BLASTX nr result
ID: Atropa21_contig00039605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039605
(523 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 318 6e-85
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 182 5e-44
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 180 2e-43
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 178 6e-43
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 170 2e-40
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 166 3e-39
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 166 3e-39
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 160 1e-37
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 160 1e-37
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 160 2e-37
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 157 1e-36
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 155 7e-36
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 154 9e-36
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 150 1e-34
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 150 2e-34
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 150 2e-34
ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Popu... 149 5e-34
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 143 2e-32
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 139 3e-31
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 139 3e-31
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 318 bits (814), Expect = 6e-85
Identities = 150/175 (85%), Positives = 165/175 (94%), Gaps = 1/175 (0%)
Frame = -1
Query: 523 LSFREEPGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRK 344
LSFREEP S+CRR SPN+SQQLM+L+ELE+RKLFLVLSY G KKLED++SP+IADDIVRK
Sbjct: 140 LSFREEPESNCRRTSPNVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQIADDIVRK 199
Query: 343 KNLPMTDFESEIWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTT 164
KNL MTDFESEIWNAFGKA YAESDRSKY+DWNC KTH+YYCHIKQNG CTFKGPYLNT
Sbjct: 200 KNLSMTDFESEIWNAFGKAYYAESDRSKYVDWNCRKTHIYYCHIKQNGQCTFKGPYLNTA 259
Query: 163 RTHLQRALGDDNVLIVKFVEDT-CSNIIVEEGILVGLRRYRFFVYKDDKERKKNP 2
RTHLQRALGDDNVL+VKFVEDT C+N+IVEEGILVGLRRYRFFVYKDDKE+KK+P
Sbjct: 260 RTHLQRALGDDNVLLVKFVEDTSCANMIVEEGILVGLRRYRFFVYKDDKEKKKSP 314
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 182 bits (461), Expect = 5e-44
Identities = 89/164 (54%), Positives = 119/164 (72%), Gaps = 2/164 (1%)
Frame = -1
Query: 490 RRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESE 311
R ++ IS+QL+ LS+LE+RK FL+L+Y G +K+EDVI DI+ PM+ FES
Sbjct: 234 RASTRGISEQLLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESY 293
Query: 310 IWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDD 131
IWN +G C + R +YLDW+ G+THLY+CH+ +G TFKGPYL RTHLQ++LGD+
Sbjct: 294 IWNKYGHLC-EHNKRVQYLDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDE 352
Query: 130 NVLIVKFVEDT--CSNIIVEEGILVGLRRYRFFVYKDDKERKKN 5
NVLIVKF ++T C IV+ GILVGLRRYRFFVYKDD +++ +
Sbjct: 353 NVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKRSS 396
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 180 bits (456), Expect = 2e-43
Identities = 95/184 (51%), Positives = 123/184 (66%), Gaps = 16/184 (8%)
Frame = -1
Query: 505 PGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMT 326
P + R+AS S QL+ L ELE+RK FL+LSY G K+ ED++S A++I++ KNLPM
Sbjct: 90 PKKARRQAS---SPQLVALGELEFRKAFLILSYIGDKRPEDLLS---AEEILKLKNLPMG 143
Query: 325 DFESEIWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQR 146
FE+E+WN G+ E DR + DW+ KTH+Y+CH+ +G FKGPYLN TRTHLQR
Sbjct: 144 VFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQR 203
Query: 145 ALGDDNVLIVKFVED-------TCS-------NIIVEEGILVGLRRYRFFVYKD--DKER 14
LGD+N+L+VKF ED CS N I EGI VGLR+YRFFV+KD +E+
Sbjct: 204 VLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEK 263
Query: 13 KKNP 2
KKNP
Sbjct: 264 KKNP 267
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 178 bits (452), Expect = 6e-43
Identities = 87/163 (53%), Positives = 118/163 (72%), Gaps = 2/163 (1%)
Frame = -1
Query: 490 RRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESE 311
R ++ IS+QL+ L++LE+RK FL+L+Y G +K+EDVI+ DI+ PM+ FES
Sbjct: 178 RASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILDMIYQPMSHFESY 237
Query: 310 IWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDD 131
IWN +G C + R +YLDW+ G+THLY+CH+ + TFKGPYL RTHLQ +LGD+
Sbjct: 238 IWNKYGHLC-EHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLGDE 296
Query: 130 NVLIVKFVEDT--CSNIIVEEGILVGLRRYRFFVYKDDKERKK 8
NVLIVKF ++T C IV+ GILVGLRRYRFFVYKDD ++++
Sbjct: 297 NVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKKRR 339
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 170 bits (430), Expect = 2e-40
Identities = 94/192 (48%), Positives = 122/192 (63%), Gaps = 24/192 (12%)
Frame = -1
Query: 505 PGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMT 326
P + R+AS S QL+ L ELE+RK FL+LSY G + ED++S A++I++ KNLPM
Sbjct: 90 PKKARRQAS---SPQLVALGELEFRKAFLILSYIGELRPEDLLS---AEEILKLKNLPMG 143
Query: 325 DFESEIWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFK--------GPYLN 170
FE+E+WN G+ E DR + DW+ KTH+Y+CH+ +G FK GPYLN
Sbjct: 144 VFETEVWNNLGRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLN 203
Query: 169 TTRTHLQRALGDDNVLIVKFVED-------TCS-------NIIVEEGILVGLRRYRFFVY 32
TRTHLQR LGD+N+L+VKF ED CS N I EGI VGLR+YRFFV+
Sbjct: 204 KTRTHLQRVLGDENILLVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVF 263
Query: 31 KD--DKERKKNP 2
KD +E+KKNP
Sbjct: 264 KDGGKEEKKKNP 275
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 166 bits (420), Expect = 3e-39
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 16/170 (9%)
Frame = -1
Query: 463 QLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGKAC 284
Q + L ELE+RK FL+LSY G LE+VI+ AD+I ++L M FESE+W G+
Sbjct: 148 QYVALGELEFRKAFLILSYIGENSLEEVIT---ADEIRGMRDLQMARFESEVWEKLGRKN 204
Query: 283 YAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIVKFVE 104
++ DR L W+ GKTH+Y+CHI G CTFKGPYLN TRTHLQR LGDDN+L+VKF E
Sbjct: 205 ISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDE 264
Query: 103 D--------------TCSNIIVEEGILVGLRRYRFFVYKD--DKERKKNP 2
+ + N I EGILVGLR Y FFV+KD +E+KK+P
Sbjct: 265 ELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDP 314
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 166 bits (420), Expect = 3e-39
Identities = 87/170 (51%), Positives = 110/170 (64%), Gaps = 16/170 (9%)
Frame = -1
Query: 463 QLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGKAC 284
Q + L ELE+RK FL+LSY G LE+VI+ AD+I ++L M FESE+W G+
Sbjct: 150 QYVALGELEFRKAFLILSYIGENSLEEVIT---ADEIRGMRDLQMARFESEVWEKLGRKN 206
Query: 283 YAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIVKFVE 104
++ DR L W+ GKTH+Y+CHI G CTFKGPYLN TRTHLQR LGDDN+L+VKF E
Sbjct: 207 ISQEDRRMSLKWDSGKTHMYHCHISTKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDE 266
Query: 103 D--------------TCSNIIVEEGILVGLRRYRFFVYKD--DKERKKNP 2
+ + N I EGILVGLR Y FFV+KD +E+KK+P
Sbjct: 267 ELGGHRSSNNWNDSYSKYNEIAREGILVGLRCYHFFVFKDGGKEEKKKDP 316
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 160 bits (406), Expect = 1e-37
Identities = 91/175 (52%), Positives = 114/175 (65%), Gaps = 19/175 (10%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFG- 293
SQ L+ L ELE+RK FL+LSY G K LE+V+S D I K+LPM FES+IW AFG
Sbjct: 14 SQHLVALGELEFRKAFLILSYLGGKNLEEVVS---VDQIRGYKDLPMRTFESKIWEAFGC 70
Query: 292 -KACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIV 116
+ E DR KYLDW+ GKTH+Y+CH+ +G FKGPYL+ R LQR LGDDN+L+V
Sbjct: 71 RRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMV 130
Query: 115 KFVE-----DTCS----------NIIVEEGILVGLRRYRFFVYKD--DKERKKNP 2
KF E D+ S N ++ EGI VGLR YRFFV+KD +E+KK+P
Sbjct: 131 KFGEVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDP 185
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 160 bits (406), Expect = 1e-37
Identities = 91/175 (52%), Positives = 114/175 (65%), Gaps = 19/175 (10%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFG- 293
SQ L+ L ELE+RK FL+LSY G K LE+V+S D I K+LPM FES+IW AFG
Sbjct: 36 SQHLVALGELEFRKAFLILSYLGGKNLEEVVS---VDQIRGYKDLPMRTFESKIWEAFGC 92
Query: 292 -KACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIV 116
+ E DR KYLDW+ GKTH+Y+CH+ +G FKGPYL+ R LQR LGDDN+L+V
Sbjct: 93 RRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQRTLGDDNILMV 152
Query: 115 KFVE-----DTCS----------NIIVEEGILVGLRRYRFFVYKD--DKERKKNP 2
KF E D+ S N ++ EGI VGLR YRFFV+KD +E+KK+P
Sbjct: 153 KFGEVKDDRDSGSRSLDDYFSKYNKVLGEGIHVGLRCYRFFVFKDGGKEEKKKDP 207
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 160 bits (404), Expect = 2e-37
Identities = 89/182 (48%), Positives = 114/182 (62%), Gaps = 19/182 (10%)
Frame = -1
Query: 490 RRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESE 311
R + SQ L+ L ELE+RK FL+L+Y G K LE+V+S AD I K+LPM FES+
Sbjct: 7 RGSESTTSQHLVALGELEFRKAFLILNYLGGKNLEEVVS---ADQIRGYKDLPMETFESK 63
Query: 310 IWNAFG--KACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALG 137
IW+AFG + E DR KYLDW+ GK H+Y+CH+ +G FKGPYL+ R LQR LG
Sbjct: 64 IWDAFGCRRDYIKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLG 123
Query: 136 DDNVLIVKFVEDTCS---------------NIIVEEGILVGLRRYRFFVYKD--DKERKK 8
DDN+L+VKF E N ++ EGI VGLR YRFFV+KD +E+KK
Sbjct: 124 DDNILMVKFEEVKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFFVFKDGGKEEKKK 183
Query: 7 NP 2
+P
Sbjct: 184 DP 185
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 157 bits (397), Expect = 1e-36
Identities = 87/173 (50%), Positives = 112/173 (64%), Gaps = 17/173 (9%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGK 290
S L L E+E+RK FL LSY G + LE+V S AD I K+LPM FE IW AFGK
Sbjct: 106 SSALHALGEMEFRKAFLCLSYIGRESLENVAS---ADCIRSLKDLPMATFEKTIWEAFGK 162
Query: 289 A-CYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIVK 113
Y++SDR Y+DW+ G+TH+Y C++ +G FKGP L +T+THLQR+LGDDNVL+VK
Sbjct: 163 DHIYSQSDRQVYVDWDSGRTHVYQCYVSSDGSLRFKGPILQSTQTHLQRSLGDDNVLLVK 222
Query: 112 FVEDTCSNII--------------VEEGILVGLRRYRFFVYKD--DKERKKNP 2
F E+ +N I +EGI VGLR YRFFV+KD +E+KK+P
Sbjct: 223 FAENGIANNIRTSAEEAYRLYGKFGKEGINVGLRLYRFFVFKDGGKEEKKKDP 275
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 155 bits (391), Expect = 7e-36
Identities = 96/189 (50%), Positives = 114/189 (60%), Gaps = 15/189 (7%)
Frame = -1
Query: 523 LSFREEPGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRK 344
LSF EEP S+CRR SP +SQQLM+L+ELE+RKLFLVLSY G KLEDVISP+IADDIVRK
Sbjct: 138 LSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRK 197
Query: 343 KNLPMTDFESEIWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTT 164
KNL MTDFESEIWNAFGKACYA SDRSK KT + T+ +
Sbjct: 198 KNLSMTDFESEIWNAFGKACYAVSDRSK-----DDKTAVRI-------VATYDVVDARPS 245
Query: 163 RTHLQRALGDDNVLIVKFVEDT---------CSNIIVEEGILVGLRRYRFF------VYK 29
R + +G +K V+ + C I E G+ + +F VYK
Sbjct: 246 RMAGSQPMGGPKEFSMKLVQASKCWTTVKAVCVRKISESGLKSPVENRSWFSSLEQGVYK 305
Query: 28 DDKERKKNP 2
DDKERKK+P
Sbjct: 306 DDKERKKSP 314
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 154 bits (390), Expect = 9e-36
Identities = 83/169 (49%), Positives = 107/169 (63%), Gaps = 16/169 (9%)
Frame = -1
Query: 460 LMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGKACY 281
L L ELEYR+ FL+LSY G KL D+I +A+ I K+LPM FES +W G+ C
Sbjct: 548 LAALGELEYRRQFLILSYAGGMKLRDLI---VAEAIRHWKDLPMVMFESTVWEHLGRKCI 604
Query: 280 AESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYL-NTTRTHLQRALGDDNVLIVKFVE 104
+ DR Y DW+ G TH+Y+C++ +G FKGPYL RT LQ+ LGDDNVL+VKF +
Sbjct: 605 STEDRRLYFDWDSGSTHVYHCYVNVDGSYRFKGPYLYKIRRTLLQKELGDDNVLMVKFAK 664
Query: 103 D--------TCSNI-----IVEEGILVGLRRYRFFVYKD--DKERKKNP 2
+ C N + EGILVGLRRYRFFV+KD ++E+KKNP
Sbjct: 665 EEVQRGQSGACHNYPTYMKVAREGILVGLRRYRFFVFKDGGNEEKKKNP 713
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 150 bits (380), Expect = 1e-34
Identities = 87/184 (47%), Positives = 113/184 (61%), Gaps = 18/184 (9%)
Frame = -1
Query: 499 SSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRK-KNLPMTD 323
S R P S L L ELE+RK FL+LSY G + LE+ I+ D +R K+LPM
Sbjct: 110 SPTRPPRPTPSSLLHALGELEFRKAFLILSYIGRESLENCIT----DAKIRSLKDLPMAK 165
Query: 322 FESEIWNAFGKAC-YAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQR 146
FE IW FG+ C Y +SDR + DWN G+TH+Y C + +G FKGP L +TRTHLQ+
Sbjct: 166 FEKTIWEDFGEKCIYDQSDRQLHRDWNSGRTHVYQCFVFPDGNLRFKGPILQSTRTHLQK 225
Query: 145 ALGDDNVLIVKFVEDTC----------SNIIV----EEGILVGLRRYRFFVYKD--DKER 14
LGDDNVL+VKF ED +N + +EGI VGLR YRFFV+KD ++E+
Sbjct: 226 TLGDDNVLLVKFAEDGSGKNFRTHAEEANALYGKFGKEGIRVGLRLYRFFVFKDGGNEEK 285
Query: 13 KKNP 2
+K+P
Sbjct: 286 QKDP 289
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 150 bits (379), Expect = 2e-34
Identities = 81/184 (44%), Positives = 106/184 (57%), Gaps = 16/184 (8%)
Frame = -1
Query: 505 PGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMT 326
PG+ N Q+ L ELE+RK FL+L+Y G +L+ V + A++I KNL M
Sbjct: 106 PGTFANSQGAN-GAQMEALGELEFRKQFLILNYIGRNELQSVTT---AEEIRSLKNLSMV 161
Query: 325 DFESEIWNAFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQR 146
FE ++W FG+ + DR Y DW+ GKTH+Y CH+ G FKGPYL + HLQ+
Sbjct: 162 QFEKQVWQRFGEKYVDQEDRRIYHDWDSGKTHIYRCHVSPEGSFRFKGPYLEKPKKHLQK 221
Query: 145 ALGDDNVLIVKFVEDTCSNI--------------IVEEGILVGLRRYRFFVYKD--DKER 14
LGDDNVL+VKF E+ I EGILVGLRRY FFV+KD +E+
Sbjct: 222 VLGDDNVLMVKFAEEEAERFSIGSRDHYYAGYSKICREGILVGLRRYCFFVFKDGGKEEK 281
Query: 13 KKNP 2
KK+P
Sbjct: 282 KKDP 285
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 150 bits (379), Expect = 2e-34
Identities = 79/176 (44%), Positives = 109/176 (61%), Gaps = 16/176 (9%)
Frame = -1
Query: 481 SPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWN 302
SP + + + ++ L++ K+ ED++S A++I++ KNLPM FE+E+WN
Sbjct: 458 SPPLPYHDPIAAPSSVKEADLLIQQIEIKRPEDLLS---AEEILKLKNLPMGVFETEVWN 514
Query: 301 AFGKACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVL 122
G+ E DR + DW+ KTH+Y+CH+ +G FKGPYLN TRTHLQR LGD+N+L
Sbjct: 515 NLGRKFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENIL 574
Query: 121 IVKFVED-------TCS-------NIIVEEGILVGLRRYRFFVYKD--DKERKKNP 2
+VKF ED CS N I EGI VGLR+YRFFV+KD +E+KKNP
Sbjct: 575 LVKFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP 630
>ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Populus trichocarpa]
Length = 305
Score = 149 bits (375), Expect = 5e-34
Identities = 82/161 (50%), Positives = 100/161 (62%), Gaps = 17/161 (10%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFG- 293
SQ L+ L ELE+RK FL+LSY G K LE+V+S D I K+LPM FES+IW AFG
Sbjct: 147 SQHLVALGELEFRKAFLILSYLGGKNLEEVVS---VDQIRGYKDLPMRTFESKIWEAFGC 203
Query: 292 -KACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDDNVLIV 116
+ E DR KYLDW+ GKTH+Y+CH+ +G FKGPYL+ R LQR LGDDN+L+V
Sbjct: 204 RRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKQRNVLQRTLGDDNILMV 263
Query: 115 KFVEDTCS---------------NIIVEEGILVGLRRYRFF 38
KF E N ++ EGI VGLR YRFF
Sbjct: 264 KFEEVKDERYSVSSSLDNYFAKYNKVLREGIHVGLRCYRFF 304
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 143 bits (361), Expect = 2e-32
Identities = 84/192 (43%), Positives = 112/192 (58%), Gaps = 18/192 (9%)
Frame = -1
Query: 523 LSFREEPGSSCRRASPNISQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRK 344
L R + S A P S L L ELE+RK FL++SY G + +E+V++ A+ +
Sbjct: 113 LPLRSQSLPSSSTAPPPHSDVLTALGELEFRKSFLLMSYAGRENIENVVT---AEYVRSL 169
Query: 343 KNLPMTDFESEIWNAFGKACYAE--SDRSKYLDWNCGKTHLYYCHIKQNGYCTFKGPYLN 170
K L M +FE EIW G+ Y E +DR YLDW+ G+TH+Y C + NG FKGP L
Sbjct: 170 KELTMKNFEKEIWETVGQK-YIERPTDRLVYLDWDSGRTHIYQCFVSPNGSLRFKGPILQ 228
Query: 169 TTRTHLQRALGDDNVLIVKFVEDTCS--------------NIIVEEGILVGLRRYRFFVY 32
TRTHLQ++LGDDNVL+VKF ED + +EG+ VGLR YRFFV+
Sbjct: 229 HTRTHLQKSLGDDNVLLVKFAEDQYARKSETSAQKAAKHYEKFGKEGLRVGLRLYRFFVF 288
Query: 31 K--DDKERKKNP 2
K +E+KK+P
Sbjct: 289 KVGGKEEKKKDP 300
>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
Length = 1153
Score = 139 bits (351), Expect = 3e-31
Identities = 77/169 (45%), Positives = 107/169 (63%), Gaps = 15/169 (8%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGK 290
S Q++ L EL +RK+F+V +Y S+K+E+V+S D I K L M FES+IW FG
Sbjct: 289 SPQMLALEELGFRKIFMVFAYLASEKIENVLS---VDYIRSLKFLSMAQFESQIWRTFGH 345
Query: 289 ACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCT---FKGPYLNTTRTHLQRALGDDNVLI 119
A SDR+K LD + G T +Y+C++ G FKGPY+ TRTHLQ+ +GDDNVL+
Sbjct: 346 KYIAASDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLQKVVGDDNVLV 405
Query: 118 VKF---VEDTCSNI---------IVEEGILVGLRRYRFFVYKDDKERKK 8
VKF + DT ++ + E+GI++GLRRYRFFVYKD + +K
Sbjct: 406 VKFMGKLSDTKTDFSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEK 454
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 139 bits (351), Expect = 3e-31
Identities = 77/169 (45%), Positives = 107/169 (63%), Gaps = 15/169 (8%)
Frame = -1
Query: 469 SQQLMVLSELEYRKLFLVLSYTGSKKLEDVISPKIADDIVRKKNLPMTDFESEIWNAFGK 290
S Q++ L EL +RK+F+V +Y S+K+E+V+S D I K L M FES+IW FG
Sbjct: 343 SPQMLALEELGFRKIFMVFAYLASEKIENVLS---VDYIRSLKFLSMAQFESQIWRTFGH 399
Query: 289 ACYAESDRSKYLDWNCGKTHLYYCHIKQNGYCT---FKGPYLNTTRTHLQRALGDDNVLI 119
A SDR+K LD + G T +Y+C++ G FKGPY+ TRTHLQ+ +GDDNVL+
Sbjct: 400 KYIAASDRAKNLDSDPGMTKVYHCNVAIRGDTVVKIFKGPYIENTRTHLQKVVGDDNVLV 459
Query: 118 VKF---VEDTCSNI---------IVEEGILVGLRRYRFFVYKDDKERKK 8
VKF + DT ++ + E+GI++GLRRYRFFVYKD + +K
Sbjct: 460 VKFMGKLSDTKTDFSTYCEHYHKVAEDGIVLGLRRYRFFVYKDGGKEEK 508