BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041460
         (1410 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   263   5e-83
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   241   3e-77
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   254   5e-77
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   222   8e-69
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   221   4e-68
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   261   7e-67
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   222   1e-62
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             174   1e-54
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   196   2e-47
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   186   2e-44
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   184   8e-44
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...   183   2e-43
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   182   4e-43
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   181   9e-43
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   179   2e-42
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   179   3e-42
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               179   3e-42
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               178   4e-42
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   178   4e-42
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   177   1e-41

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  263 bits (672), Expect(3) = 5e-83
 Identities = 127/268 (47%), Positives = 176/268 (65%)
 Frame = +1

Query: 55   MEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSE 234
            MEY  RCL   K  P+FN+HP+C++L +THL FADDLL+F R D +S+  +   F  FS 
Sbjct: 656  MEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSH 715

Query: 235  ASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLV 414
            ASGL A+  KS +   GVD+ T   +   +  +LGELPF+YLG+PL++K+LT  QCKPLV
Sbjct: 716  ASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLV 775

Query: 415  GKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTG 594
              I  +  TWMAK  +YAGRLQLIK +L  +Q YW  +F L KKVI+ +E  C  +LWTG
Sbjct: 776  EMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTG 835

Query: 595  EATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRY 774
            +   TK+A VAW  I  PK  GG  ++N++  N AA+ KLLWA+   ++KLW+  +H+ Y
Sbjct: 836  KTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYY 895

Query: 775  IKGQHVHTMVNPKQASWMIRKIISIRKY 858
            IK Q + T+    Q +W++RKI+  R +
Sbjct: 896  IKRQDILTVNISNQTTWILRKIVKARDH 923



 Score = 69.7 bits (169), Expect(3) = 5e-83
 Identities = 33/89 (37%), Positives = 48/89 (53%)
 Frame = +2

Query: 875  KFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEA 1054
            KF M  AY +   +   V WR+LI  N   PK  FILW+ LHE+L T   + +WG+  + 
Sbjct: 938  KFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDL 997

Query: 1055 PCVFCHAEPETKEHL*FGCTFTQDIWKGI 1141
                C  + ET +HL F C+++  +W  I
Sbjct: 998  NYRLCRNDGETIQHLFFSCSYSAGVWSKI 1026



 Score = 25.4 bits (54), Expect(3) = 5e-83
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 1203 CSIARGKHPRGVILKASYAAVIYGIWIERNTSIFS 1307
            C  AR K  +G ++   Y   +Y IW +RN   F+
Sbjct: 1047 CGQARKK--KGKLIVMLYTEFVYAIWKQRNKRTFT 1079


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  241 bits (616), Expect(3) = 3e-77
 Identities = 113/267 (42%), Positives = 175/267 (65%)
 Frame = +1

Query: 52   LMEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFS 231
            +MEY +R L+     P FNYH +C+K+ +T+LCFADDLLLF+R D+ SV ++ +KFN F 
Sbjct: 483  VMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFL 542

Query: 232  EASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPL 411
             + GL  N +K  +    VD + + ++L +  ++ G++PF+YLGIPLS+K+L +   + L
Sbjct: 543  RSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVL 602

Query: 412  VGKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWT 591
            + KI+ +IT W A   +YAGR+QLI+ V+F    +W +   LPK VI  I A C ++LW 
Sbjct: 603  IDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWI 662

Query: 592  GEATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTR 771
            G + I++++ +AWEK+C PK  GG  I+NL + N  +I KLLW +C   + LWI  +HT 
Sbjct: 663  GNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTY 722

Query: 772  YIKGQHVHTMVNPKQASWMIRKIISIR 852
            YI+GQ + +MV  K  SW++  ++ +R
Sbjct: 723  YIRGQSIWSMVLKKSHSWIMSSMMKLR 749



 Score = 67.4 bits (163), Expect(3) = 3e-77
 Identities = 36/115 (31%), Positives = 57/115 (49%)
 Frame = +2

Query: 878  FHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEAP 1057
            F M   Y     ++  + WR L+  N+  P+ +F LW   H +L +   L+K+G+NV+A 
Sbjct: 763  FKMKKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDAN 822

Query: 1058 CVFCHAEPETKEHL*FGCTFTQDIWKGILK*QKRQGGSHDWYTEWQGVMQHC*GQ 1222
            C FC +  E+ EHL FGC   + IW  +L   +       W  E   + + C G+
Sbjct: 823  CAFC-SSMESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGK 876



 Score = 29.6 bits (65), Expect(3) = 3e-77
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 1215 RGKHPRGVILKASYAAVIYGIWIERNTSIF 1304
            +GK  R ++LK ++   IY IW  RN  +F
Sbjct: 874  KGKGWRAMLLKCAFTETIYHIWAYRNHRVF 903


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  254 bits (649), Expect(2) = 5e-77
 Identities = 119/267 (44%), Positives = 174/267 (65%)
 Frame = +1

Query: 55   MEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSE 234
            MEY  RC+     +PEFN+HP+C+++ LTHL FADDLL+FAR D +S+  +   FN FS+
Sbjct: 659  MEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSK 718

Query: 235  ASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLV 414
            ASGL+A++ KS +   GV      ++   +   +G LPF+YLG+PL++K+L   QCKPL+
Sbjct: 719  ASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLI 778

Query: 415  GKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTG 594
             KI  +   W+A   +YAGRLQL+K +L+ +Q YW ++F LPKK+IK +E TC  +LWTG
Sbjct: 779  DKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTG 838

Query: 595  EATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRY 774
                + +A VAW+ +  PK  GG  + N+ L N AAI KLLWA+   ++KLW+  V+  Y
Sbjct: 839  TVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYY 898

Query: 775  IKGQHVHTMVNPKQASWMIRKIISIRK 855
            IK Q++  +      SW++RKI   R+
Sbjct: 899  IKRQNIENVTVSSNTSWILRKIFESRE 925



 Score = 62.4 bits (150), Expect(2) = 5e-77
 Identities = 31/89 (34%), Positives = 46/89 (51%)
 Frame = +2

Query: 878  FHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEAP 1057
            F +   Y   + D   V W++LI  N   PK  FILWL +  +L T   + +W  +V   
Sbjct: 942  FSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPL 1001

Query: 1058 CVFCHAEPETKEHL*FGCTFTQDIWKGIL 1144
            C  C  E ET +HL F C ++++IW  +L
Sbjct: 1002 CKMCGNEIETIQHLFFNCIYSKEIWGKVL 1030


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  222 bits (565), Expect(2) = 8e-69
 Identities = 106/268 (39%), Positives = 167/268 (62%)
 Frame = +1

Query: 52  LMEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFS 231
           +ME  +R L   + + +FNYHP+C KL +T+LCFADDLLLF+R D  SV ++   +  FS
Sbjct: 41  VMECLNRYLYKMQKDGDFNYHPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFS 100

Query: 232 EASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPL 411
           +A+GL  N  K  +   G+D  T+  IL V  ++ G+LPFKYLG+P+++K+L+ +   PL
Sbjct: 101 KATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPL 160

Query: 412 VGKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWT 591
           + KI+ KI  W A+  +YAGRLQL+  V+F +  YW   F  PK V++ IEA C  +LWT
Sbjct: 161 IDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWT 220

Query: 592 GEATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTR 771
           G    ++++ VAW++IC P+  GG  I+++ + N A + KLLW L   ++ LW+  +   
Sbjct: 221 GGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAY 280

Query: 772 YIKGQHVHTMVNPKQASWMIRKIISIRK 855
           Y+K   +  +      SW+++ I+  R+
Sbjct: 281 YVKRSELMHIEMKNTDSWIMKAILKQRE 308



 Score = 67.4 bits (163), Expect(2) = 8e-69
 Identities = 37/126 (29%), Positives = 61/126 (48%)
 Frame = +2

Query: 869  RGKFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNV 1048
            RG  +M   Y + +       W+ L++ N   P+  FILWL  H +L T   L K+GM  
Sbjct: 322  RGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMID 381

Query: 1049 EAPCVFCHAEPETKEHL*FGCTFTQDIWKGILK*QKRQGGSHDWYTEWQGVMQHC*GQTS 1228
            +  C FC +E E+  HL F C  ++ +W  +L+  + +    DW  E   +  H  G+ +
Sbjct: 382  DKSCCFC-SEEESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGT 440

Query: 1229 KRGHLE 1246
            +   L+
Sbjct: 441  RAAVLK 446


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  221 bits (562), Expect(3) = 4e-68
 Identities = 100/272 (36%), Positives = 162/272 (59%)
 Frame = +1

Query: 52   LMEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFS 231
            +MEY +R L   + +  FN+H +C+KLG+THL FADD+LLF R DV SV ++    N FS
Sbjct: 483  MMEYLNRLLVKLQLDLNFNHHAKCEKLGITHLTFADDVLLFCRGDVMSVEMMLHVINKFS 542

Query: 232  EASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPL 411
              +GL  N  K ++   GVD  T+++I  +  YE G+LP +YLG+PL++K+L +    PL
Sbjct: 543  ATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIKYYLPL 602

Query: 412  VGKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWT 591
            + KI  +I  W +K     GR+Q++   +  +  +W +   +P  VIK I++ C +++W+
Sbjct: 603  IDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWS 662

Query: 592  GEATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTR 771
                IT+++ +AW  +C PKG GG  I NL++ N   +   LW LC+  + LW+  +H  
Sbjct: 663  RSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAH 722

Query: 772  YIKGQHVHTMVNPKQASWMIRKIISIRKYSNT 867
            YIK   V   +     SW+++ ++S R+Y +T
Sbjct: 723  YIKNSSVMNTMVTNNFSWVLKNVLSQREYIHT 754



 Score = 54.3 bits (129), Expect(3) = 4e-68
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +2

Query: 875  KFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEA 1054
            +F M  AY +   +A  V W  L+ +N   P+ +   WL  H +L T   L+++GM  + 
Sbjct: 767  RFKMKKAYDKMM-EADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDK 825

Query: 1055 PCVFCHAEPETKEHL*FGCTFTQDIWKGIL 1144
                C    ET+ H+ F C    DIW  +L
Sbjct: 826  IWSLCKEVEETQNHILFSCKVATDIWSNVL 855



 Score = 33.1 bits (74), Expect(3) = 4e-68
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 1230 RGVILKASYAAVIYGIWIERNTSIF 1304
            R  +LK S    IYGIWI RN+ IF
Sbjct: 884  RAYLLKLSVTETIYGIWINRNSKIF 908


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  261 bits (666), Expect = 7e-67
 Identities = 122/244 (50%), Positives = 170/244 (69%)
 Frame = +1

Query: 55   MEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSE 234
            MEY  R L   K +  F YHP+  KL +THLCFADDLLLF+R D+ S+  L++ F  FS+
Sbjct: 464  MEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQ 523

Query: 235  ASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLV 414
            ASGL+AN+ KS +   GV    R +I+  L Y + ELPFKYLG+PLS+K+L  +Q  PL+
Sbjct: 524  ASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLI 583

Query: 415  GKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTG 594
             K++ +I +W AK  +YAGR QL+K VLF VQA W +LF++P K+IK+IE  C +YLW+G
Sbjct: 584  EKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSG 643

Query: 595  EATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRY 774
               +TK+A++AW+K+C PK  GG  ++NL++ N +A+ KL W L   ++KLWI  +H  Y
Sbjct: 644  VGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYY 703

Query: 775  IKGQ 786
            IKGQ
Sbjct: 704  IKGQ 707


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  222 bits (566), Expect(2) = 1e-62
 Identities = 98/271 (36%), Positives = 171/271 (63%)
 Frame = +1

Query: 52  LMEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFS 231
           +MEY +R +   +  P FN+H +C++LG+THL FADD+ L  R D  S+ ++ + F+ FS
Sbjct: 144 MMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFS 203

Query: 232 EASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPL 411
           +++GL+ N AK +V   G++  +   I  +  +E G LP +YLG+PLS K+L V    PL
Sbjct: 204 KSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPL 263

Query: 412 VGKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWT 591
           V KI+ KI  W +K  + AGR+QL++ ++  +  YW  +F +PKKVI+ I++ C +++W+
Sbjct: 264 VEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWS 323

Query: 592 GEATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTR 771
           G A + ++++VAW+++C P   GG  ++NL L N  A+ K LW +C  ++ LW+  +H  
Sbjct: 324 GSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAY 383

Query: 772 YIKGQHVHTMVNPKQASWMIRKIISIRKYSN 864
           ++KG +V +      ++W+++ ++  R   N
Sbjct: 384 FLKGDNVMSATIKSNSTWILKSVMKQRPQVN 414



 Score = 46.6 bits (109), Expect(2) = 1e-62
 Identities = 26/91 (28%), Positives = 39/91 (42%)
 Frame = +2

Query: 860  VIQRGKFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWG 1039
            ++++ KF M   Y     D   + W +L+  N   P+    LWL    +L T   L    
Sbjct: 423  MLRKRKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMN 482

Query: 1040 MNVEAPCVFCHAEPETKEHL*FGCTFTQDIW 1132
            M   + C  C  + E  +HL F C  T+ IW
Sbjct: 483  MIQCSLCSLCKEQDEDLDHLMFSCRVTKAIW 513


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  174 bits (442), Expect(2) = 1e-54
 Identities = 93/257 (36%), Positives = 140/257 (54%), Gaps = 3/257 (1%)
 Frame = +1

Query: 100 EFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCI 279
           +F YH RC++L LTHL FADDL++ +   V S+  + E F++F++ SGLK +M KS + +
Sbjct: 213 KFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYL 272

Query: 280 DGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQ 459
            GV E     I     +++G+LP +YLG+PL TKRLT     PL+  I  KI TW  +  
Sbjct: 273 AGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYL 332

Query: 460 AYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKI 639
           +YAGRL LI  VL+ +  +W   F LP++ I+ I+  C  +LW+G     ++  V W  +
Sbjct: 333 SYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDV 392

Query: 640 CLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQ---HVHTMVNP 810
           C PK  GG  + +L+  N  +  KL+W +  H   LW+  +    +K      V T  N 
Sbjct: 393 CKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTTTNM 452

Query: 811 KQASWMIRKIISIRKYS 861
               W  R    + K+S
Sbjct: 453 DSVLWRGRNDEYMPKFS 469



 Score = 67.4 bits (163), Expect(2) = 1e-54
 Identities = 32/104 (30%), Positives = 49/104 (47%)
 Frame = +2

Query: 875  KFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEA 1054
            KF     + + R  +  V W   IW     PK+ F  WL +  +L T   +L+W   +  
Sbjct: 467  KFSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSP 526

Query: 1055 PCVFCHAEPETKEHL*FGCTFTQDIWKGILK*QKRQGGSHDWYT 1186
             CV C+   ET+ HL F C +T +IW+ + K   +   S +W T
Sbjct: 527  TCVLCNNNIETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWST 570


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  196 bits (498), Expect = 2e-47
 Identities = 103/253 (40%), Positives = 142/253 (56%)
 Frame = +1

Query: 97   PEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVC 276
            P F YH RC +L L+HLCFADDLL+F   D  SV  L + F+ F   S LKAN+++S++ 
Sbjct: 507  PCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIF 566

Query: 277  IDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKC 456
            + GVD ++   +L V ++ LG  P +YLGIPL T +L +  C PL+ +I  +I +W  K 
Sbjct: 567  LAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKV 626

Query: 457  QAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEK 636
             ++AGRLQLI+ VL  +Q YW    +LPKKV+K IE     +LW G  +      VAW +
Sbjct: 627  LSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSE 686

Query: 637  ICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTMVNPKQ 816
            ICLPK  GG  I +L   N A +   +W L       W   V    +KG        P  
Sbjct: 687  ICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSI 746

Query: 817  ASWMIRKIISIRK 855
             SW  RK++ IR+
Sbjct: 747  CSWNWRKLLKIRE 759


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  186 bits (473), Expect = 2e-44
 Identities = 97/264 (36%), Positives = 151/264 (57%), Gaps = 1/264 (0%)
 Frame = +1

Query: 103 FNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCID 282
           F +HP+C+ LGLTHLCFADDL++     V SV  + E  N+F++ SGL+ NM K+ +   
Sbjct: 92  FGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTA 151

Query: 283 GVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQA 462
           GV +H R  +++   + LG+LP +YLG+PL TKRLT     PL  +I  +I TW ++  +
Sbjct: 152 GVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLS 211

Query: 463 YAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKIC 642
           +AGRL LI  VL+    +W   F LP   +K I + C  +LW+G     ++A V+W+ IC
Sbjct: 212 FAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDIC 271

Query: 643 LPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTMV-NPKQA 819
            PK  GG  + +L   N  ++ KL+W +  + + LW+       +K +   ++  N    
Sbjct: 272 KPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLG 331

Query: 820 SWMIRKIISIRKYSNTKR*VSHVQ 891
           SWM +K++   KY  T +  S V+
Sbjct: 332 SWMWKKML---KYRETAKPFSRVE 352



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 31/87 (35%), Positives = 41/87 (47%)
 Frame = +2

Query: 926  VPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEAPCVFCHAEPETKEHL*F 1105
            V W K +W +   PKY F  WL L  +L T   +  W    +  C FC    ET++HL F
Sbjct: 460  VAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFF 519

Query: 1106 GCTFTQDIWKGILK*QKRQGGSHDWYT 1186
             C++   IW  I K   +   S DW T
Sbjct: 520  SCSYASAIWTAIAKNVLQHRFSTDWQT 546


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  184 bits (467), Expect = 8e-44
 Identities = 92/251 (36%), Positives = 143/251 (56%), Gaps = 1/251 (0%)
 Frame = +1

Query: 103 FNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCID 282
           F YHPRC+++GLTHL FADDL++ +   V S+  + E F  F++ SGL+ +M KS V   
Sbjct: 69  FGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFA 128

Query: 283 GVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQA 462
           G+   +   ++    + +G LP +YLG+PL TK+L+     PL+  I  KI +W A+  +
Sbjct: 129 GLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLS 188

Query: 463 YAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKIC 642
           YAGRL LI  VL+ +  +W   F LP++ I+ I+  C  YLW+G    T +A +AW  +C
Sbjct: 189 YAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVC 248

Query: 643 LPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTM-VNPKQA 819
            PK  GG  + +L+  N  +  KL+W +  H + LW+  +H   +K      +  N    
Sbjct: 249 KPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVRENTSLG 308

Query: 820 SWMIRKIISIR 852
           SWM +K++  R
Sbjct: 309 SWMWKKVLKFR 319


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score =  183 bits (464), Expect = 2e-43
 Identities = 92/257 (35%), Positives = 144/257 (56%), Gaps = 1/257 (0%)
 Frame = +1

Query: 100 EFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCI 279
           +F YHPRC+++GLTHL FADDL++ +   V S+  + + F+ F++ S LK +M KS V +
Sbjct: 16  KFGYHPRCKQIGLTHLSFADDLMVLSDGKVRSIEGIVDVFDTFAKCSDLKISMEKSTVYL 75

Query: 280 DGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQ 459
            G+   TR  ++    + +G LP +YLG+PL TK+ +     PL+  I  KI +W A+  
Sbjct: 76  AGLSHTTRQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKICSWSARFL 135

Query: 460 AYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKI 639
           +Y GRL LI  +L+ +  +W   F LP+  I+ I+  C  YLW+G    T +A +AW  +
Sbjct: 136 SYTGRLNLISSILWSICNFWMGAFRLPRDCIREIDKMCSAYLWSGGELNTSKAKIAWAFV 195

Query: 640 CLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTM-VNPKQ 816
           C PK  GG  + +L+  N     KL+W +  H + LW+  + +  +K      +  N   
Sbjct: 196 CKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTSL 255

Query: 817 ASWMIRKIISIRKYSNT 867
            SWM RKI+  R  + T
Sbjct: 256 GSWMWRKILKFRDIART 272


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  182 bits (461), Expect = 4e-43
 Identities = 100/280 (35%), Positives = 154/280 (55%), Gaps = 1/280 (0%)
 Frame = +1

Query: 55   MEY*HRCLAAFKNEPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSE 234
            ME   + L        F +HP+C+ LGLTHLCFADDL++     V SV  + E  N+F++
Sbjct: 588  MEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAK 647

Query: 235  ASGLKANMAKSQVCIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLV 414
             SGLK NM K+ +   GV +H R  +++   + L +LP +YLG+PL TKRLT     PL 
Sbjct: 648  RSGLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLF 707

Query: 415  GKIILKITTWMAKCQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTG 594
             +I  +I TW ++  ++AGRL LI  VL+    +W   F LP   +K I + C  +LW+G
Sbjct: 708  EQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSG 767

Query: 595  EATITKRAMVAWEKICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRY 774
                 ++A V+W+ IC PK  GG  + +L   N  ++ KL+W +  + + LW+       
Sbjct: 768  PELNRRKAKVSWDDICKPK-QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNL 826

Query: 775  IKGQHVHTM-VNPKQASWMIRKIISIRKYSNTKR*VSHVQ 891
            +K +   ++  N    SWM +K++   KY  T +  S V+
Sbjct: 827  LKQESFWSLKPNSSLGSWMWKKML---KYRETAKPFSRVE 863


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  181 bits (458), Expect = 9e-43
 Identities = 95/254 (37%), Positives = 148/254 (58%), Gaps = 1/254 (0%)
 Frame = +1

Query: 94   EPEFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQV 273
            E + +YHPRC+ + LTHLCFADD+++F+     S+      F  F+  S LK ++ KS +
Sbjct: 831  EKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTI 890

Query: 274  CIDGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAK 453
             + G+  + ++ IL    +ELG LP KYLG+PL TKR+T     PLV KI  +IT+W  +
Sbjct: 891  FMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNR 950

Query: 454  CQAYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWE 633
              ++AGRLQLIK VL  +  +W  +F LPK  ++ IE     +LW+G    TK+A +AW 
Sbjct: 951  FLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWS 1010

Query: 634  KICLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTM-VNP 810
            ++C  K  GG  +  L+  N  ++ KL+W +   ++ LW+  V+   I+ +   ++  N 
Sbjct: 1011 EVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENT 1070

Query: 811  KQASWMIRKIISIR 852
               SW+ RKI+  R
Sbjct: 1071 GLGSWLWRKILKQR 1084



 Score = 70.1 bits (170), Expect(2) = 2e-09
 Identities = 29/93 (31%), Positives = 46/93 (49%)
 Frame = +2

Query: 869  RGKFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNV 1048
            +  F  S  + + R  +    W + +W +   PKY F+ WL  H +L T+  + KW    
Sbjct: 1182 KSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWNSGA 1241

Query: 1049 EAPCVFCHAEPETKEHL*FGCTFTQDIWKGILK 1147
               CVFC  E ET++HL F C ++  +W  + K
Sbjct: 1242 RYDCVFCGEELETRDHLFFSCPYSSHVWFSLTK 1274



 Score = 20.4 bits (41), Expect(2) = 2e-09
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 1242 LKASYAAVIYGIWIERN 1292
            L+ ++ A I+ +W ERN
Sbjct: 1305 LRYAFQASIHSLWRERN 1321


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  179 bits (455), Expect = 2e-42
 Identities = 90/263 (34%), Positives = 147/263 (55%)
 Frame = +1

Query: 100 EFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCI 279
           +F YHP+C+ LGLTHL FADD+++     + S+  + E F+ F++ SGLK +MAK+ +  
Sbjct: 204 KFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYF 263

Query: 280 DGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQ 459
            G+ +           + +G LP +YL +PL TKR T     PL+ +I  +I TW A+  
Sbjct: 264 AGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFL 323

Query: 460 AYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKI 639
           +YAGRL L+  VL+ +  +W   F LP++ ++ I+  C  +LW+G    T +A +AWE +
Sbjct: 324 SYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETV 383

Query: 640 CLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTMVNPKQA 819
           C PK  GG  + +++  N     KL+W +    + LW+  + T  +K     +  +  Q 
Sbjct: 384 CRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQG 443

Query: 820 SWMIRKIISIRKYSNTKR*VSHV 888
           SWM +K++   KY +T +  S V
Sbjct: 444 SWMWKKLL---KYRDTAKAFSKV 463


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  179 bits (454), Expect = 3e-42
 Identities = 85/256 (33%), Positives = 145/256 (56%), Gaps = 1/256 (0%)
 Frame = +1

Query: 103  FNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCID 282
            F YHP+C+ +GLTHL FADDL++ +   + S+  + + F+ F++ SGL+ ++ KS V + 
Sbjct: 687  FGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLA 746

Query: 283  GVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQA 462
            G+    R+ +     +  G+LP +YLG+PL TKRL+   C PL+ ++  +I +W ++  +
Sbjct: 747  GLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLS 806

Query: 463  YAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKIC 642
            YAGRL LI  VL+ +  +W   F LP+K I+ +E  C  +LW+G    + +A ++W  +C
Sbjct: 807  YAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVC 866

Query: 643  LPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHV-HTMVNPKQA 819
             PK  GG  + +L+  N     KL+W +  H   LW+  V    ++            Q 
Sbjct: 867  KPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQG 926

Query: 820  SWMIRKIISIRKYSNT 867
            SW+ +K++  R+ + T
Sbjct: 927  SWIWKKLLKYREVAKT 942



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
 Frame = +2

Query: 869  RGKFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNV 1048
            R  F     +   R  +  VPW K+IW +   PKY F  WL  H +L T   ++ W   +
Sbjct: 1035 RTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGI 1094

Query: 1049 EAPCVFCHAEPETKEHL*FGCTFTQDIW----KGILK*QKRQGGSHDWYTEWQGVMQ 1207
               C+FC    ET++HL F C+FT  IW    +GI K Q        + + WQ +++
Sbjct: 1095 ATDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQ--------YTSHWQSIIE 1143


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  179 bits (454), Expect = 3e-42
 Identities = 89/250 (35%), Positives = 149/250 (59%), Gaps = 2/250 (0%)
 Frame = +1

Query: 109 YHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCIDGV 288
           YHP C+++GLTHL FADDL++       S+  + E F++FS+ SGLK +M KS +   G+
Sbjct: 242 YHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGL 301

Query: 289 DEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQAYA 468
              +R+++ T   +E+GELP +YLG+PL TKRL+ +   PL+ +I  +I +W ++  ++A
Sbjct: 302 SSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFA 361

Query: 469 GRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKICLP 648
           GR  LI  +++    +W   F LP+  I+ IE  C ++LW+G    +K+A ++W ++C P
Sbjct: 362 GRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKP 421

Query: 649 KGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTMV--NPKQAS 822
           K  GG  + +L+  N     KL+W +  H + LW+  V    +K + +  +V  N    S
Sbjct: 422 KSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLK-REIFWIVKENANLGS 480

Query: 823 WMIRKIISIR 852
           W+ +KI+  R
Sbjct: 481 WIWKKILKYR 490



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 39/81 (48%)
 Frame = +2

Query: 863  IQRGKFHMSSAY*RHRGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGM 1042
            I + KF   + +   R  +  V W K +W     PKY F LWL  H++L T   ++KW  
Sbjct: 588  IYKDKFSTKNTWNYLRTTSNEVAWHKGVWFPHATPKYSFCLWLAAHDRLATGARMIKWNR 647

Query: 1043 NVEAPCVFCHAEPETKEHL*F 1105
                 C FC    ET++HL F
Sbjct: 648  GETGDCTFCRQGIETRDHLFF 668


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  178 bits (452), Expect = 4e-42
 Identities = 89/252 (35%), Positives = 148/252 (58%), Gaps = 1/252 (0%)
 Frame = +1

Query: 100  EFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCI 279
            +F +HP+CQ+LGLTHL FADDL++ +     S+  + E F+ F + SGL+ ++ KS + +
Sbjct: 333  KFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYM 392

Query: 280  DGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQ 459
             GV    +  I     +++G+LP +YLG+PL TKRLT     PL+ +I  +I TW  +  
Sbjct: 393  AGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFF 452

Query: 460  AYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKI 639
            ++AGR  LIK VL+ +  +W   F LP++ I+ I+  C ++LW+G    + +A ++W+ +
Sbjct: 453  SFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIV 512

Query: 640  CLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTM-VNPKQ 816
            C PK  GG  + NL+  N  +  KL+W +  +   LW   V    I+ + + ++  +   
Sbjct: 513  CKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSM 572

Query: 817  ASWMIRKIISIR 852
             SW+ RKI+ IR
Sbjct: 573  GSWIWRKILKIR 584



 Score = 64.3 bits (155), Expect(2) = 2e-08
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
 Frame = +2

Query: 854  NTVIQRGKF-----HMSSAY*RH--RGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLR 1012
            +TV+ RGK      H S+    H  +  +  V W K +W     PKY    WL +H +L 
Sbjct: 670  DTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLP 729

Query: 1013 TNGLLLKWGM--NVEAPCVFCHAEPETKEHL*FGCTFTQDIWKGILK 1147
            T   +LKW    +V   CV C    +T EHL F C++   +W  + K
Sbjct: 730  TGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAK 776



 Score = 22.3 bits (46), Expect(2) = 2e-08
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 1233 GVILKASYAAVIYGIWIERN 1292
            G + +  + A IY +W ERN
Sbjct: 804  GFLTRYIFQATIYHVWRERN 823


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  178 bits (452), Expect = 4e-42
 Identities = 92/254 (36%), Positives = 141/254 (55%), Gaps = 1/254 (0%)
 Frame = +1

Query: 109  YHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCIDGV 288
            YHP+C+K+GLTHLCFADDL++F      S+  +   F  F+  SGL+ ++ KS + + GV
Sbjct: 986  YHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGV 1045

Query: 289  DEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQAYA 468
                R + L+   +  G+LP +YLG+PL TK++T     PL+  +  KI++W A+  +YA
Sbjct: 1046 SASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYA 1105

Query: 469  GRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKICLP 648
            GRL L+  V+  +  +W   + LP   I+ IE  C  +LW+G     K+A +AW  IC P
Sbjct: 1106 GRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQP 1165

Query: 649  KGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYI-KGQHVHTMVNPKQASW 825
            K  GG  I +L   N  +  KL+W L   +  LW+T + T  I KG            SW
Sbjct: 1166 KKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSW 1225

Query: 826  MIRKIISIRKYSNT 867
            M +K++  R+ + +
Sbjct: 1226 MWKKLLKYRELAKS 1239



 Score = 63.2 bits (152), Expect(2) = 2e-07
 Identities = 28/91 (30%), Positives = 41/91 (45%)
 Frame = +2

Query: 908  RGDAPIVPWRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEAPCVFCHAEPET 1087
            R   P   W K +W     PKY F+LWL +  +L T   +  W       C  C+   ET
Sbjct: 1346 RTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEET 1405

Query: 1088 KEHL*FGCTFTQDIWKGILK*QKRQGGSHDW 1180
            ++HL F C +T  +W+ + +       S DW
Sbjct: 1406 RDHLFFSCQYTSYVWEALTQRLLSTNYSRDW 1436



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 1254 YAAVIYGIWIERN 1292
            + A IY IW ERN
Sbjct: 1460 FQASIYHIWRERN 1472


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  177 bits (448), Expect = 1e-41
 Identities = 91/257 (35%), Positives = 146/257 (56%), Gaps = 1/257 (0%)
 Frame = +1

Query: 100  EFNYHPRCQKLGLTHLCFADDLLLFARVDVTSVILLKEKFNMFSEASGLKANMAKSQVCI 279
            EF YHPRC+ LGLTHLCFADDL++     + SV  + +  N F+   GLK  M K+ + +
Sbjct: 407  EFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYL 466

Query: 280  DGVDEHTRSRILTVLDYELGELPFKYLGIPLSTKRLTVLQCKPLVGKIILKITTWMAKCQ 459
             GV +H+R  + +   + +G+LP +YLG+PL TKRLT     PL+ +I  +I  W ++  
Sbjct: 467  AGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYL 526

Query: 460  AYAGRLQLIKVVLFVVQAYWFRLFLLPKKVIKMIEATCMNYLWTGEATITKRAMVAWEKI 639
            ++AGRL LI  VL+ +  +W   F LP++ I  I       LW+G     K+A V+W++I
Sbjct: 527  SFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEI 586

Query: 640  CLPKGAGGSKILNLRL*N*AAICKLLWALCQHKEKLWIT*VHTRYIKGQHVHTM-VNPKQ 816
            C PK  GG  + +LR  N  +  KL+W L   ++ LW+       +K +   ++  +   
Sbjct: 587  CKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTL 646

Query: 817  ASWMIRKIISIRKYSNT 867
             SW+ R+++  R+ + +
Sbjct: 647  GSWIWRRLLKHREVAKS 663



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 29/93 (31%), Positives = 45/93 (48%)
 Frame = +2

Query: 932  WRKLIWQNVPEPKYVFILWLCLHEKLRTNGLLLKWGMNVEAPCVFCHAEPETKEHL*FGC 1111
            W K +W     PK+ F  WL +  +L T   ++ W       CVFC +  ET++HL F C
Sbjct: 778  WHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQC 837

Query: 1112 TFTQDIWKGILK*QKRQGGSHDWYTEWQGVMQH 1210
             ++ +IW  I K   +   S    T+W  V+ +
Sbjct: 838  CYSSEIWTSIAKNVYKDRFS----TKWSAVVNY 866