BLASTX nr result
ID: Atropa21_contig00039499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039499
(704 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 104 3e-20
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 79 1e-19
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 59 5e-15
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 83 7e-14
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 80 8e-13
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 67 1e-11
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 56 6e-08
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 62 2e-07
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 104 bits (259), Expect = 3e-20
Identities = 50/129 (38%), Positives = 84/129 (65%)
Frame = +1
Query: 259 MFMKARVKNFKCAPYNWVDLLKALHSYSSRLKITKVYWRPLDIRWIKMQH*WGI*R*PGR 438
+ +K R ++ K PYNW +++AL++Y+ + K+TKV W+ D IK++ P R
Sbjct: 3136 LLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQIKIK------TDPRR 3189
Query: 439 SSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEAEAILQGLRYVKRMQIPQIILKTGSIL 618
SSW +C+RD GD++ Q E+ E +NT+AEA AILQ L++++ Q+ ++++KT S+L
Sbjct: 3190 SSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQMDRVVIKTDSLL 3249
Query: 619 MQNIIEKRW 645
NI++K W
Sbjct: 3250 TNNIVDKSW 3258
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 78.6 bits (192), Expect(2) = 1e-19
Identities = 42/158 (26%), Positives = 80/158 (50%)
Frame = +1
Query: 181 KRRNTLLHGGKVCVNNLK*KIMHTLIMFMKARVKNFKCAPYNWVDLLKALHSYSSRLKIT 360
KRRN L H + + ++ + +K++ K + W +++ L+ Y ++ +
Sbjct: 637 KRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVL 696
Query: 361 KVYWRPLDIRWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEA 540
+V W+P D ++K PG SS+ +C+RD GDLI+ + + +N AE
Sbjct: 697 RVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGI--GIATNMEAET 754
Query: 541 EAILQGLRYVKRMQIPQIILKTGSILMQNIIEKRWNSP 654
AIL LR ++ ++I++T S+ ++ II++ W P
Sbjct: 755 VAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVP 792
Score = 44.7 bits (104), Expect(2) = 1e-19
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +3
Query: 3 FLNVNLVQEIWKHFCGLASVSIAGLQLTQVITTWCEASVNHHIKMIYQVVPTVIVWDL 176
F + ++W++F A ++I G+ L Q+I +W + ++ IY+ +P +I+W L
Sbjct: 578 FPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTL 635
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 58.9 bits (141), Expect(2) = 5e-15
Identities = 43/158 (27%), Positives = 72/158 (45%)
Frame = +1
Query: 181 KRRNTLLHGGKVCVNNLK*KIMHTLIMFMKARVKNFKCAPYNWVDLLKALHSYSSRLKIT 360
KRRN L HG NNL ++ L + + P W D++ L + +L
Sbjct: 97 KRRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYL 156
Query: 361 KVYWRPLDIRWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEA 540
V W+P + + P SS+ +CLR++ GDL++ Q E++E +N EA
Sbjct: 157 PVCWKPPE-GILTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQEG--TNLEVEA 213
Query: 541 EAILQGLRYVKRMQIPQIILKTGSILMQNIIEKRWNSP 654
AI + L + + + L+T S ++ I+ + W P
Sbjct: 214 VAIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEVP 251
Score = 48.5 bits (114), Expect(2) = 5e-15
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 3 FLNVNLVQEIWKHFCGLASVSIAGLQLTQVITTWCEASVNHHIKMIYQVVPTVIVWDL 176
FL ++W F +A +S+ GLQL+QV+ W + +K + +VVPTV++W+L
Sbjct: 38 FLTFYTAAKLWILFANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNL 95
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 83.2 bits (204), Expect = 7e-14
Identities = 45/149 (30%), Positives = 77/149 (51%)
Frame = +1
Query: 208 GKVCVNNLK*KIMHTLIMFMKARVKNFKCAPYNWVDLLKALHSYSSRLKITKVYWRPLDI 387
G + N L ++ + F ++ + K P NW D++K L +Y R+ K+ W P +
Sbjct: 680 GNMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNS 739
Query: 388 RWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEAEAILQGLRY 567
K PG+SS++YCLRD G+LI+ Q E+ E +N AEA AI + + +
Sbjct: 740 NTRKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPET--TNVEAEAVAIKEAIYH 797
Query: 568 VKRMQIPQIILKTGSILMQNIIEKRWNSP 654
++ ++T S+L++NI++ W P
Sbjct: 798 CTTRGFSRVTIETDSLLLKNILQGNWEIP 826
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 79.7 bits (195), Expect = 8e-13
Identities = 45/158 (28%), Positives = 75/158 (47%)
Frame = +1
Query: 181 KRRNTLLHGGKVCVNNLK*KIMHTLIMFMKARVKNFKCAPYNWVDLLKALHSYSSRLKIT 360
KRRN+ HG + NN+ + L + + K Y+W ++ L +Y L
Sbjct: 608 KRRNSYRHGKETTYNNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYK 667
Query: 361 KVYWRPLDIRWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEA 540
V WR W+ P SS+ YC+RD NGDL++ + H + E +N AEA
Sbjct: 668 VVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGET--TNMEAEA 725
Query: 541 EAILQGLRYVKRMQIPQIILKTGSILMQNIIEKRWNSP 654
+ + L++ + ++ L+T S+ +QN+I + W P
Sbjct: 726 TTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIP 763
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 67.0 bits (162), Expect(2) = 1e-11
Identities = 43/160 (26%), Positives = 77/160 (48%)
Frame = +1
Query: 175 SSKRRNTLLHGGKVCVNNLK*KIMHTLIMFMKARVKNFKCAPYNWVDLLKALHSYSSRLK 354
S K RNT+ HGGK+ N+ +I + R + P +W ++K +Y S L
Sbjct: 66 SWKGRNTVKHGGKISRYNMLAEITRNIHNLAMVRYPWLRNIPKDWSMMVKFFENYISVLA 125
Query: 355 ITKVYWRPLDIRWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRA 534
+YW P ++ K P S+ +C+R+ NG+ I+T E+ ++ A
Sbjct: 126 TKVIYWVPPNMGVYKCNTDCASKGNPRPSAGGFCIRNWNGEFIYTTSQEL--GFKTSLEA 183
Query: 535 EAEAILQGLRYVKRMQIPQIILKTGSILMQNIIEKRWNSP 654
E A +GL++ + +IL+T S+++ I++ W +P
Sbjct: 184 EVIAFERGLQFCMSHNLLPVILETDSLIVSKILDGIWETP 223
Score = 29.3 bits (64), Expect(2) = 1e-11
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 3 FLNVNLVQEIWKHFCGLASVSIAGLQLTQVITTWCEASVNHHIKMIYQVVPTVIVWD 173
F+ + Q +W A + LQL I W A+ + ++ ++ +P I+W+
Sbjct: 9 FVACHKAQFLWNMVGRAAGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWE 65
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 56.2 bits (134), Expect(2) = 6e-08
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 430 PGRSSWSYCLRDANGDLIFTQLHEMKEDNYSNTRAEAEAILQGLRYVKRMQIPQIILKTG 609
PG S++ YCLR++NGDLI + +N AE AIL+ +RY ++ +IIL++
Sbjct: 39 PGISAYGYCLRNSNGDLIHVTAENIGIT--TNVEAEMRAILEAIRYCVNKKMRKIILESD 96
Query: 610 SILMQNIIEKRW 645
S+LM II + W
Sbjct: 97 SLLMVKIINEAW 108
Score = 27.3 bits (59), Expect(2) = 6e-08
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 398 KCNTDGASRGN 430
KCNTDGAS+GN
Sbjct: 28 KCNTDGASKGN 38
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 62.0 bits (149), Expect = 2e-07
Identities = 33/113 (29%), Positives = 60/113 (53%)
Frame = +1
Query: 316 LLKALHSYSSRLKITKVYWRPLDIRWIKMQH*WGI*R*PGRSSWSYCLRDANGDLIFTQL 495
++ L SY L V W+P +I WIK P +SS+ +C+R+ G+L++ ++
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60
Query: 496 HEMKEDNYSNTRAEAEAILQGLRYVKRMQIPQIILKTGSILMQNIIEKRWNSP 654
+ +N AE+ AI + L+Y Q+ L+T S+ ++NI+ + W +P
Sbjct: 61 QSIGVT--TNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTP 111