BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041418
         (780 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]              166   1e-38
ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A...   162   2e-37
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   122   1e-25
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...   119   9e-25
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   115   1e-23
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...   114   3e-23
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   114   4e-23
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...   114   4e-23
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   112   1e-22
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   111   2e-22
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...   110   7e-22
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...   110   7e-22
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   108   2e-21
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   107   6e-21
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...   105   1e-20
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   104   3e-20
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A...   103   5e-20
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   102   1e-19
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   100   7e-19
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    98   3e-18

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  166 bits (419), Expect = 1e-38
 Identities = 94/255 (36%), Positives = 137/255 (53%)
 Frame = +1

Query: 1    QKKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQ 180
            QKK     +EN   WN+K+ L + FP+ +I  SW ++ + VE L P  K   ++W     
Sbjct: 693  QKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNI 752

Query: 181  EKIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCK 360
              +K+N DGSF   S   G+G I+R+    +IMAFSIP  C SNN AEALA  FG+ WC 
Sbjct: 753  NCVKINTDGSF--SSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCL 810

Query: 361  QRNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGISIQFSHYFREANIIAD 540
            Q+  +N ++ELDS+++ +M+ N    N                ++ + +H +REAN +AD
Sbjct: 811  QQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVAD 870

Query: 541  FMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKRYEKCNFFIS*LDCCMERD 720
             +AK A       +YH   ++P  A G   LDK Q+P+++ RY+K NFF   +D      
Sbjct: 871  ALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDKSNFFKYYVD------ 924

Query: 721  LYRLSLFLKIVLSIF 765
              RL L LK V   F
Sbjct: 925  --RLDLVLKWVTGGF 937


>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 207

 Score =  162 bits (409), Expect = 2e-37
 Identities = 83/190 (43%), Positives = 110/190 (57%)
 Frame = +1

Query: 124 ERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDC 303
           ER+ P+ K T + W       IK+N DGSF  E    GIGGI RN  G+++MAFSIP+ C
Sbjct: 18  ERIKPIQKLTQVKWSTPQIGTIKVNTDGSFLWEIGSAGIGGIARNSNGEMVMAFSIPVAC 77

Query: 304 ESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXX 483
            SNN AEALA EFG  WC Q+ L N  +ELDS II NM+ N+  +N              
Sbjct: 78  TSNNMAEALAAEFGGKWCSQQGLTNFTLELDSMIIVNMVNNKSNNNLKLRQIIDNIVEIV 137

Query: 484 XGISIQFSHYFREANIIADFMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKK 663
              + Q +H FRE+N +ADF+AK A+      +  S   LP  AKG   LDK Q+P ++ 
Sbjct: 138 DQSNAQVTHCFRESNQVADFLAKRAARLNQMMILTSFRQLPEMAKGSSFLDKCQMPCIRT 197

Query: 664 RYEKCNFFIS 693
           +++K NFF+S
Sbjct: 198 KFDKANFFVS 207


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score =  122 bits (306), Expect = 1e-25
 Identities = 69/222 (31%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
 Frame = +1

Query: 4   KKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQE 183
           K  S+Y++E+    +I  ++   +PNI  + SW  + + VE+    LK T + WE+  + 
Sbjct: 159 KPSSIYRVESGIFKDIMQIIKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEG 218

Query: 184 KIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQ 363
             KLN DGS    + + G GGI+R+ +G LI AF+IP+   +NN AE  A   GL WC+Q
Sbjct: 219 IHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQ 278

Query: 364 RNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGISI-QFSHYFREANIIAD 540
                I +E+DS+++   +IN+ +                  + + Q  H +REAN  AD
Sbjct: 279 HGFEKIILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCKHIYREANGTAD 338

Query: 541 FMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
            +AK + S  +   +++   L G  KG  +L+K  +   ++R
Sbjct: 339 LLAKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQLFRRR 380


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score =  119 bits (299), Expect = 9e-25
 Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
 Frame = +1

Query: 58  VLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDG 237
           +L +AFP+I+  GSW  +    E     ++ + + W + +++ IK+N DGS      + G
Sbjct: 126 MLKMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSALTNPGQTG 185

Query: 238 IGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANM 417
            GGI+R++EG ++MAF+ P+   +NN AEA AV FGL+W  +    NI IELD+Q++   
Sbjct: 186 AGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELDAQLVVKW 245

Query: 418 LINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADFMAKLASSCRLRTLYHSH 594
           +  +   +                  +   +H FREAN +AD ++K + +     +Y S+
Sbjct: 246 ITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHSHNIPAPQVYFSN 305

Query: 595 NNLPGEAKGLVLLDKWQLPTLKKRYEK 675
           N LP EA+    +D   +P+ +++  K
Sbjct: 306 NQLPREAQAYYQMDLRNMPSFRRKKTK 332


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  115 bits (289), Expect = 1e-23
 Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
 Frame = +1

Query: 4    KKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQE 183
            K  S+Y+++     NI  V+ + FP+I  + SW N+ + VE+     K   + W K    
Sbjct: 1224 KNSSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLG 1283

Query: 184  KIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQ 363
            K KLN DGS  + S + G GGI+R+ +G +I AFS+P    +NN AE  A   GL WC+Q
Sbjct: 1284 KYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQ 1343

Query: 364  RNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGISIQFS--HYFREANIIA 537
                 I +E+DS+++ N  IN   +                    QF   H +REAN  A
Sbjct: 1344 HGYKKIELEVDSKLLCNW-INSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTA 1402

Query: 538  DFMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
            D ++K + +  +   +++   L    +G  LL+K  +   ++R
Sbjct: 1403 DLLSKWSHNLEILQKFYTTRQLKEPIRGSYLLEKMGVQNFRRR 1445


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score =  114 bits (286), Expect = 3e-23
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
 Frame = +1

Query: 58  VLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDG 237
           +L +AFP+I    SW  +  T E+    +K   + W +  ++ IK+N DGS      + G
Sbjct: 96  MLKIAFPHIKWPASWTALIQTSEKCKHEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIG 155

Query: 238 IGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANM 417
            GGI+R+ EG +++AF+ P+   SNN AE  A  FGL+W  +    NI IELDSQ++   
Sbjct: 156 AGGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALELGYRNILIELDSQLVVQW 215

Query: 418 LINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADFMAKLASSCRLRTLYHSH 594
           +  +   +                  + + +H FREAN +AD ++K + +     +Y S 
Sbjct: 216 ISKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFREANWVADSLSKHSHNTTAPQVYFSS 275

Query: 595 NNLPGEAKGLVLLDKWQLPTLKKRYEK 675
             LP EA+    +D   +P+ +++  K
Sbjct: 276 TQLPKEAQAYYQMDLLNMPSFRRKKTK 302


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  114 bits (285), Expect = 4e-23
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
 Frame = +1

Query: 58   VLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDG 237
            +L  AFP I+  G+W  +  T ER    +K     W +  ++ IK+N DGS    +   G
Sbjct: 459  MLKSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCG 518

Query: 238  IGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANM 417
             GGIIR++EG +++AF+ P+   +NN AEA A  FGL+W  +    NI IELDSQ++   
Sbjct: 519  AGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQW 578

Query: 418  LINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADFMAKLASSCRLRTLYHSH 594
            +  +   +                  + + +H FREAN +AD ++K + +     +Y S+
Sbjct: 579  ISKKEPPHWNVINQIERIQQLIMQTQNFKCNHIFREANWVADALSKHSHTIATPQVYFSN 638

Query: 595  NNLPGEAKGLVLLDKWQLPTLKKRYEK 675
            + LP EA+    +D   +P  +++  K
Sbjct: 639  SQLPREAQAYYQMDLQNMPNFRRKKTK 665


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score =  114 bits (285), Expect = 4e-23
 Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
 Frame = +1

Query: 58  VLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDG 237
           +L  AFP+I+   +W  +  T E+    ++   + W K   + IK+N DGS      + G
Sbjct: 1   MLKNAFPSINWPANWTALIQTSEKCVHNIEVYKVAWFKPPDQWIKINTDGSALTNEGKIG 60

Query: 238 IGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANM 417
            GGIIR++EG +IMAFS P+   SNN AE  A  FGLTW  +    NI +ELDSQ++   
Sbjct: 61  AGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQW 120

Query: 418 LINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADFMAKLASSCRLRTLYHSH 594
           + N+                      + + SH FREAN +AD ++K + +     +Y   
Sbjct: 121 ISNKIAPPWNLTNQLERLQQIIIQTQNFRCSHIFREANWVADALSKHSHNNTAPQVYVHS 180

Query: 595 NNLPGEAKGLVLLDKWQLPTLKKRYEKCNF 684
           N LP EA     +D   +P+ +++  K  F
Sbjct: 181 NQLPKEAHAYYQMDLMDMPSFRRKKTKMIF 210


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score =  112 bits (280), Expect = 1e-22
 Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
 Frame = +1

Query: 7   KFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEK 186
           K+++YK   + L N       +FP+I+   +W  +  T E+    +K   + W K   + 
Sbjct: 246 KYAIYKDTFKMLKN-------SFPSINWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQW 298

Query: 187 IKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQR 366
           IK+N DGS      + G GGIIR++EG +IMAFS P+   SNN AE  A  FGLTW  + 
Sbjct: 299 IKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFEL 358

Query: 367 NLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADF 543
              NI +ELDSQ++   + N+                      + +  H FREAN +AD 
Sbjct: 359 GFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCCHIFREANWVADA 418

Query: 544 MAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKRYEKCNF 684
           ++K + +     +Y   N LP EA     +D   +P+ +++  K  F
Sbjct: 419 LSKHSHNNTAPHVYVHSNQLPKEAHAYYQMDLMDMPSFRRKKTKMIF 465


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  111 bits (278), Expect = 2e-22
 Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
 Frame = +1

Query: 1    QKKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQ 180
            +K+ S+++++      +  V+ + FP+I  + +W N+ + +E  S   K   + W K   
Sbjct: 1102 KKRSSIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPAL 1161

Query: 181  EKIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCK 360
               KLN DGS  + S + G GG +R+ +G ++ AFSIP    +NN AE  A  +G+ WC+
Sbjct: 1162 GTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCE 1221

Query: 361  QRNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGISIQ---FSHYFREANI 531
            Q     + +E++S+++ N + N  T                  + ++     H +REAN 
Sbjct: 1222 QHGYKKVELEVNSELLYNWIKN--TTKIPWRYEDLVQQIQQISMKMEQFHCHHIYREANN 1279

Query: 532  IADFMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
             AD ++K +++C +   +++   L G  KG  +L+K  +   ++R
Sbjct: 1280 TADLLSKWSNNCEIVQHFYTTRQLEGAIKGSYILEKMGVQNFRRR 1324


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score =  110 bits (274), Expect = 7e-22
 Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
 Frame = +1

Query: 7   KFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEK 186
           K+++YK   + L N        FP+I    +W  +  T E+    +K   + W +  +E 
Sbjct: 94  KYAIYKDTFKMLQN-------TFPHIKWPSNWTALYQTSEKCKHDIKVCKVAWNRPPEEW 146

Query: 187 IKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQR 366
           IK+N DGS      + G GGI+R+ EG L++AF+  +   SNN AE  A +FGL+W    
Sbjct: 147 IKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDL 206

Query: 367 NLNNIHIELDSQIIANMLINQGTDN-XXXXXXXXXXXXXXXGISIQFSHYFREANIIADF 543
           +  NI +E+DSQI+   +  + T +                    +  H FREAN  AD 
Sbjct: 207 DYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADS 266

Query: 544 MAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKRYEK 675
           ++K +       LY ++N +P EA+    +D   +P+ +++  K
Sbjct: 267 LSKHSHGTTGPQLYFNNNQMPKEAQAYYRMDLMNMPSFRRKKTK 310


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score =  110 bits (274), Expect = 7e-22
 Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
 Frame = +1

Query: 4    KKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQE 183
            K+ S+ K++         V+ + FPNI  + +W ++ + VE+   + K   + W K  Q 
Sbjct: 704  KQSSIQKVKYGISKETMQVIKLTFPNIPWQSNWESLINIVEQCKQLYKVNMVRWIKPKQH 763

Query: 184  KIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQ 363
              KLN +GS   ES + G GG++R+ +G LI AFS+P+   + N AE  A  FG+ WC+Q
Sbjct: 764  VYKLNTNGSALAESGKIGGGGVLRHHQGKLICAFSVPLGVGTYNFAELKAATFGIDWCEQ 823

Query: 364  RNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGISIQF---SHYFREANII 534
                +I +E+DS+II   + N  T                     Q+    H +REAN  
Sbjct: 824  HGYKSIELEVDSEIICQWINN--TIKPPWRCQHNVQQLLQTTSKFQYFHCKHIYREANNT 881

Query: 535  ADFMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
            AD +AK + +  +   +++   L G  +   +L+K  +   ++R
Sbjct: 882  ADLLAKWSHTMDIPQHFYTPQQLKGTIRESYMLEKMDIHNFRRR 925


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  108 bits (270), Expect = 2e-21
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
 Frame = +1

Query: 4    KKFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQE 183
            K  S+++++     ++  V+ + FP+I  + SW  + + VE      K   + W K    
Sbjct: 1031 KSSSIHRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLG 1090

Query: 184  KIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQ 363
              KLN DGS  + S + G GGI+R+ +G ++ AFS+P    +NN AE  A  +GL WC Q
Sbjct: 1091 TYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQ 1150

Query: 364  RNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIAD 540
                 + +E+DSQ++ N + N+                    I   Q  H +REANI AD
Sbjct: 1151 HGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANITAD 1210

Query: 541  FMAKLASSCRLRTLYHSHNNLPG 609
             ++K + S  L   +++   L G
Sbjct: 1211 LLSKWSHSLELVQHFYTKRQLEG 1233


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  107 bits (266), Expect = 6e-21
 Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
 Frame = +1

Query: 7    KFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEK 186
            K+++YK       N K++ N AFP+I     W  +  T E+     K   + W +  +E 
Sbjct: 553  KYAVYKD------NFKMMKN-AFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEW 605

Query: 187  IKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQR 366
            IK+N DGS        G GGIIRN+EG L+MAF+  +   SNN AE  A   GL    + 
Sbjct: 606  IKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALEL 665

Query: 367  NLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADF 543
               NI +ELDSQ+I   +  +   +                  + +  H FREAN +AD 
Sbjct: 666  GYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFREANWVADA 725

Query: 544  MAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKRYEK 675
            ++K +       LY   N LP EA     +D   +P+ ++R  K
Sbjct: 726  LSKHSHHITSPQLYFDSNQLPKEANAYYRMDLLNMPSFRRRKTK 769


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score =  105 bits (263), Expect = 1e-20
 Identities = 62/206 (30%), Positives = 103/206 (50%)
 Frame = +1

Query: 58  VLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDG 237
           +L +AFP ++  G+W  +  T ER    +K     W +  ++ IK+N DGS    +   G
Sbjct: 188 MLKIAFPRVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCG 247

Query: 238 IGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANM 417
            GGIIR++EG +++AF+ P+   +NN AEA A  FGL+W  +    NI IELDSQ++ + 
Sbjct: 248 AGGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVHW 307

Query: 418 LINQGTDNXXXXXXXXXXXXXXXGISIQFSHYFREANIIADFMAKLASSCRLRTLYHSHN 597
                                   IS +      EAN +AD ++K + +     +Y +++
Sbjct: 308 ------------------------ISKKEPPIGMEANWVADALSKHSHTIATPQVYFNNS 343

Query: 598 NLPGEAKGLVLLDKWQLPTLKKRYEK 675
            LP EA+    +D   +P  +++  K
Sbjct: 344 QLPREAQAYYQMDLQNMPNFRRKKTK 369


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  104 bits (260), Expect = 3e-20
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
 Frame = +1

Query: 67   VAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRESHRDGIGG 246
            VAFPNI  + +   + +  E     +K T + WEK +    KLN DGS     ++ G GG
Sbjct: 801  VAFPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGG 860

Query: 247  IIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQIIANMLIN 426
            I+R+  G LI AF+IP    +NN AE  A  +GL+WC+Q     I +E+DS++++  + N
Sbjct: 861  ILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWIDN 920

Query: 427  QGTDNXXXXXXXXXXXXXXXGIS-IQFSHYFREANIIADFMAKLASSCRLRTLYHSHNNL 603
                                 +   Q  H FREAN  AD +AK +    +   +++   L
Sbjct: 921  SINIPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLAKWSHQQDIVQHFYTQQQL 980

Query: 604  PGEAKGLVLLDKWQLPTLKKR 666
             G  +G  LL+K  + + ++R
Sbjct: 981  IGTIRGNYLLEKMGVQSFRRR 1001


>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 181

 Score =  103 bits (258), Expect = 5e-20
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
 Frame = +1

Query: 157 IYWEKSTQEKIKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAV 336
           + W K   + IK+N DGS      + G GGIIR++EG L+MAFS P+   SNN AE  A 
Sbjct: 2   VTWFKPPDQWIKINTDGSAIINEGKIGAGGIIRDKEGKLLMAFSTPLGEGSNNQAEIEAT 61

Query: 337 EFGLTWCKQRNLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHY 513
            FG+TW  +    NI +ELDSQ++   + N+                      + + SH 
Sbjct: 62  LFGMTWALELGFKNILLELDSQLVVQWISNKIAPQWSFTNQLERLHHIIMQTQNFKCSHI 121

Query: 514 FREANIIADFMAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKRYEKCNF 684
           FREAN +AD ++K + +     +Y + N LP EA+    +D   +P+ +++  K  F
Sbjct: 122 FREANWVADALSKHSHNTTAPQVYFNSNQLPKEAQAYYQMDLLNMPSFRRKKTKMIF 178


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  102 bits (255), Expect = 1e-19
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
 Frame = +1

Query: 13   SLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIK 192
            S+ +++     ++   + + FPNI  + SW  + + VE+    LK   + W K      K
Sbjct: 728  SIQRVQYGIFKDVMQTIKIVFPNIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYK 787

Query: 193  LNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNL 372
            LN DGS   ES + G GGI+R+  G L  AFSIP    +NN AE  A  +GL WC+Q   
Sbjct: 788  LNTDGSALPESGKIGGGGILRDYTGKLHYAFSIPFGLGTNNIAEMEAARYGLDWCEQHGY 847

Query: 373  NNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGIS-IQFSHYFREANIIADFMA 549
             +I +E+DS+I+   + N                     +   +  H +RE N  AD ++
Sbjct: 848  KSILLEVDSEILQKWISNTIAIPWRYQQTIEHIQDIGRKMDHFECQHVYREVNGTADLLS 907

Query: 550  KLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
            K +    +   +++   L G  +G  +LDK      ++R
Sbjct: 908  KWSHKLDILQHFYTSQQLIGSIRGSYILDKLGTQNFRRR 946


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  100 bits (248), Expect = 7e-19
 Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
 Frame = +1

Query: 46   NIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEKIKLNIDGSFCRES 225
            N K++ N AFP+I     W  +  T E+     K   + W +  +E IK+N DGS     
Sbjct: 560  NFKMMKN-AFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNP 618

Query: 226  HRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQRNLNNIHIELDSQI 405
             + G GGIIRN+EG L+MAF+  +   + N A+  A   GL    +    NI +ELDSQ+
Sbjct: 619  GKIGAGGIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQL 678

Query: 406  IANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADFMAKLASSCRLRTL 582
            I   +  +   +                  + +  H F+EAN +AD ++K         L
Sbjct: 679  IVQWISKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFKEANWVADALSKHNHHITSPQL 738

Query: 583  YHSHNNLPGEAKGLVLLDKWQLPTLKKRYEK 675
            Y   N LP EA     +D   +P+ ++R  K
Sbjct: 739  YFDSNQLPKEANAYYRMDLLNMPSFRRRKTK 769


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
 Frame = +1

Query: 7   KFSLYKLENQTLWNIKVVLNVAFPNIDIEGSWVNVCDTVERLSPVLKCTSIYWEKSTQEK 186
           K+++YK       N K++ N AFP+I+    W  +  T ER    +K   + W +  +E 
Sbjct: 86  KYAIYKD------NFKMMKN-AFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEW 138

Query: 187 IKLNIDGSFCRESHRDGIGGIIRNEEGDLIMAFSIPIDCESNNHAEALAVEFGLTWCKQR 366
           IK+N DGS      + G GGIIR+++G LI+AF+  +   SNN AE  A  FGL    + 
Sbjct: 139 IKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALEL 198

Query: 367 NLNNIHIELDSQIIANMLINQGTDNXXXXXXXXXXXXXXXGI-SIQFSHYFREANIIADF 543
              NI +ELDSQ++ + +  +   +                  + +  H  REAN +AD 
Sbjct: 199 GFKNIIMELDSQLVVHWINKKSAHHWSVANEIAKIQFLILQTQNFKCQHTLREANWVADS 258

Query: 544 MAKLASSCRLRTLYHSHNNLPGEAKGLVLLDKWQLPTLKKR 666
           ++K +       +Y +   LP  A+    +D   +P+ +++
Sbjct: 259 LSKHSHYTTSPQIYVNSTQLPKAAQAYYRVDLLNMPSFRRK 299