BLASTX nr result

ID: Atropa21_contig00041119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041119
         (729 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008999566.1| apocytochrome B (mitochondrion) [Helianthus ...    57   8e-06
gb|AGR66221.1| apocytochrome b, partial (mitochondrion) [Trichop...    57   8e-06
emb|CAA84545.1| apocytochrome b [Helianthus petiolaris]                57   8e-06
emb|CAA67007.1| Apocytochrome b [Helianthus annuus]                    57   8e-06
ref|YP_173366.1| apocytochrome b [Nicotiana tabacum] gi|1519572|...    57   8e-06
gb|AFJ38486.1| apocytochrome b, partial (mitochondrion) [Cymodoc...    57   8e-06
gb|ADQ28328.1| apocytochrome b [Syringodium isoetifolium]              57   8e-06
gb|ADQ28327.1| apocytochrome b [Amphibolis griffithii]                 57   8e-06
gb|ACV71603.1| apocytochrome b [Homalanthus populneus]                 57   8e-06
gb|ABU50867.1| apocytochrome b [Nepenthes sp. 'Kosobe']                57   8e-06
gb|ABI75001.1| apocytochrome b [Syringodium filiforme]                 57   8e-06
gb|ABI74977.1| apocytochrome b [Cymodocea nodosa]                      57   8e-06
gb|ABI74978.1| apocytochrome b [Cymodocea serrulata]                   57   8e-06
gb|ABK91486.1| apocytochrome b [Trichopus zeylanicus]                  57   8e-06
gb|ABK91424.1| apocytochrome b [Tacca parkeri]                         57   8e-06
emb|CAA41343.1| apocytochrome b [Solanum tuberosum]                    57   8e-06
gb|AAD03041.1| apocytochrome b [Solanum tuberosum]                     57   8e-06

>ref|YP_008999566.1| apocytochrome B (mitochondrion) [Helianthus annuus]
           gi|571031387|gb|AHF21032.1| apocytochrome B
           (mitochondrion) [Helianthus annuus]
          Length = 397

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


>gb|AGR66221.1| apocytochrome b, partial (mitochondrion) [Trichopus zeylanicus
           subsp. travancoricus]
          Length = 320

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 166 ATLNRFFSLHHLLPFFLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 225

Query: 171 VVF 179
           V F
Sbjct: 226 VAF 228


>emb|CAA84545.1| apocytochrome b [Helianthus petiolaris]
          Length = 397

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


>emb|CAA67007.1| Apocytochrome b [Helianthus annuus]
          Length = 397

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


>ref|YP_173366.1| apocytochrome b [Nicotiana tabacum] gi|1519572|gb|AAB07549.1|
           apocytochrome b [Nicotiana tabacum]
          Length = 393

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


>gb|AFJ38486.1| apocytochrome b, partial (mitochondrion) [Cymodocea rotundata]
          Length = 275

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 101 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 160

Query: 171 VVF 179
           V F
Sbjct: 161 VAF 163


>gb|ADQ28328.1| apocytochrome b [Syringodium isoetifolium]
          Length = 343

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 158 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 217

Query: 171 VVF 179
           V F
Sbjct: 218 VAF 220


>gb|ADQ28327.1| apocytochrome b [Amphibolis griffithii]
          Length = 343

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 158 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 217

Query: 171 VVF 179
           V F
Sbjct: 218 VAF 220


>gb|ACV71603.1| apocytochrome b [Homalanthus populneus]
          Length = 253

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 173 ATLNRFFSLHHLLPFLLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 232

Query: 171 VVF 179
           V F
Sbjct: 233 VAF 235


>gb|ABU50867.1| apocytochrome b [Nepenthes sp. 'Kosobe']
          Length = 367

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 172 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 231

Query: 171 VVF 179
           V F
Sbjct: 232 VAF 234


>gb|ABI75001.1| apocytochrome b [Syringodium filiforme]
          Length = 348

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 161 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 220

Query: 171 VVF 179
           V F
Sbjct: 221 VAF 223


>gb|ABI74977.1| apocytochrome b [Cymodocea nodosa]
          Length = 353

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 165 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 224

Query: 171 VVF 179
           V F
Sbjct: 225 VAF 227


>gb|ABI74978.1| apocytochrome b [Cymodocea serrulata]
          Length = 345

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 161 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 220

Query: 171 VVF 179
           V F
Sbjct: 221 VAF 223


>gb|ABK91486.1| apocytochrome b [Trichopus zeylanicus]
          Length = 359

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 169 ATLNRFFSLHHLLPFFLVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 228

Query: 171 VVF 179
           V F
Sbjct: 229 VAF 231


>gb|ABK91424.1| apocytochrome b [Tacca parkeri]
          Length = 346

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 165 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 224

Query: 171 VVF 179
           V F
Sbjct: 225 VAF 227


>emb|CAA41343.1| apocytochrome b [Solanum tuberosum]
          Length = 393

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


>gb|AAD03041.1| apocytochrome b [Solanum tuberosum]
          Length = 382

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 35/63 (55%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
 Frame = +3

Query: 3   ASLNRSKS-SSFTPHNLTVARLLHLVTLHHM---DPIIHWVCMDKIASYPYFYVKDLVGW 170
           A+LNR  S     P  L  A LLHL  LH     +P+     MDKIASYPYFYVKDLVGW
Sbjct: 180 ATLNRFFSLHHLLPFILVGASLLHLAALHQYGSNNPLGVHSEMDKIASYPYFYVKDLVGW 239

Query: 171 VVF 179
           V F
Sbjct: 240 VAF 242


Top