BLASTX nr result

ID: Atropa21_contig00041024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00041024
         (478 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578...    93   4e-18
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    65   6e-12
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595...    53   3e-08

>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
          Length = 277

 Score = 93.2 bits (230), Expect(2) = 4e-18
 Identities = 40/58 (68%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
 Frame = -2

Query: 324 LKWCANRGLD-AIGESDSLLLVKCVKRDWKPPWKISNQIKEIQKMIEDHSFNINHCFR 154
           L+WCA++G++ AIGE+DSLLL K +KR+WK PWKISNQ++EIQKMIEDH F+I HCF+
Sbjct: 202 LQWCASKGMEMAIGETDSLLLSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFK 259



 Score = 23.5 bits (49), Expect(2) = 4e-18
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -3

Query: 155 EANRPADSLATLSHRI 108
           EAN+PAD+LA L+ ++
Sbjct: 260 EANKPADALARLTSQL 275


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 65.5 bits (158), Expect(2) = 6e-12
 Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = -2

Query: 330  NSLKWCANRGLDAI-GESDSLLLVKCVKRDWKPPWKISNQIKEIQKMIEDHSFNINHCFR 154
            + ++ C  RG++ I GE+DS+LL K +  +W  PW++   +K+IQKM+E+H F INHC R
Sbjct: 1049 HGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLR 1108



 Score = 30.4 bits (67), Expect(2) = 6e-12
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 155  EANRPADSLATLSHRIEGIKIFNLFSDLPS-HKGPSKYGQMELTYF 21
            EAN+PAD LA++S   +   +F  +++LPS  KG     +M L  F
Sbjct: 1109 EANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTF 1154


>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
          Length = 1079

 Score = 52.8 bits (125), Expect(3) = 3e-08
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = -2

Query: 378  LGKASGQYRK*KQLNRNSLKWCANRGLDAI-GESDSLLLVKCVKRDWKPPWKISNQIKEI 202
            LG+ +  + + K L    ++WC + G + I  ESDS LLV CV      PW+I  ++ E+
Sbjct: 944  LGQGTSNWAEAKAL-LYGVQWCISSGHEFILAESDSRLLVDCVNNSSVTPWRILEEVNEL 1002

Query: 201  QKMIEDHSFNINHCFR 154
            +  +E   F +NHC+R
Sbjct: 1003 KNHMETTGFILNHCYR 1018



 Score = 26.6 bits (57), Expect(3) = 3e-08
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 155  EANRPADSLATLSHRIEGIKIFNLFSDLPS 66
            EAN+ AD+LA+ S    G  ++  F +LP+
Sbjct: 1019 EANQAADALASTSFSSPGNILYEYFEELPA 1048



 Score = 23.1 bits (48), Expect(3) = 3e-08
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 61   RGLVNMGKWNLPTFRIKPEK 2
            +GL+ M +W + +FR + +K
Sbjct: 1051 KGLMTMDRWGVTSFRTRQKK 1070


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