BLASTX nr result
ID: Atropa21_contig00041329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00041329
(1154 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 187 6e-47
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 194 7e-47
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 169 2e-44
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 152 3e-40
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 161 4e-37
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 161 4e-37
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 135 2e-30
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p... 138 5e-30
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 137 1e-29
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 133 2e-28
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 128 4e-27
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 126 1e-26
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 122 3e-25
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 120 1e-24
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 120 1e-24
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 119 2e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 119 2e-24
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 116 2e-23
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 115 3e-23
gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali... 115 3e-23
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 187 bits (475), Expect(2) = 6e-47
Identities = 97/237 (40%), Positives = 146/237 (61%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL+S +T C PL+E +T R ++W K LSY+GR+QLIK +L MQ YWA +F
Sbjct: 756 YLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFP 815
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
L KK+I+ +CR FLWTG E++K+A V+W + PK G N+++ WN+ + KL
Sbjct: 816 LSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKL 875
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDAIGELKK 621
LWAI K+D LWV+ I SYYIK +++ V + Q +++KI A+ N IG+ +
Sbjct: 876 LWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHLSN---IGDWDE 932
Query: 622 YTINREFVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRLS 792
I +F +KKAY +V+ + L ++ + FILW+++ ERL TV+R+S
Sbjct: 933 ICIGDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRIS 989
Score = 28.5 bits (62), Expect(2) = 6e-47
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +2
Query: 863 FYCAYSKYIWSSLLEWMQMSRHVRSWDEEIK*ISERAYRKRPQTEI*G*LFAACVYHVWI 1042
F C+YS +WS + M+ S E I + +A +K+ + + L+ VY +W
Sbjct: 1014 FSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQARKKKGKLIV--MLYTEFVYAIWK 1071
Query: 1043 KR--KEMQGDSHDIANRQTS*LETLPFNCISEDNIIL 1147
+R + G++ D L + C E+ +L
Sbjct: 1072 QRNKRTFTGENKDENEVLRKILFAVAAQCNDEERSLL 1108
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 194 bits (492), Expect = 7e-47
Identities = 119/356 (33%), Positives = 185/356 (51%), Gaps = 6/356 (1%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL+S + C PLI+++TTR + W LSY+GR+QL+K +L+ MQ YW Q+F
Sbjct: 759 YLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFP 818
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LPKK+IK + CR FLWTG+++ S +A V+WD L PK GLN+ + +WNK I KL
Sbjct: 819 LPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKL 878
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDAIGELKK 621
LWAI K+D LWV+ + +YYIK + + V V +++KIF +++ G +
Sbjct: 879 LWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELL---TRTGGWEA 935
Query: 622 YTINREFVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRLSGVF 801
+ + F IKK Y Y V K L ++ + FILWL + RLAT R+S
Sbjct: 936 VSNHMNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWN 995
Query: 802 Q*APTVCYTIHVQWSNLHILFLLCIL------KIHMEFTARMDANVKAC*KLG*RN*MNL 963
+ +C + + LF CI K+ + + A+ +A +L +
Sbjct: 996 RDVSPLCKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKK---- 1051
Query: 964 *EGL*KTTTDRDLRLVVCSLCLSRLDKKKRNARRFSRHSKSTNKLIRDIAFQLHIR 1131
++T DR+ V+ RNA+ F + N+ ++ I F++ +R
Sbjct: 1052 ----ARSTKDRNKLYVMMFTESVYAIWLLRNAKVFRGIEINQNQAVKSIIFRIAVR 1103
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 169 bits (427), Expect(2) = 2e-44
Identities = 86/236 (36%), Positives = 139/236 (58%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVP++S ++ PLI+++ +IK WT + LSY+GR+QL+ V+F + YW F
Sbjct: 142 YLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFP 201
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
PK +++ +ICRIFLWTG E S+++ V+W ++C P+ GLNI+D IWNK + KL
Sbjct: 202 FPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKL 261
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDAIGELKK 621
LW ++SK+D+LWVK IQ+YY+K EL + + +++ I ++ + + I +++
Sbjct: 262 LWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAILKQRE---DLEKIDNMEE 318
Query: 622 YTINREFVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRL 789
I + K Y + + K L + R +FILWL RL+T +RL
Sbjct: 319 LMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRL 374
Score = 38.5 bits (88), Expect(2) = 2e-44
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 863 FYCAYSKYIWSSLLEWMQMSRHVRSWDEEIK*ISERAYRKRPQTEI*G*LFAACVYHVW- 1039
F C SK +W +L+W+Q+ W E+ ++ K + + A +Y +W
Sbjct: 399 FVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYEIWN 458
Query: 1040 IKRKEMQGDSHDI 1078
I+ ++ G + DI
Sbjct: 459 IRNNKIFGQAIDI 471
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 152 bits (383), Expect(2) = 3e-40
Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 2/238 (0%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PLSS + IK LI+++ RI W+ LSY+GRVQLI+ V+F +W Q
Sbjct: 584 YLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLP 643
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LPK +I N+ICR FLW G+ S+++ ++W+K+C PK+ GLNI++ IWNK+ I KL
Sbjct: 644 LPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKL 703
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDAIGELKK 621
LW + +K D LW+K + +YYI+G+ + + + K ++ + + L +
Sbjct: 704 LWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRP---------LLLQ 754
Query: 622 YTINRE--FVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRL 789
Y + F +KK YL K+ + L ++ R F LW RLA+ +RL
Sbjct: 755 YQSRMQDVFKMKKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRL 812
Score = 41.6 bits (96), Expect(2) = 3e-40
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +2
Query: 839 NGAICTSC-------FYCAYSKYIWSSLLEWMQMSRHVRSWDEEIK*ISERAYRKRPQTE 997
N A C+S F C K IW+++L W+Q+ +W EE+ I+ + K +
Sbjct: 822 NCAFCSSMESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAM 881
Query: 998 I*G*LFAACVYHVWIKR 1048
+ F +YH+W R
Sbjct: 882 LLKCAFTETIYHIWAYR 898
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 161 bits (408), Expect = 4e-37
Identities = 85/266 (31%), Positives = 146/266 (54%), Gaps = 2/266 (0%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPLS + + +PL+E++ +I+ W++K LS +GR+QL++ ++ + YW VF
Sbjct: 245 YLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFP 304
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
+PKK+I+ +SICR F+W+GS E +++LV+W ++C P GLN+++ +WN + K
Sbjct: 305 MPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKC 364
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDA--IGEL 615
LW I SK+D LWVK I +Y++KG + + + +++ + + N I L
Sbjct: 365 LWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQVNNLQLVWIEML 424
Query: 616 KKYTINREFVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRLSG 795
+K R+F +K+ Y+ + + K+ L + R + LWL RLAT RL
Sbjct: 425 RK----RKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKN 480
Query: 796 VFQ*APTVCYTIHVQWSNLHILFLLC 873
+ ++C Q +L L C
Sbjct: 481 MNMIQCSLCSLCKEQDEDLDHLMFSC 506
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 161 bits (408), Expect = 4e-37
Identities = 73/144 (50%), Positives = 102/144 (70%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPLSS + PLIE++ RI SWT K LSY+GR QL+K VLF +Q WAQ+F+
Sbjct: 564 YLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFI 623
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
+P KIIKL +CR +LW+G +K+AL++WDK+C PK GL +++ IWN+ + KL
Sbjct: 624 IPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKL 683
Query: 442 LWAIASKKDTLWVK*IQSYYIKGR 513
W +A+K+D LW+K I +YYIKG+
Sbjct: 684 CWDLANKEDKLWIKWIHAYYIKGQ 707
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 135 bits (341), Expect(2) = 2e-30
Identities = 73/236 (30%), Positives = 126/236 (53%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL+S + IK +PLI+++TTRI+ WT+K L+ +GRVQ++ + + +W Q
Sbjct: 584 YLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLP 643
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
+P +IK +S+CR F+W+ S E ++++ ++W+ +C PK GLNI + +WN + +
Sbjct: 644 IPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNC 703
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC*LVQKIFGAQK*FGNQDAIGELKK 621
LW + K D LWVK I ++YIK + V +++ + ++ + + +
Sbjct: 704 LWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNVLSQREYIHTLQPVWD--E 761
Query: 622 YTINREFVIKKAYLNFLYLYPKVQ*KYLTMSHDILLRHHFILWLVV*ERLATVNRL 789
+ F +KKAY + +V L + R WL RL T +RL
Sbjct: 762 LLNSERFKMKKAYDKMMEA-DRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRL 816
Score = 24.6 bits (52), Expect(2) = 2e-30
Identities = 14/62 (22%), Positives = 26/62 (41%)
Frame = +2
Query: 863 FYCAYSKYIWSSLLEWMQMSRHVRSWDEEIK*ISERAYRKRPQTEI*G*LFAACVYHVWI 1042
F C + IWS++L + + + W E+ + RK + + +Y +WI
Sbjct: 842 FSCKVATDIWSNVLNRIGIDHVPQEWPLELDWLLNLTNRKGWRAYLLKLSVTETIYGIWI 901
Query: 1043 KR 1048
R
Sbjct: 902 NR 903
>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
[Medicago truncatula]
Length = 120
Score = 138 bits (347), Expect = 5e-30
Identities = 56/100 (56%), Positives = 81/100 (81%)
Frame = +1
Query: 145 RMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFLLPKKIIKLFNSICRIFLWTGS 324
R+ RI++W++KFLSY+GR+QLIK VLF +QTYW+QVF+LP+K++KL + CR+FLWTG
Sbjct: 21 RIIYRIENWSSKFLSYAGRLQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTACRVFLWTGK 80
Query: 325 IEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKLL 444
SKRAL++W+++C+PK G N++D +WN+ ICKLL
Sbjct: 81 SGTSKRALIAWERICLPKTAGGWNVIDLKVWNQAAICKLL 120
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 137 bits (344), Expect = 1e-29
Identities = 60/152 (39%), Positives = 90/152 (59%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL +S + ++ C PL++R+ TRIKSW K LS++GR+QLI+ VL +Q YWA +
Sbjct: 593 YLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLI 652
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LPKK++K R FLW G+ V+W ++C+PK GL I D H WNK ++
Sbjct: 653 LPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISH 712
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVP 537
+W + S W ++ Y +KG P+P
Sbjct: 713 IWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLP 744
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 133 bits (334), Expect = 2e-28
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL SS + C L++R+T++++ WT + LSY+GRVQLI VLF +Q YWA +FL
Sbjct: 58 YLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFL 117
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP ++IK I + FLW+GS ++ A V+WD++C+PK GL I WNK+ + K
Sbjct: 118 LPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKH 177
Query: 442 LWAIASKKD-TLWVK*IQSYYIKGRELNEVPVPK 540
+W + + D ++W I+S ++GR + P+
Sbjct: 178 IWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQ 211
>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Cucumis sativus]
Length = 647
Score = 128 bits (322), Expect = 4e-27
Identities = 62/149 (41%), Positives = 93/149 (62%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL S + C PLI+ +T+RI+SW+ + LS++ +QL++ VL +Q YWA VF+
Sbjct: 223 YLGLPLLSRRLRSSDCDPLIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFM 282
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP K+ K + I R +LW G E A V+WD++C+P GL I D WNK K+
Sbjct: 283 LPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSWNKASTLKI 342
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEV 528
LW + K +LWV +++Y +KGR L E+
Sbjct: 343 LWLLLVKSGSLWVAWVEAYILKGRSLWEI 371
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 126 bits (317), Expect = 1e-26
Identities = 60/146 (41%), Positives = 92/146 (63%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL + C PLI+R+T+RI+SW+ + LS++GR+QL++ VL +Q YWA VF+
Sbjct: 38 YLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFM 97
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP K+ + + I R +LW G E A V+WD++C+P GL I D WN K+
Sbjct: 98 LPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKI 157
Query: 442 LWAIASKKDTLWVK*IQSYYIKGREL 519
LW + K +LWV +++Y +KGR +
Sbjct: 158 LWLLLVKSGSLWVAWVEAYILKGRSM 183
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 122 bits (306), Expect = 3e-25
Identities = 57/132 (43%), Positives = 82/132 (62%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL + + I PL+E++T R +SW K LS++GR+QLI V+F +W FL
Sbjct: 764 YLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFL 823
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LPK IK S+C FLW+G+IE++K VSW LC+PK GL + WNK + +L
Sbjct: 824 LPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRL 883
Query: 442 LWAIASKKDTLW 477
+W + KD+LW
Sbjct: 884 IWRLFVAKDSLW 895
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 120 bits (300), Expect = 1e-24
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = +1
Query: 34 KLSSNFYASPRKSKP*-HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQL 210
+++S Y P + P +LG+PL + I PL+E+++ R++SW +K LS++GR QL
Sbjct: 607 RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQL 666
Query: 211 IKRVLFEMQTYWAQVFLLPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNG 390
I V+F + +W FLLPK IK S+C FLW GSI+ K + VSW C+PK G
Sbjct: 667 ISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGG 726
Query: 391 LNILDYHIWNKVVICKLLWAIASKKDTLWVK 483
L + WNK ++ +L+W + + +LW +
Sbjct: 727 LGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQ 757
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 120 bits (300), Expect = 1e-24
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = +1
Query: 34 KLSSNFYASPRKSKP*-HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQL 210
+++S Y P + P +LG+PL + I PL+E+++ R++SW +K LS++GR QL
Sbjct: 607 RITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQL 666
Query: 211 IKRVLFEMQTYWAQVFLLPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNG 390
I V+F + +W FLLPK IK S+C FLW GSI+ K + VSW C+PK G
Sbjct: 667 ISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGG 726
Query: 391 LNILDYHIWNKVVICKLLWAIASKKDTLWVK 483
L + WNK ++ +L+W + + +LW +
Sbjct: 727 LGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQ 757
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 119 bits (299), Expect = 2e-24
Identities = 55/156 (35%), Positives = 90/156 (57%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL S + PL++R+ +R SWT + LS++GR+QL+K V++ +WA +F+
Sbjct: 312 YLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFI 371
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP + + +C FLW+G+ ++ A +SWD +C K GL + WNKV+ KL
Sbjct: 372 LPNQCLHKLEQMCNAFLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKL 431
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEVPVPKQAC 549
+W + + +LWV ++ + K +L EV P C
Sbjct: 432 IWLLFTASGSLWVSWVRWVWRKLCKLREVARPFVIC 467
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 119 bits (299), Expect = 2e-24
Identities = 56/149 (37%), Positives = 88/149 (59%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL + ++ C+PL+E++ RI SWT++FLSY+GR+ LI VL+ + +W F
Sbjct: 771 YLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFR 830
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP+K I+ +C FLW+G+ S +A +SW +C PK GL + N V KL
Sbjct: 831 LPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKL 890
Query: 442 LWAIASKKDTLWVK*IQSYYIKGRELNEV 528
+W I S ++LWVK + + ++ EV
Sbjct: 891 VWKIVSHSNSLWVKWVDQHLLRNASFWEV 919
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 116 bits (290), Expect = 2e-23
Identities = 49/144 (34%), Positives = 87/144 (60%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LGVPL S + + PL++R+ +R SWT + LS++GR+QL+K V++ +WA VF+
Sbjct: 765 YLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFI 824
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
P + ++ +C FLW+G+ ++ A +SW+ +C PK GL + WN+++ KL
Sbjct: 825 FPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKL 884
Query: 442 LWAIASKKDTLWVK*IQSYYIKGR 513
+W + + +LWV ++ + I R
Sbjct: 885 IWLLFTSAGSLWVSWVRLHLIGRR 908
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 115 bits (289), Expect = 3e-23
Identities = 54/134 (40%), Positives = 80/134 (59%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL + +T + PL E++ RI +WT+++LS++GR+ LI VL+ +W F
Sbjct: 176 YLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFR 235
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP +K NSIC FLW+G ++A VSWD +C PK GL + N V + KL
Sbjct: 236 LPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKL 295
Query: 442 LWAIASKKDTLWVK 483
+W + S D+LWVK
Sbjct: 296 IWRVTSNDDSLWVK 309
>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
Length = 355
Score = 115 bits (289), Expect = 3e-23
Identities = 54/142 (38%), Positives = 84/142 (59%)
Frame = +1
Query: 82 HLGVPLSSSIVTIK*CMPLIERMTTRIKSWTTKFLSYSGRVQLIKRVLFEMQTYWAQVFL 261
+LG+PL + +T +PLIE++ RI SWT +FLSY GR+QLIK VL + +W+ F
Sbjct: 16 YLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNFWSSAFR 75
Query: 262 LPKKIIKLFNSICRIFLWTGSIEKSKRALVSWDKLCMPKLVNGLNILDYHIWNKVVICKL 441
LP +K +C FLW+G K+ A ++W K+C+P GL + N V KL
Sbjct: 76 LPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGLGLRPLKEINTVCGLKL 135
Query: 442 LWAIASKKDTLWVK*IQSYYIK 507
+W + + + +LW + +Q+Y I+
Sbjct: 136 IWRLLASQTSLWGQWVQTYLIR 157