BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041310
         (801 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               80   3e-23
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    57   8e-18
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...    55   8e-18
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    55   6e-17
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...    55   3e-16
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    57   4e-16
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    55   6e-16
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    55   1e-15
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    57   1e-15
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...    58   3e-15
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    58   4e-15
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...    56   6e-15
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    54   2e-14
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    57   2e-14
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...    58   2e-14
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...    55   4e-14
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    60   2e-13
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    53   3e-13
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...    47   9e-12
ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A...    72   2e-10

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 79.7 bits (195), Expect(2) = 3e-23
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A ++W+ FG  +G+  +      +   WWN++T N++H +I   +PI I WEIWK+  AC
Sbjct: 629 ASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCAC 688

Query: 620 KFRDQKKVYFNKMEYQVVRNV 558
           K+ DQKK+++  ME  V  N+
Sbjct: 689 KYGDQKKMWYRTMENHVWWNL 709



 Score = 55.8 bits (133), Expect(2) = 3e-23
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 5/169 (2%)
 Frame = -1

Query: 537  YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
            +P+ +I  +  D+ + +E L+P    + + W   ++   K+N DGSF+  S  AG+G I+
Sbjct: 717  FPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFS--SGNAGLGWIV 774

Query: 357  RDCKGNFIHDFSNSVHCSSSNQTEATALDLQSNGALQK-----VLSMSQWRWIP*XXXXX 193
            RD     I  FS    CSS+N  EA A        LQ+      L +     +       
Sbjct: 775  RDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVV----DMV 830

Query: 192  XXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAKLATNS 46
                                +      + HC+REAN VAD+LAK A  S
Sbjct: 831  RNGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVIS 879


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 57.0 bits (136), Expect(3) = 8e-18
 Identities = 25/82 (30%), Positives = 48/82 (58%)
 Frame = -2

Query: 800  AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
            AK+IW+ + +A+GV+     ++ +   W N + +N VHK++  I+P FI W +WK   A 
Sbjct: 1160 AKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLWKNRCAV 1219

Query: 620  KFRDQKKVYFNKMEYQVVRNVL 555
            K+   K     +++Y + +N++
Sbjct: 1220 KY-GLKNSSIYRVQYGIFKNIM 1240



 Score = 53.9 bits (128), Expect(3) = 8e-18
 Identities = 27/88 (30%), Positives = 49/88 (55%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            V+P++    +  ++ + +E+ +    +  + W K D+G++KLN DGS  + S + G GGI
Sbjct: 1246 VFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGI 1305

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
            +RD +G  I+ FS      ++N  E  A
Sbjct: 1306 LRDNQGKIIYAFSLPFGFGTNNFAEIKA 1333



 Score = 26.2 bits (56), Expect(3) = 8e-18
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 265  VQWCLTEGFVNVTMEMDTLIIINMLNKKPFDNLNL 161
            + WC   G+  + +E+D+ ++ N +N     N+N+
Sbjct: 1338 LDWCEQHGYKKIELEVDSKLLCNWIN----SNINI 1368


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 655

 Score = 55.1 bits (131), Expect(3) = 8e-18
 Identities = 25/82 (30%), Positives = 47/82 (57%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           AK+IW+   A +G+I     ++    +W N K +N VHK++  I+P  I W +WK   A 
Sbjct: 421 AKYIWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAV 480

Query: 620 KFRDQKKVYFNKMEYQVVRNVL 555
           K+  +K+   ++++Y + + V+
Sbjct: 481 KY-GKKRSNVHRVKYGIFKEVM 501



 Score = 55.1 bits (131), Expect(3) = 8e-18
 Identities = 28/88 (31%), Positives = 47/88 (53%)
 Frame = -1

Query: 540 VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
           V+P++   AN  ++ + IE    +  +  ++W K   G +KLN DGS  + S + G GGI
Sbjct: 507 VFPSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGI 566

Query: 360 IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
           +RD +G  ++ FS      ++N  E  A
Sbjct: 567 LRDFQGKIVYAFSIPFGVGTNNFAEIKA 594



 Score = 26.9 bits (58), Expect(3) = 8e-18
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 271 FAVQWCLTEGFVNVTMEMDTLIIINML 191
           + +QWC   G+  V +E+D+ ++ N +
Sbjct: 597 YGMQWCEQHGYKKVELEVDSELLFNWI 623


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 55.5 bits (132), Expect(3) = 6e-17
 Identities = 25/82 (30%), Positives = 46/82 (56%)
 Frame = -2

Query: 800  AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
            AKHIW+   A +GV+     ++    +W N + +N VHK++  I+P  I W +WK   A 
Sbjct: 967  AKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAV 1026

Query: 620  KFRDQKKVYFNKMEYQVVRNVL 555
            K+   K    ++++Y + ++V+
Sbjct: 1027 KY-GNKSSSIHRVQYGIFKDVM 1047



 Score = 51.2 bits (121), Expect(3) = 6e-17
 Identities = 25/88 (28%), Positives = 48/88 (54%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            V+P++   ++   + + +E  + +  +  ++W K  +G +KLN DGS  + S + G GGI
Sbjct: 1053 VFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGI 1112

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
            +RD +G  ++ FS      ++N  E  A
Sbjct: 1113 LRDHQGKIVYAFSLPFGFGTNNIAEIKA 1140



 Score = 27.3 bits (59), Expect(3) = 6e-17
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -3

Query: 271  FAVQWCLTEGFVNVTMEMDTLIIINMLNKK 182
            + ++WC   G+  V +E+D+ ++ N +  K
Sbjct: 1143 YGLEWCDQHGYKRVELEVDSQLLCNWIKNK 1172


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 955

 Score = 55.5 bits (132), Expect(3) = 3e-16
 Identities = 23/82 (28%), Positives = 45/82 (54%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A +IW+Y+    G+      ++ +   W N+ +SN V+K++  I+P FI W +WK   A 
Sbjct: 661 ANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCAV 720

Query: 620 KFRDQKKVYFNKMEYQVVRNVL 555
           K+   K     +++Y + ++V+
Sbjct: 721 KY-GNKISSIQRVQYGIFKDVM 741



 Score = 51.2 bits (121), Expect(3) = 3e-16
 Identities = 28/88 (31%), Positives = 47/88 (53%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            V+PN+    +   + + +E+ Q ++ V  ++W+K   G +KLN DGS   +S + G GGI
Sbjct: 747  VFPNIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGI 806

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
            +RD  G   + FS      ++N  E  A
Sbjct: 807  LRDYTGKLHYAFSIPFGLGTNNIAEMEA 834



 Score = 25.0 bits (53), Expect(3) = 3e-16
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -3

Query: 274 RFAVQWCLTEGFVNVTMEMDTLII 203
           R+ + WC   G+ ++ +E+D+ I+
Sbjct: 836 RYGLDWCEQHGYKSILLEVDSEIL 859


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score = 56.6 bits (135), Expect(3) = 4e-16
 Identities = 24/80 (30%), Positives = 40/80 (50%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +WR F    G+      +Q     WW  +  N  H+++ Q +PIFI W +WK   AC
Sbjct: 106 ATKVWRAFTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCAC 165

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y V ++
Sbjct: 166 KY-GGKSTNISRVKYAVYKD 184



 Score = 46.2 bits (108), Expect(3) = 4e-16
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = -1

Query: 537 YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
           +P V    N   +    ER + ++ V   TW +      K+N DGS    +   G GGII
Sbjct: 193 FPRVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGII 252

Query: 357 RDCKGNFIHDFSNSVHCSSSNQTEATA 277
           RD +G  +  F+  +   ++N+ EA A
Sbjct: 253 RDKEGKMVLAFATPLGDGTNNKAEAEA 279



 Score = 28.5 bits (62), Expect(3) = 4e-16
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -3

Query: 271 FAVQWCLTEGFVNVTMEMDTLIIINMLNKK 182
           F + W L  G  N+ +E+D+ ++++ ++KK
Sbjct: 282 FGLSWALELGHRNILIELDSQLVVHWISKK 311


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 1010

 Score = 54.7 bits (130), Expect(3) = 6e-16
 Identities = 25/84 (29%), Positives = 44/84 (52%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           AK+IW+     +GV      ++ +  +W NI   N V K++ QI+P FI W +WK   A 
Sbjct: 716 AKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAV 775

Query: 620 KFRDQKKVYFNKMEYQVVRNVLAA 549
           K    K+    +++Y + ++ + A
Sbjct: 776 K-HGSKQCSTQRVQYAIFKDTMQA 798



 Score = 53.9 bits (128), Expect(3) = 6e-16
 Identities = 29/87 (33%), Positives = 45/87 (51%)
 Frame = -1

Query: 537  YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
            +PN+    N   + +  E  Q +V V ++ W+K  +G FKLN DGS     ++ G GGI+
Sbjct: 803  FPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGIL 862

Query: 357  RDCKGNFIHDFSNSVHCSSSNQTEATA 277
            RD  G  I+ F+      ++N  E  A
Sbjct: 863  RDHNGKLIYAFAIPFGIGTNNFAEMKA 889



 Score = 21.9 bits (45), Expect(3) = 6e-16
 Identities = 5/23 (21%), Positives = 14/23 (60%)
 Frame = -3

Query: 271 FAVQWCLTEGFVNVTMEMDTLII 203
           + + WC   G+  + +E+D+ ++
Sbjct: 892 YGLSWCEQHGYKRIILEVDSELL 914


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 55.5 bits (132), Expect(2) = 1e-15
 Identities = 21/80 (26%), Positives = 42/80 (52%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +W +F A+ G+  +   +Q     WW+   +N  H+++ Q  P F+ W +WK   AC
Sbjct: 22  AGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRCAC 81

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y + ++
Sbjct: 82  KY-GGKATNISRVKYAIYKD 100



 Score = 54.3 bits (129), Expect(2) = 1e-15
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 8/170 (4%)
 Frame = -1

Query: 546 EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
           +  +P++K  +N   +    E+ +  + V ++ W +      K+N DGS      + G G
Sbjct: 106 QNTFPHIKWPSNWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAG 165

Query: 366 GIIRDCKGNFIHDFSNSVHCSSSNQTE--------ATALDLQSNGALQKVLSMSQWRWIP 211
           GI+RD +G  +  F+ S+   S+NQ E        + A+DL     + +V S    +WI 
Sbjct: 166 GILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWI- 224

Query: 210 *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                         +    H FREAN  ADSL+K
Sbjct: 225 -----TKKTTHHWSVSNQLEKIQQLIQRAHKFKCEHIFREANWTADSLSK 269


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 57.4 bits (137), Expect(2) = 1e-15
 Identities = 23/80 (28%), Positives = 40/80 (50%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +W +F A+ G+      +Q     WW  +  N  H+++ Q  P FI W +WK   AC
Sbjct: 14  AARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTFICWNLWKNRCAC 73

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y V ++
Sbjct: 74  KY-GAKATNISRVKYAVYKD 92



 Score = 52.4 bits (124), Expect(2) = 1e-15
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
 Frame = -1

Query: 537 YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
           +P++K  A+   +    E+ + ++ V  + W +      K+N DGS      Q G GGI+
Sbjct: 101 FPHIKWPASWTALIQTSEKCKHEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGIL 160

Query: 357 RDCKGNFIHDFSNSVHCSSSNQTEAT--------ALDLQSNGALQKVLSMSQWRWIP*XX 202
           RD +G  +  F+  +   S+N+ E          AL+L     L ++ S    +WI    
Sbjct: 161 RDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALELGYRNILIELDSQLVVQWI---- 216

Query: 201 XXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAKLATNS 46
                                  +        H FREAN VADSL+K + N+
Sbjct: 217 --SKKTAPHWSVTKQIERIQHLIMQTQNFKCTHIFREANWVADSLSKHSHNT 266


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 775

 Score = 58.2 bits (139), Expect(2) = 3e-15
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +W+ F A  G+      +Q     WW  K+ N  H+++ Q  PIFI W +WK   AC
Sbjct: 481 AGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCAC 540

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y V ++
Sbjct: 541 KY-GGKATNISRVKYAVYKD 559



 Score = 50.4 bits (119), Expect(2) = 3e-15
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 8/170 (4%)
 Frame = -1

Query: 546  EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
            +  +P+++  A+   + H  E+ +    V Q+ W +      K+N DGS        G G
Sbjct: 565  KNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAG 624

Query: 366  GIIRDCKGNFIHDFSNSVHCSSSNQTEAT--------ALDLQSNGALQKVLSMSQWRWIP 211
            GIIR+ +G  +  F+ S+   S+N+ E          AL+L     + ++ S    +WI 
Sbjct: 625  GIIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWI- 683

Query: 210  *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                      +        H FREAN VAD+L+K
Sbjct: 684  -----SKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFREANWVADALSK 728


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 58.2 bits (139), Expect(2) = 4e-15
 Identities = 23/77 (29%), Positives = 40/77 (51%)
 Frame = -2

Query: 791 IWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTACKFR 612
           +W+ F A+ G+ H    +Q     WW     N  H+++ Q  PIFI W +WK   A K+ 
Sbjct: 17  VWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFICWNLWKNRCASKY- 75

Query: 611 DQKKVYFNKMEYQVVRN 561
             K  Y ++++Y + ++
Sbjct: 76  GGKATYISRVKYAIYKD 92



 Score = 50.1 bits (118), Expect(2) = 4e-15
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 8/170 (4%)
 Frame = -1

Query: 546 EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
           +  +P++   A+   +    ER + ++ V ++TW +      K+N DGS      + G G
Sbjct: 98  KNAFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIGAG 157

Query: 366 GIIRDCKGNFIHDFSNSVHCSSSNQTE--------ATALDLQSNGALQKVLSMSQWRWIP 211
           GIIRD  G  I  F+ S+   S+N+ E          AL+L     + ++ S     WI 
Sbjct: 158 GIIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDSQLVVHWI- 216

Query: 210 *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                     L        H  REAN VADSL+K
Sbjct: 217 -----NKKSAHHWSVANEIAKIQFLILQTQNFKCQHTLREANWVADSLSK 261


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score = 56.2 bits (134), Expect(3) = 6e-15
 Identities = 26/82 (31%), Positives = 44/82 (53%)
 Frame = -2

Query: 800  AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
            A +IW+Y  A +GV      I+    +W N  T N VHK+I QI+P +I W +WK     
Sbjct: 1336 ANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQILPNYICWNLWKNRCGV 1395

Query: 620  KFRDQKKVYFNKMEYQVVRNVL 555
            K+   K     +++Y + ++++
Sbjct: 1396 KY-GHKTSSIKRVQYGIFKDIM 1416



 Score = 47.8 bits (112), Expect(3) = 6e-15
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            VYP +   ++   +    E    +  +  ++W+K   G +KLN DGS  + + + G GGI
Sbjct: 1422 VYPIIPWQSSLYHLIKTAEHCHQQYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGI 1481

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
            +RD  G  I+ FS  +   ++N  E  A
Sbjct: 1482 LRDHTGKIIYAFSVPLDFGTNNMAELKA 1509



 Score = 23.1 bits (48), Expect(3) = 6e-15
 Identities = 5/20 (25%), Positives = 13/20 (65%)
 Frame = -3

Query: 271  FAVQWCLTEGFVNVTMEMDT 212
            + ++WC   G+  + +E+D+
Sbjct: 1512 YGLEWCQQHGYKRIALEVDS 1531


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 54.3 bits (129), Expect(2) = 2e-14
 Identities = 24/82 (29%), Positives = 47/82 (57%)
 Frame = -2

Query: 800  AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
            AK+IW+   A +G+I     ++    +W N + +N VHK++  I+P  I W +WK   A 
Sbjct: 1039 AKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAV 1098

Query: 620  KFRDQKKVYFNKMEYQVVRNVL 555
            K+  +K+   ++++Y + + V+
Sbjct: 1099 KY-GKKRSSIHRVKYGIFKEVM 1119



 Score = 51.6 bits (122), Expect(2) = 2e-14
 Identities = 26/88 (29%), Positives = 47/88 (53%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            V+P++   +N  ++ + IE    +  +  ++W K  +G +KLN DGS  + S + G GG 
Sbjct: 1125 VFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGN 1184

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
            +RD +G  ++ FS      ++N  E  A
Sbjct: 1185 LRDFQGKIVYAFSIPFGVGTNNFAEIKA 1212


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 56.6 bits (135), Expect(2) = 2e-14
 Identities = 23/80 (28%), Positives = 40/80 (50%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +WR F    G+      +Q     WW  +  N  H+++ Q +PIFI W +WK   AC
Sbjct: 377 ATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLWKNRCAC 436

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y + ++
Sbjct: 437 KY-GGKSTNISRVKYAIYKD 455



 Score = 49.3 bits (116), Expect(2) = 2e-14
 Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 8/170 (4%)
 Frame = -1

Query: 546 EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
           +  +P +    N   +    ER + ++ V   TW +      K+N DGS    +   G G
Sbjct: 461 KSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAG 520

Query: 366 GIIRDCKGNFIHDFSNSVHCSSSNQTEAT--------ALDLQSNGALQKVLSMSQWRWIP 211
           GIIRD +G  +  F+  +   ++N+ EA         AL+L     L ++ S    +WI 
Sbjct: 521 GIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWIS 580

Query: 210 *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                       N      H FREAN VAD+L+K
Sbjct: 581 KKEPPHWNVINQIERIQQLIMQTQNFKCN------HIFREANWVADALSK 624


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 775

 Score = 57.8 bits (138), Expect(2) = 2e-14
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +W+ F A  G+      +Q     WW  K+ N  H+++ Q  PIFI W +WK   AC
Sbjct: 481 AGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCAC 540

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K    ++++Y V ++
Sbjct: 541 KY-GGKATNISRVKYVVYKD 559



 Score = 47.8 bits (112), Expect(2) = 2e-14
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
 Frame = -1

Query: 546  EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
            +  +P+++  A+   + H  E+ +    V Q+ W +      K+N DGS      + G G
Sbjct: 565  KNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAG 624

Query: 366  GIIRDCKGNFIHDFSNSVHCSSSN--QTEAT------ALDLQSNGALQKVLSMSQWRWIP 211
            GIIR+ +G  +  F+ S+   + N  +TEA       AL+L     + ++ S    +WI 
Sbjct: 625  GIIRNKEGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQWI- 683

Query: 210  *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                      +        H F+EAN VAD+L+K
Sbjct: 684  -----SKKSVHHWSVSNQIERLQYLIMQTQNFKCQHIFKEANWVADALSK 728


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score = 55.1 bits (131), Expect(2) = 4e-14
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A  +W+ F A  G+     P+Q     WW  +  N  H+++ Q  P+FI W +WK   AC
Sbjct: 44  AAGVWKAFTAGAGLQADRTPLQAKLRQWWTARPRNEGHQLLLQATPVFIVWNLWKNICAC 103

Query: 620 KF 615
           K+
Sbjct: 104 KY 105



 Score = 49.7 bits (117), Expect(2) = 4e-14
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 8/174 (4%)
 Frame = -1

Query: 546 EQVYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIG 367
           +  +P++    +   +    E  + ++ V  +TW +      K+N DGS      Q G G
Sbjct: 128 KMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSALTNPGQTGAG 187

Query: 366 GIIRDCKGNFIHDFSNSVHCSSSNQTEATALDLQSNGALQ--------KVLSMSQWRWIP 211
           GI+RD +G  +  F+  +   ++N  EA A+    + AL+        ++ +    +WI 
Sbjct: 188 GILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELDAQLVVKWI- 246

Query: 210 *XXXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAKLATN 49
                                     +        H FREAN VAD+L+K + N
Sbjct: 247 -----TRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHSHN 295


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 59.7 bits (143), Expect(2) = 2e-13
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -2

Query: 800  AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
            AK++W+YF  ++G+     P++ +   WW+   +N  HK+I    PIFI W +WK   A 
Sbjct: 953  AKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAV 1012

Query: 620  KF 615
            K+
Sbjct: 1013 KY 1014



 Score = 43.1 bits (100), Expect(2) = 2e-13
 Identities = 40/168 (23%), Positives = 57/168 (33%), Gaps = 8/168 (4%)
 Frame = -1

Query: 540  VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
            V+P +         C+ IE       V  + W K      KLN DGS        G G +
Sbjct: 1039 VFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDV 1098

Query: 360  IRDCKGNFIHDFSNSVHCSSSNQTEATA--------LDLQSNGALQKVLSMSQWRWIP*X 205
            IR+  G  I  +S  +   ++NQ E  A        + ++ N  + +V S     W    
Sbjct: 1099 IRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFKNN 1158

Query: 204  XXXXXXXXXXXXXXXXXXXXXXXXLGNAQITMVHCFREANMVADSLAK 61
                                            +H FREAN VAD L+K
Sbjct: 1159 KLIPWNISSQMQQLHQLATQLD------HFKCIHTFREANFVADVLSK 1200



 Score = 58.9 bits (141), Expect(2) = 3e-08
 Identities = 24/80 (30%), Positives = 46/80 (57%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A ++W+ F AA G+I     + ++   WW+ K +N  +++I Q  PIFI W +WK   A 
Sbjct: 657 ATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNRCAS 716

Query: 620 KFRDQKKVYFNKMEYQVVRN 561
           K+   K+   ++++Y + ++
Sbjct: 717 KY-GGKQSNISRVKYAIYKD 735



 Score = 25.8 bits (55), Expect(2) = 3e-08
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = -1

Query: 537 YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
           +P +K  +N  ++    ER      V  + W K      K+N DGS      + G G  I
Sbjct: 744 FPQIKWPSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIGAGSNI 803

Query: 357 R 355
           +
Sbjct: 804 Q 804


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 52.8 bits (125), Expect(3) = 3e-13
 Identities = 27/88 (30%), Positives = 47/88 (53%)
 Frame = -1

Query: 540 VYPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGI 361
           VYPN+   ++   + + +E+ Q  + V  + W++   G  KLN DGS    + + G GGI
Sbjct: 181 VYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGI 240

Query: 360 IRDCKGNFIHDFSNSVHCSSSNQTEATA 277
           +RD +G  I+ F+  +   ++N  E  A
Sbjct: 241 LRDHQGKLIYAFAIPLGFGTNNFAEIQA 268



 Score = 43.9 bits (102), Expect(3) = 3e-13
 Identities = 19/82 (23%), Positives = 43/82 (52%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           AK+IW+     +G+      ++    +W  + + N VHK+I  I+P  I W +WK   + 
Sbjct: 95  AKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKNRCSA 154

Query: 620 KFRDQKKVYFNKMEYQVVRNVL 555
           K+ ++    + ++E  + ++++
Sbjct: 155 KYGNKPSSIY-RVESGIFKDIM 175



 Score = 24.6 bits (52), Expect(3) = 3e-13
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -3

Query: 265 VQWCLTEGFVNVTMEMDTLIIINMLNKKPFDNLNLKSNPGHHLKSWKCTNH 113
           +QWC   GF  + +E+D+ ++   +       +N  S P      W+C ++
Sbjct: 273 LQWCQQHGFEKIILEVDSELLHKWI-------INKSSVP------WRCLHY 310


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 601

 Score = 46.6 bits (109), Expect(3) = 9e-12
 Identities = 23/81 (28%), Positives = 44/81 (54%)
 Frame = -1

Query: 537 YPNVKISAN*PDMCHHIERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGII 358
           Y N+    +   + + I++ Q +  +  + W K  +GR+KLN DGS  +++     GGI+
Sbjct: 394 YSNIPWQYSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGIL 453

Query: 357 RDCKGNFIHDFSNSVHCSSSN 295
           RD +G+ I  F++     ++N
Sbjct: 454 RDHQGSIIFAFASPFAFGTNN 474



 Score = 46.2 bits (108), Expect(3) = 9e-12
 Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = -2

Query: 800 AKHIWRYFGAAMGVIHQPGPIQRIYSNWWNIKTSNNVHKIIKQIVPIFISWEIWKQWTAC 621
           A +IW+   + +G +H    ++     W +++T+N VHK++   +P  I W +W+   A 
Sbjct: 307 ANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWENRCAV 366

Query: 620 KF-RDQKKVYFNKMEYQVVRNVL 555
           K+   Q  +Y  +++Y + ++ +
Sbjct: 367 KYGGKQSSIY--RVQYGIFKDTM 387



 Score = 23.5 bits (49), Expect(3) = 9e-12
 Identities = 5/23 (21%), Positives = 16/23 (69%)
 Frame = -3

Query: 271 FAVQWCLTEGFVNVTMEMDTLII 203
           + ++WC   G+ ++ +E+D+ ++
Sbjct: 483 YGLEWCEQHGYKDIVLEIDSELL 505


>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 207

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 49/147 (33%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
 Frame = -1

Query: 486 ERLQPKVTVEQITWKKADVGRFKLNVDGSFNRKSDQAGIGGIIRDCKGNFIHDFSNSVHC 307
           ER++P   + Q+ W    +G  K+N DGSF  +   AGIGGI R+  G  +  FS  V C
Sbjct: 18  ERIKPIQKLTQVKWSTPQIGTIKVNTDGSFLWEIGSAGIGGIARNSNGEMVMAFSIPVAC 77

Query: 306 SSSNQTEATALDLQSNGALQKVL---SMSQWRWIP*XXXXXXXXXXXXXXXXXXXXXXXX 136
           +S+N  EA A +       Q+ L   ++     I                          
Sbjct: 78  TSNNMAEALAAEFGGKWCSQQGLTNFTLELDSMIIVNMVNNKSNNNLKLRQIIDNIVEIV 137

Query: 135 XLGNAQITMVHCFREANMVADSLAKLA 55
              NAQ+T  HCFRE+N VAD LAK A
Sbjct: 138 DQSNAQVT--HCFRESNQVADFLAKRA 162