G+ AK + K LG+ HQ + +R + WRN+ +N +
Sbjct: 695 CYCCFRKGKDDILHILITGNFAKYIWKIHATRLGV-HQDHANLRSLLLHWRNIPVHNQVQ 753
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
KL+ Q++P I W +WK+ K+G ++ T++++ I + A+ +AFP+ +
Sbjct: 754 KLLYQILPNFICWNLWKNRCAVKHGS-KQCSTQRVQYAIFKDTMQAVMVAFPNISRQNNL 812
Query: 393 PHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMA 572
+ E + V V W K FKL TDGS I G GG++R+ +G ++ A
Sbjct: 813 DMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYA 872
Query: 573 FYVPIQCQSNNQAE 614
F +P +NN AE
Sbjct: 873 FAIPFGIGTNNFAE 886
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 95.1 bits (235), Expect = 1e-17
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Frame = +3
Query: 36 CFCCSTPAN-ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMH 212
C+CC A +++ HIF G+ A +V K F A G+ + + W K N H
Sbjct: 459 CYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGH 518
Query: 213 KLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSW 392
+L+LQ PI I W +WK+ CKYG + +R + N N AFP + W
Sbjct: 519 QLLLQATPIFICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKN-AFPHIQWPAHW 577
Query: 393 PHFCQILERLR-TVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVM 569
E+ + +C+ V W++ EE K+ TDGS + G GG++RN G +VM
Sbjct: 578 TALIHTSEKCKHDTKVCQ-VVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVM 636
Query: 570 AFYVPIQCQSNNQAE 614
AF + + N+A+
Sbjct: 637 AFATSLGEGTKNKAK 651
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 92.8 bits (229), Expect = 7e-17
Identities = 56/184 (30%), Positives = 90/184 (48%)
Frame = +3
Query: 63 ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHKLILQVVPI* 242
+++ H F G A +V +F A G+ S + W + N H+L+LQ P
Sbjct: 2 DSIDHTFNSGPFAARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTF 61
Query: 243 INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWPHFCQILERL 422
I W +WK+ CKYG + +R ++ + + + IAFP K SW Q E+
Sbjct: 62 ICWNLWKNRCACKYGAKATNISR-VKYAVYKDTFKMLKIAFPHIKWPASWTALIQTSEKC 120
Query: 423 RTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAFYVPIQCQSN 602
+ + V W++ E+ K+ TDGS + G GG++R+ G +V+AF P+ SN
Sbjct: 121 KHEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSN 180
Query: 603 NQAE 614
N+AE
Sbjct: 181 NKAE 184
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 90.9 bits (224), Expect = 3e-16
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 1/185 (0%)
Frame = +3
Query: 63 ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHKLILQVVPI* 242
++++H F G A +V +F A G+ + S R W + N H+L+LQ P
Sbjct: 10 DSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTF 69
Query: 243 INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWPHFCQILERL 422
+ W +WK+ CKYG + +R ++ I + + FP K +W Q E+
Sbjct: 70 VCWNLWKNRCACKYGGKATNISR-VKYAIYKDTFKMLQNTFPHIKWPSNWTALYQTSEKC 128
Query: 423 R-TVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAFYVPIQCQS 599
+ + +CK V W++ EE K+ TDGS I G GG++R+ G +V+AF + S
Sbjct: 129 KHDIKVCK-VAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGS 187
Query: 600 NNQAE 614
NNQAE
Sbjct: 188 NNQAE 192
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 90.5 bits (223), Expect = 3e-16
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Frame = +3
Query: 63 ETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRTWRNMKDYNNMHKLILQVVPI* 242
+++ HIF G A V K F A G+ H + W N H+L+LQ PI
Sbjct: 2 DSIDHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIF 61
Query: 243 INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKITGSWPHFCQILERL 422
I W +WK+ KYG + + +R ++ I + M AFP W ER
Sbjct: 62 ICWNLWKNRCASKYGGKATYISR-VKYAIYKDNFKMMKNAFPHINWPAHWTALITTSERC 120
Query: 423 R-TVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNVVMAFYVPIQCQS 599
+ + +CK V W++ EE K+ TDGS + G GG++R+ G +++AF + S
Sbjct: 121 KHEIKVCK-VTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGEGS 179
Query: 600 NNQAE 614
NN+AE
Sbjct: 180 NNKAE 184
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 87.4 bits (215), Expect = 3e-15
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 1/197 (0%)
Frame = +3
Query: 27 IPTCFCCSTPANETLKHIFVEGDAAKQV*KYFGAPLGITHQLWSPMRIQRT-WRNMKDYN 203
I C+CC + + + HI + G+ A + K + +G H + + MR Q WR+++ N
Sbjct: 283 IVDCYCCYSKVKDDINHILLTGNFANYIWKKHASTVGALH-VNTNMRSQLLYWRSLQTNN 341
Query: 204 NMHKLILQVVPI*INWEIWKSWTGCKYGDQRKFYTRKMEIPI*WNISAAMNIAFPSCKIT 383
+HKL++ +P I W +W++ KYG ++ R ++ I + + + + +
Sbjct: 342 EVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYR-VQYGIFKDTMQIIKLEYSNIPWQ 400
Query: 384 GSWPHFCQILERLRTVVICK*VHWSKLLEERFKLYTDGSFIVTNT*AGIGGVVRNDSGNV 563
SW H +++ + V W K R+KL TDGS + N GG++R+ G++
Sbjct: 401 YSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSI 460
Query: 564 VMAFYVPIQCQSNNQAE 614
+ AF P +NN A+
Sbjct: 461 IFAFASPFAFGTNNIAK 477