BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041263
         (514 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containi...   162   4e-38
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr...    74   3e-11
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,...    69   6e-10
ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]    66   5e-09
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
emb|CBI28421.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlise...    60   3e-07
gb|EOX93461.1| Pentatricopeptide repeat-containing protein, puta...    57   3e-06

>ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like isoform X1 [Solanum tuberosum]
           gi|565394734|ref|XP_006363011.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like isoform X2 [Solanum tuberosum]
           gi|565394736|ref|XP_006363012.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like isoform X3 [Solanum tuberosum]
          Length = 913

 Score =  166 bits (421), Expect = 2e-39
 Identities = 86/110 (78%), Positives = 91/110 (82%), Gaps = 8/110 (7%)
 Frame = +2

Query: 209 MVKPLKPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPDFF--------EENNRLSFIVSKV 364
           MVKPLKPIFLYSLNPHR SKFR FT+LGRLQFSSKPD F        EE+ RL FIVSKV
Sbjct: 1   MVKPLKPIFLYSLNPHRRSKFRGFTYLGRLQFSSKPDLFDQSESIQTEESKRLLFIVSKV 60

Query: 365 SDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           SDILSNPRL WQT+ EL SLSS +RP HVAKLVEIH NTEVAL+FFYWVS
Sbjct: 61  SDILSNPRLQWQTNGELQSLSSIVRPPHVAKLVEIHENTEVALQFFYWVS 110


>ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Solanum lycopersicum]
          Length = 815

 Score =  162 bits (410), Expect = 4e-38
 Identities = 83/110 (75%), Positives = 90/110 (81%), Gaps = 8/110 (7%)
 Frame = +2

Query: 209 MVKPLKPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPDFF--------EENNRLSFIVSKV 364
           MVKPLKPI LYSLNPHR S+FR +T+LGRLQFSSKPD F        EE+ RL FIVSKV
Sbjct: 1   MVKPLKPILLYSLNPHRRSRFRGYTYLGRLQFSSKPDLFDQSESIQTEESKRLLFIVSKV 60

Query: 365 SDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           SDILSNPRL WQT+ EL SLSS LRP HVAK+VEIH NTEVAL+FFYWVS
Sbjct: 61  SDILSNPRLQWQTNGELQSLSSILRPPHVAKIVEIHENTEVALQFFYWVS 110


>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
           gi|568830449|ref|XP_006469511.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Citrus sinensis]
           gi|557550366|gb|ESR60995.1| hypothetical protein
           CICLE_v10014182mg [Citrus clementina]
          Length = 929

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = +2

Query: 296 LQFSSKPDFFEENNRLSFIVSKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHV 475
           L FSS P+ +   ++   +V++V +ILSN  L W+ + ELN LS+KLRP HV+ ++  H 
Sbjct: 28  LTFSSGPNHYLPRSQFPNLVTRVCEILSN--LQWKKNPELNHLSAKLRPHHVSNIINTHQ 85

Query: 476 NTEVALKFFYWVS 514
           NT+V L+FFYW+S
Sbjct: 86  NTDVVLQFFYWIS 98


>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 821

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
 Frame = +2

Query: 209 MVKPL--KPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPDFFEENNRLSF--IVSKVSDIL 376
           M+KPL   P+FL           ++   L  L FSS P  +       F  +V KV D++
Sbjct: 1   MLKPLLKSPLFL----------LKKKNPLHFLVFSSVPTSYPFPKTTPFPNLVFKVLDLI 50

Query: 377 SNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           S    HW  + ELN L+S LRP HV+K++  H+NT+ AL+FFYW+S
Sbjct: 51  STDP-HWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWIS 95


>ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449530677|ref|XP_004172320.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
 Frame = +2

Query: 209 MVKPLKPI-------FLYSLNPHRNSKFRRFTHLGR-LQFSSKPDFFEENNRLSFIVSKV 364
           M+KP K +         + L  H++S F    H    L  SS  D F E      +VSK+
Sbjct: 1   MLKPHKTLPRMCFHSLYFLLGSHQSSNFSSQPHPSSPLSISSNTDPFPE------LVSKI 54

Query: 365 SDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           S ILS+P   W+ S+EL+ L  KL+P HV  L++ H NTE  L+FF+WVS
Sbjct: 55  SIILSSPT--WERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVS 102


>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
 Frame = +2

Query: 206 EMVKPLKPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPD----FFEENNRLSF--IVSKVS 367
           EMV  LK   L  L  H +        LG L FSSKP     F    +R  F  IVS+V 
Sbjct: 42  EMVNHLKSPCLVHLQNHSSV-------LGFLNFSSKPHISSHFAVPASREPFQAIVSRVC 94

Query: 368 DILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
            ILS  R+ W+ S+EL  LS +L+  HVA++V +H +TE  ++FFYW+S
Sbjct: 95  AILS--RVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWIS 141


>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
 Frame = +2

Query: 209 MVKPLKPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPD----FFEENNRLSF--IVSKVSD 370
           MV  LK   L  L  H +        LG L FSSKP     F    +R  F  IVS+V  
Sbjct: 1   MVNHLKSPCLVHLQNHSSV-------LGFLNFSSKPHISSHFAVPASREPFQAIVSRVCA 53

Query: 371 ILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           ILS  R+ W+ S+EL  LS +L+  HVA++V +H +TE  ++FFYW+S
Sbjct: 54  ILS--RVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWIS 99


>emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
 Frame = +2

Query: 209 MVKPLKPIFLYSLNPHRNSKFRRFTHLGRLQFSSKPD----FFEENNRLSF--IVSKVSD 370
           MV  LK   L  L  H +        LG L FSSKP     F    +R  F  IVS+V  
Sbjct: 1   MVNHLKSPCLVHLQNHSSV-------LGFLNFSSKPHISSHFAVPASREPFQAIVSRVCA 53

Query: 371 ILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           ILS  R+ W+ S+EL  LS +L+  HVA++V +H +TE  ++FFYW+S
Sbjct: 54  ILS--RVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWIS 99


>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = +2

Query: 350 IVSKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           +VSK+S ILS+P+  W+ S+EL  LS KL+P HV  +++ H NT+  L+FF+W+S
Sbjct: 50  LVSKISTILSSPK--WEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWIS 102


>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/55 (49%), Positives = 41/55 (74%)
 Frame = +2

Query: 350 IVSKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           +VSK+S ILS+P+  W+ S+EL  LS KL+P HV  +++ H NT+  L+FF+W+S
Sbjct: 50  LVSKISTILSSPK--WEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWIS 102


>ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Fragaria vesca subsp. vesca]
          Length = 927

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
 Frame = +2

Query: 209 MVKPLK-PIFLYS------LNPHRNSKF----RRFTHLGRLQFSSKPDFFEENNRLSFIV 355
           M+ P+K P  L+       L PH   KF    + FTHL     +  P+          +V
Sbjct: 1   MLNPIKTPTLLHLRTLQSLLGPHHFPKFPSRTKLFTHLCHSSPNPSPN----------LV 50

Query: 356 SKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           S+V DIL +P+  W+  +EL+ L   LR  H+ K+++ H NT+ AL+FF+WVS
Sbjct: 51  SRVCDILGDPK--WEKISELSGLIINLRTYHMVKIIQTHRNTDSALRFFFWVS 101


>gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlisea aurea]
          Length = 860

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = +2

Query: 341 LSFIVSKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHVNTEVALKFFYWVS 514
           LS +  +V  +LSNP   W  S+EL +L  KL P H+ +++E H N + AL+FFYW+S
Sbjct: 2   LSTLKDRVCHLLSNPHTPWSRSSELKALIPKLNPSHIPEILETHENLDSALQFFYWLS 59


>gb|EOX93461.1| Pentatricopeptide repeat-containing protein, putative isoform 1
           [Theobroma cacao]
          Length = 909

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = +2

Query: 296 LQFSSKPDFFEENNRLSFIVSKVSDILSNPRLHWQTSAELNSLSSKLRPRHVAKLVEIHV 475
           L FSS+P         S +VSK+ +ILS+ +  W+ + EL  L+S L+P HV++++  H 
Sbjct: 24  LAFSSQP------TNQSSLVSKICNILSHRQ--WKQNLELLHLTSDLKPHHVSQIITTHK 75

Query: 476 NTEVALKFFYWVS 514
           NT+  L+FF+WVS
Sbjct: 76  NTDSVLEFFFWVS 88