BLASTX nr result
ID: Atropa21_contig00039723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039723
(585 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338779.1| PREDICTED: E3 ubiquitin-protein ligase RNF12... 79 9e-13
gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobro... 62 1e-07
ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 61 2e-07
ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 61 2e-07
gb|ACU13632.1| unknown [Glycine max] 61 2e-07
ref|XP_003613816.1| RING finger protein [Medicago truncatula] gi... 58 2e-06
gb|EXC19987.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 58 2e-06
gb|AFK38844.1| unknown [Lotus japonicus] 58 2e-06
gb|EMT02218.1| RING finger protein 126 [Aegilops tauschii] 57 3e-06
ref|XP_006306505.1| hypothetical protein CARUB_v10012493mg [Caps... 57 4e-06
gb|EMS59452.1| E3 ubiquitin-protein ligase RING1-like protein [T... 57 4e-06
ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja... 57 4e-06
dbj|BAJ91076.1| predicted protein [Hordeum vulgare subsp. vulgare] 57 4e-06
gb|ABK21010.1| unknown [Picea sitchensis] gi|148908581|gb|ABR174... 57 4e-06
gb|EMJ25125.1| hypothetical protein PRUPE_ppa011037mg [Prunus pe... 57 5e-06
gb|ACU20614.1| unknown [Glycine max] 56 6e-06
gb|AFK42291.1| unknown [Medicago truncatula] 56 8e-06
gb|AFG56549.1| hypothetical protein 2_4925_01, partial [Pinus ta... 56 8e-06
ref|XP_003613818.1| RING finger protein [Medicago truncatula] gi... 56 8e-06
ref|XP_002311305.1| zinc finger family protein [Populus trichoca... 56 8e-06
>ref|XP_006338779.1| PREDICTED: E3 ubiquitin-protein ligase RNF126-like [Solanum
tuberosum]
Length = 149
Score = 79.0 bits (193), Expect = 9e-13
Identities = 43/81 (53%), Positives = 54/81 (66%)
Frame = -1
Query: 243 FRELDLMEQDQRSYVYVDPRSRGSSTRSTAQNEGPLPPTRRGSIKALPVVEIVEEEMSEC 64
FR+L LM + + SY+ + GP PP + S++ALP+V+I+EEE SEC
Sbjct: 5 FRDLTLMAR-RSSYIQYEA--------------GPSPPAAQASVEALPIVKIIEEE-SEC 48
Query: 63 AICLVEFQVGEKAKEMPCKHR 1
AICL EFQVGEKAKEMPCKHR
Sbjct: 49 AICLSEFQVGEKAKEMPCKHR 69
>gb|EOY01904.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 227
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = -1
Query: 165 RSTAQNEGPLPPTRRGSIKALPVVEIVEEEMSECAICLVEFQVGEKAKEMPCKHR 1
RS A +G PP + SI+A+P VEI E E EC +CL E++ GE AKEMPCKH+
Sbjct: 89 RSWANKDGQ-PPASKTSIEAMPSVEIGESEDGECVVCLEEWRPGEVAKEMPCKHK 142
>ref|XP_003517795.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 229
Score = 61.2 bits (147), Expect = 2e-07
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 RSTAQNEGPLPPTRRGSIKALPVVEIVEE-EMSECAICLVEFQVGEKAKEMPCKHR 1
R A +G PP + SI+ALP VEI E+ E EC +CL EF VG AKEMPCKHR
Sbjct: 83 RELANGKGGRPPASKESIEALPSVEIGEDNEDLECVVCLEEFGVGGVAKEMPCKHR 138
>ref|XP_006574908.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 303
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 RSTAQNEGPLPPTRRGSIKALPVVEIVE-EEMSECAICLVEFQVGEKAKEMPCKHR 1
R +G PP + SI+ALP VEI E E SEC +CL EF VG AKEMPCKHR
Sbjct: 157 REFTNGKGGRPPASKESIEALPSVEIGEGNEDSECVVCLEEFGVGGVAKEMPCKHR 212
>gb|ACU13632.1| unknown [Glycine max]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 RSTAQNEGPLPPTRRGSIKALPVVEIVE-EEMSECAICLVEFQVGEKAKEMPCKHR 1
R +G PP + SI+ALP VEI E E SEC +CL EF VG AKEMPCKHR
Sbjct: 85 REFTNGKGGRPPASKESIEALPSVEIGEGNEDSECVVCLEEFGVGGVAKEMPCKHR 140
>ref|XP_003613816.1| RING finger protein [Medicago truncatula]
gi|355515151|gb|AES96774.1| RING finger protein
[Medicago truncatula]
Length = 222
Score = 58.2 bits (139), Expect = 2e-06
Identities = 41/123 (33%), Positives = 58/123 (47%)
Frame = -1
Query: 369 RTLSYFDPGIDSSNFMDTRRYSESYIERPQLPLITVLRSQSRFRELDLMEQDQRSYVYVD 190
+TL+ DP +S D+ ++ P ITV+ S EL
Sbjct: 35 QTLNNSDPDHESETNEDSTPQRIIFVN-PLTQSITVIDGASSIEELF------------- 80
Query: 189 PRSRGSSTRSTAQNEGPLPPTRRGSIKALPVVEIVEEEMSECAICLVEFQVGEKAKEMPC 10
+ GSST++ PP + SI+A+ +EI E + EC +CL EF+VG KEMPC
Sbjct: 81 -NNLGSSTKNGQ------PPATKESIEAMDKIEIEEGDGGECVVCLEEFEVGGVVKEMPC 133
Query: 9 KHR 1
KHR
Sbjct: 134 KHR 136
>gb|EXC19987.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 225
Score = 57.8 bits (138), Expect = 2e-06
Identities = 35/85 (41%), Positives = 45/85 (52%)
Frame = -1
Query: 255 SQSRFRELDLMEQDQRSYVYVDPRSRGSSTRSTAQNEGPLPPTRRGSIKALPVVEIVEEE 76
+ S + L+ + V +D S S N+ PP + SIKA+ VEI E+
Sbjct: 57 NDSNHNRVILINPFTQGMVVIDGVSSLDSLLRELGNKDGQPPASKESIKAMASVEIGEDG 116
Query: 75 MSECAICLVEFQVGEKAKEMPCKHR 1
EC ICL EF+VG AKEMPCKHR
Sbjct: 117 -EECVICLEEFEVGGFAKEMPCKHR 140
>gb|AFK38844.1| unknown [Lotus japonicus]
Length = 232
Score = 57.8 bits (138), Expect = 2e-06
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = -1
Query: 159 TAQNEGPLPPTRRGSIKALPVVEIVE--EEMSECAICLVEFQVGEKAKEMPCKHR 1
+A N+G PP + SI A+P VE+ E ++ EC +CL F+VG+ KEMPCKHR
Sbjct: 86 SAANKGGRPPASKESIDAMPSVEVGEGDDDDGECVVCLEGFEVGKVVKEMPCKHR 140
>gb|EMT02218.1| RING finger protein 126 [Aegilops tauschii]
Length = 202
Score = 57.4 bits (137), Expect = 3e-06
Identities = 22/49 (44%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIV----EEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP ++ +++ALP VE+V EE+ + CA+CL ++ GE+A+E+PC+HR
Sbjct: 30 PPAKKDAVEALPTVEVVGGCNEEDAASCAVCLEDYACGERARELPCRHR 78
>ref|XP_006306505.1| hypothetical protein CARUB_v10012493mg [Capsella rubella]
gi|482575216|gb|EOA39403.1| hypothetical protein
CARUB_v10012493mg [Capsella rubella]
Length = 307
Score = 57.0 bits (136), Expect = 4e-06
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Frame = -1
Query: 153 QNEGPLPPTRRGSIKALPVV----EIVEEEMSECAICLVEFQVGEKAKEMPCKH 4
QN PP + +I ALP V EI++ EM++CA+C+ EF+ G +AK+MPCKH
Sbjct: 166 QNRYGTPPASKSAIDALPTVKVTKEILQSEMNQCAVCMDEFEDGIEAKQMPCKH 219
>gb|EMS59452.1| E3 ubiquitin-protein ligase RING1-like protein [Triticum urartu]
Length = 258
Score = 57.0 bits (136), Expect = 4e-06
Identities = 22/49 (44%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIV----EEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP ++ +++ALP VE+V EE+ + CA+CL ++ GE+A+E+PC+HR
Sbjct: 84 PPAKKDAVEALPTVEVVGGCNEEDAASCAVCLEDYASGERARELPCRHR 132
>ref|XP_004238823.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like isoform 1
[Solanum lycopersicum]
Length = 206
Score = 57.0 bits (136), Expect = 4e-06
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Frame = -1
Query: 183 SRGSSTRSTAQNE----GPLPPTRRGSIKALPVVEIVEE-EMSECAICLVEFQVGEKAKE 19
+R S+T + NE PP + SI AL VEI EE E EC+ICL ++++GE AKE
Sbjct: 74 TRSSTTLDSFLNELMSKEGQPPASKASIDALKSVEICEEGEKGECSICLDDWEIGEIAKE 133
Query: 18 MPCKHR 1
+PCKHR
Sbjct: 134 IPCKHR 139
>dbj|BAJ91076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 57.0 bits (136), Expect = 4e-06
Identities = 22/49 (44%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIV----EEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP ++ +++ALP VE+V EE+ + CA+CL ++ GE+A+E+PC+HR
Sbjct: 197 PPAKKDAVEALPTVEVVGCGNEEDAASCAVCLEDYASGERARELPCRHR 245
>gb|ABK21010.1| unknown [Picea sitchensis] gi|148908581|gb|ABR17400.1| unknown
[Picea sitchensis]
Length = 325
Score = 57.0 bits (136), Expect = 4e-06
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIVEE----EMSECAICLVEFQVGEKAKEMPCKH 4
PP R +++A+P VEI E ++S+CA+CL EF++G +A++MPCKH
Sbjct: 165 PPASRSAVEAMPAVEISESHLSSDVSQCAVCLEEFELGSEARQMPCKH 212
>gb|EMJ25125.1| hypothetical protein PRUPE_ppa011037mg [Prunus persica]
Length = 226
Score = 56.6 bits (135), Expect = 5e-06
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 GSSTRSTAQNEGPLPPTRRGSIKALPVVEIVEEEM-SECAICLVEFQVGEKAKEMPCKHR 1
G S + +G PP + SI A+P V+IVE + SEC ICL +F++ AKEMPCKHR
Sbjct: 79 GDSLQELGMKDGQ-PPASKASIDAMPCVKIVEGDGGSECVICLEQFEIDGVAKEMPCKHR 137
>gb|ACU20614.1| unknown [Glycine max]
Length = 188
Score = 56.2 bits (134), Expect = 6e-06
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIVEEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP ++ +I+ALP V I E S+C++CL +F+VG +AKEMPCKHR
Sbjct: 60 PPAQKEAIEALPTVII--NENSQCSVCLDDFEVGSEAKEMPCKHR 102
>gb|AFK42291.1| unknown [Medicago truncatula]
Length = 202
Score = 55.8 bits (133), Expect = 8e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIVEEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP + SI+A+ +EI E + EC +CL EF+VG KEMPCKHR
Sbjct: 82 PPATKESIEAMEKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHR 126
>gb|AFG56549.1| hypothetical protein 2_4925_01, partial [Pinus taeda]
Length = 135
Score = 55.8 bits (133), Expect = 8e-06
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIVEE----EMSECAICLVEFQVGEKAKEMPCKH 4
PP R +++A+ V+I +E ++S+CA+CL EF+VG +A+EMPCKH
Sbjct: 39 PPASRSAVEAMAAVKISQEHLSSDLSQCAVCLEEFEVGSEAREMPCKH 86
>ref|XP_003613818.1| RING finger protein [Medicago truncatula]
gi|355515153|gb|AES96776.1| RING finger protein
[Medicago truncatula]
Length = 218
Score = 55.8 bits (133), Expect = 8e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = -1
Query: 135 PPTRRGSIKALPVVEIVEEEMSECAICLVEFQVGEKAKEMPCKHR 1
PP + SI+A+ +EI E + EC +CL EF+VG KEMPCKHR
Sbjct: 82 PPATKESIEAMEKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHR 126
>ref|XP_002311305.1| zinc finger family protein [Populus trichocarpa]
gi|222851125|gb|EEE88672.1| zinc finger family protein
[Populus trichocarpa]
Length = 225
Score = 55.8 bits (133), Expect = 8e-06
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = -1
Query: 150 NEGPLPPTRRGSIKALPVVEIVEEEMS-ECAICLVEFQVGEKAKEMPCKHR 1
N+ PP + SI+A+P VEI E+ ECAICL E++ G KEMPCKHR
Sbjct: 86 NKNGQPPASKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHR 136