BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041444
         (603 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234735.1| PREDICTED: enzymatic polyprotein-like [Solan...   102   1e-34
ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610...    52   7e-12
ref|XP_006595395.1| PREDICTED: uncharacterized protein LOC102664...    48   2e-11
gb|ACB28472.1| polyprotein [Ananas comosus]                            60   6e-11
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...    46   6e-09
ref|XP_002333429.1| predicted protein [Populus trichocarpa]            63   5e-08
ref|XP_002332257.1| predicted protein [Populus trichocarpa]            63   7e-08
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    51   1e-06
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...    45   2e-06
gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indi...    44   4e-06
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                 43   7e-06

>ref|XP_004234735.1| PREDICTED: enzymatic polyprotein-like [Solanum lycopersicum]
          Length = 817

 Score =  102 bits (253), Expect(2) = 1e-34
 Identities = 49/104 (47%), Positives = 72/104 (69%)
 Frame = +1

Query: 289 CDIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMISGSTMGKILRKR 468
           C +VLGN+ +KK NPT FDHE++ + IGKK N++VL  I E G LSM+S   M K+L+K 
Sbjct: 400 CALVLGNNWMKKHNPTKFDHEQRCVTIGKKTNKLVLPRIVEEGNLSMLSSEAMRKMLKKG 459

Query: 469 *VMMTHLFLLKVEHNQEQEVVDYVIQELMAKYEEVFVEPITQTP 600
             M+THLF++ +  + E+E VD V+QE++ KY  +F +P +  P
Sbjct: 460 QDMVTHLFMMNMVTSNEEEEVDEVLQEVLVKYSYIFTKPKSLPP 503



 Score = 70.9 bits (172), Expect(2) = 1e-34
 Identities = 35/74 (47%), Positives = 48/74 (64%)
 Frame = +3

Query: 48  LVSGIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPE 227
           LV G +K R+L +L+DSGSTHSFIDK T+    Y       +RVTV DGNY+ C+S   +
Sbjct: 319 LVGGTVKKRDLAILIDSGSTHSFIDKHTVTALVYQPCPCLPVRVTVADGNYVMCNSHRKD 378

Query: 228 FT*KMSGKTFKEEL 269
           F+ KM  + F ++L
Sbjct: 379 FSWKMQERIFTKDL 392


>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
          Length = 1274

 Score = 52.0 bits (123), Expect(2) = 7e-12
 Identities = 23/73 (31%), Positives = 41/73 (56%)
 Frame = +3

Query: 51  VSGIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEF 230
           + G IK + + +L+DSGSTH+F+D    K TG        + V V +G+ +  ++TC + 
Sbjct: 351 IKGNIKKKGIIILIDSGSTHNFLDVSVAKRTGCEVQQDKPLMVAVANGSKIASAATCKQL 410

Query: 231 T*KMSGKTFKEEL 269
              M G+ F+ ++
Sbjct: 411 VWSMQGREFRADM 423



 Score = 44.3 bits (103), Expect(2) = 7e-12
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
 Frame = +1

Query: 259 RRNLRIIKLL-CDIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMIS 435
           R ++R+I L  CD+VLG   + +  P  +D +   +    +G R+VL+     G L ++S
Sbjct: 420 RADMRLIPLGGCDMVLGIQWLSQLGPILWDFKNLWMEFKWEGRRMVLRG-STAGPLKLVS 478

Query: 436 GSTMGKILRK-R*VMMTHLFLLKVE---HNQEQEVV---DYVIQELMAKYEEVFVEPITQ 594
              M K L++   V   H+F L +E   ++   E++      +Q L+ KY  VF+EP   
Sbjct: 479 AVHMQKDLKQVPQVAAAHIFSLLLEPCINSTTSEIIIDEPAELQHLLKKYHGVFMEPKGL 538

Query: 595 TPP 603
            PP
Sbjct: 539 PPP 541


>ref|XP_006595395.1| PREDICTED: uncharacterized protein LOC102664095 [Glycine max]
          Length = 601

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 292 DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMISGSTMGKILRKR* 471
           ++VLG   +K   P   D+   T+    +GN + L+  PE   LS +S S   ++ + + 
Sbjct: 466 NVVLGVQWLKTLGPVLTDYTSLTMQFFYQGNLIKLQGDPEA-TLSSLSSSQFRRLCQTQP 524

Query: 472 V-MMTHLFLLKVEHNQEQEVVDYVIQELMAKYEEVFVEPITQTP 600
             +  H+ +L  EH+   E VD  IQ L+ KY  +F +P T  P
Sbjct: 525 SGLCFHITVLSEEHSTSSEPVDPSIQALLTKYNILFRQPQTLPP 568



 Score = 47.0 bits (110), Expect(2) = 2e-11
 Identities = 25/71 (35%), Positives = 37/71 (52%)
 Frame = +3

Query: 57  GIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT* 236
           G I    L LLVD GSTH+F+ +Q +   G     +  +RV V +G Y+ C+S C     
Sbjct: 387 GSISGHPLLLLVDGGSTHNFVQQQLVTHLGLPCRETAPLRVMVGNGQYLECTSICDAINI 446

Query: 237 KMSGKTFKEEL 269
            +  +TF  +L
Sbjct: 447 HIQNQTFIVDL 457


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 60.1 bits (144), Expect(2) = 6e-11
 Identities = 31/71 (43%), Positives = 40/71 (56%)
 Frame = +3

Query: 57  GIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT* 236
           G +KNR + +L+DSGSTH+F+D     + G        + VTV DGN +  SSTC  F  
Sbjct: 16  GTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTCRAFKW 75

Query: 237 KMSGKTFKEEL 269
           KM G  FK  L
Sbjct: 76  KMQGLEFKANL 86



 Score = 33.1 bits (74), Expect(2) = 6e-11
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 259 RRNLRIIKLL-CDIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMIS 435
           + NL ++ L  CD+VLG   +K+  P  +D  K  +    +G ++VL+    G  L +I 
Sbjct: 83  KANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQGQKIVLRG-SSGPSLKIIE 141

Query: 436 GSTMGKIL 459
           G  + K++
Sbjct: 142 GKQLKKMV 149


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score = 45.8 bits (107), Expect(2) = 6e-09
 Identities = 25/70 (35%), Positives = 38/70 (54%)
 Frame = +3

Query: 57  GIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT* 236
           G ++N  L +LVDSGSTHSFID +   +       +  I+V V DG+ ++C S  P  + 
Sbjct: 443 GWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQVADGSQLFCDSFLPNCSW 502

Query: 237 KMSGKTFKEE 266
              G +F  +
Sbjct: 503 WSQGHSFTSD 512



 Score = 40.4 bits (93), Expect(2) = 6e-09
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 292 DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAI-PEGGRLSMISGSTMGKILRKR 468
           D +LG D +++F+P   D   + IA    G  V L+ I P+      IS   +  + +K 
Sbjct: 522 DAILGMDWLEQFSPMQVDWVHKWIAFQHHGQAVQLQGIHPQLSTCFPISNDQLQGMSKKG 581

Query: 469 *VMMTHLFLLKVEHNQEQEVVDYVIQELMAKYEEVFVEPITQTPP 603
            VM   L  L V        V  ++Q ++ +++E+F EP T+ PP
Sbjct: 582 AVMC--LVHLNVAETLTATTVPEIVQPILNEFQEIFSEP-TELPP 623


>ref|XP_002333429.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +3

Query: 51  VSGIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEF 230
           + G  + +NL +L+DSGSTHSFI++ T+K        +T++ VTV +GN M C + CP F
Sbjct: 294 IKGNCQGQNLIILIDSGSTHSFINESTIKALNATTSKTTLLAVTVANGNVMLCETHCPAF 353

Query: 231 T*KMSGKTFKEEL 269
           T  M    FK  L
Sbjct: 354 TWFMHSYEFKSNL 366


>ref|XP_002332257.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = +3

Query: 51  VSGIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEF 230
           + G  + +NL +L+DSGSTHSFI++ T+K        +T++ VTV +GN M C   CP F
Sbjct: 294 IKGNCQGQNLIILIDSGSTHSFINESTIKALNATTSKTTLLAVTVANGNVMLCEKHCPAF 353

Query: 231 T*KMSGKTFKEEL 269
           T  M    FK  L
Sbjct: 354 TWFMHNYEFKSNL 366


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 51.2 bits (121), Expect(2) = 1e-06
 Identities = 25/73 (34%), Positives = 39/73 (53%)
 Frame = +3

Query: 51  VSGIIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEF 230
           V G +  R+L +L+DSGSTH+FID     + G H   + + +V V DG  +        F
Sbjct: 371 VKGTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVAVADGRKLNVDGQIKGF 430

Query: 231 T*KMSGKTFKEEL 269
           T K+   TF+ ++
Sbjct: 431 TWKLQSTTFQSDI 443



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
 Frame = +1

Query: 292 DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMISGSTMGKILRKR* 471
           D+VLG   ++     +++ +K  +    K  RV L  I  G  +  I    + K    + 
Sbjct: 452 DMVLGVQWLETLGRISWEFKKLEMQFFYKNQRVWLHGIITGS-VRDIKAHKLQKTQADQ- 509

Query: 472 VMMTHLFLLKVEHNQEQE-----------VVDYVIQELMAKYEEVFVEPITQTPP 603
           + +  + + +V  ++EQE           V + V+Q ++ ++ +VF EP T  PP
Sbjct: 510 IQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQNIVEEFPDVFAEP-TDLPP 563


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1619

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
 Frame = +1

Query: 268 LRIIKLLC-DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAI-PEGGRLSMISGS 441
           LR++ +   D++LG D + K +P + D   +TI +  +G  V L+ +  E     ++S +
Sbjct: 544 LRVLPITSYDMILGMDWLMKHSPMSVDWSLKTITLSLQGTTVTLQGVHSELAHCKILSAN 603

Query: 442 TMGKILRKR*VMMTHLF-LLKVEHNQEQEVVDYVIQELMAKYEEVFVEP 585
            M +  +++ V   H+  L  +  + E E +   +QELM ++  VF EP
Sbjct: 604 EMQQFQQRKAV--AHMVQLCSITDDVEPETIPVPVQELMQEFTTVFAEP 650



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 57  GIIKNRNLTLLVDSGSTHSFIDKQTMKE-TGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT 233
           G ++ + L +LVDSGS+ SFI  Q  +  TG   + S  + V V +G  + C +  P   
Sbjct: 474 GQLQGKELLVLVDSGSSVSFISSQIAEGLTGIQPL-SRRLSVRVANGETLCCGAIIPNCE 532

Query: 234 *KMSGKTFKEEL 269
            ++ G  F+  L
Sbjct: 533 WQVQGHKFQTTL 544


>gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
          Length = 471

 Score = 44.3 bits (103), Expect(2) = 4e-06
 Identities = 24/70 (34%), Positives = 38/70 (54%)
 Frame = +3

Query: 60  IIKNRNLTLLVDSGSTHSFIDKQTMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT*K 239
           +++N+ L LLVDSGS+HSF+D    +  G          V V +G+ + C    P+FT  
Sbjct: 48  LVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIAPFLVKVANGDCIPCQFVVPQFTWW 107

Query: 240 MSGKTFKEEL 269
             G+TF  ++
Sbjct: 108 FQGRTFTYDM 117



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 20/104 (19%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 292 DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAIPEGGRLSMISGSTMGKILR-KR 468
           D +LG D + ++   + +  K+T+    +G  V L+ +P+    + +S  ++ ++L+  +
Sbjct: 126 DAILGMDWLAQWGDMSCNWAKKTLKFMYQGTWVELQGVPDSPSKTKLSAMSLSQVLKCHK 185

Query: 469 *VMMTHLFLLKVEHNQEQEVVDYVIQELMAKYEEVFVEPITQTP 600
              +    LL+   +   + V   + +L+ ++ +VF +P +  P
Sbjct: 186 GCDIWVAALLETADSPSSDSVPPAVSQLVHEFADVFQDPHSLPP 229


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score = 42.7 bits (99), Expect(2) = 7e-06
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +3

Query: 57  GIIKNRNLTLLVDSGSTHSFIDKQ-TMKETGYH*IYSTIIRVTVVDGNYMYCSSTCPEFT 233
           G I++  L +LVDSGSTHSFID + +++  G H +  T + V + DG  M C+       
Sbjct: 426 GWIQDMELLMLVDSGSTHSFIDSEVSLRLPGVHKL-QTPLTVRIADGGTMKCTHEISSCN 484

Query: 234 *KMSGKTF 257
             M G  F
Sbjct: 485 WWMQGNQF 492



 Score = 33.1 bits (74), Expect(2) = 7e-06
 Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +1

Query: 292 DIVLGND*IKKFNPTTFDHEKQTIAIGKKGNRVVLKAI-PEGGRLSMISGSTMGKILRKR 468
           DI+LG D ++ F+P   D   + +    +G  V L+ I P+  + S I+   +  +   R
Sbjct: 505 DIILGMDWLELFSPMQVDWANKWMEFLYQGKLVRLQGILPKSVQCSSITNHQLCGL--NR 562

Query: 469 *VMMTHLFLLKVEHNQEQEVVDYVIQELMAKYEEVFVEP 585
              +++L  L+   ++E   V   ++E++  + ++F EP
Sbjct: 563 LGSLSYLVQLQSVTHEENSSVPEAVKEIIQDFHDIFQEP 601