BLASTX nr result
ID: Atropa21_contig00039292
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00039292 (494 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006364143.1| PREDICTED: probable DEAD-box ATP-dependent R... 74 1e-23 ref|XP_004252645.1| PREDICTED: probable DEAD-box ATP-dependent R... 69 4e-22 >ref|XP_006364143.1| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like [Solanum tuberosum] Length = 832 Score = 74.3 bits (181), Expect(2) = 1e-23 Identities = 35/51 (68%), Positives = 40/51 (78%), Gaps = 1/51 (1%) Frame = -1 Query: 203 YRCYSTDMKNGDRLRKFDFTKN-SSTSEGKSNPEGLVVKGDDRKARWPRFR 54 +RCYS D NG+RLRK DFT+N SS SE KS GLVVKGD+RK +WPRFR Sbjct: 221 FRCYSVDRMNGNRLRKLDFTRNESSESEDKSRSVGLVVKGDERKTKWPRFR 271 Score = 60.8 bits (146), Expect(2) = 1e-23 Identities = 32/91 (35%), Positives = 50/91 (54%) Frame = -2 Query: 469 NDIVDNSNFRDARYSDVLRNYNFEKARHCCTNVDAKSRDVSRIYNFQRERYFSANVRNDI 290 ++ +D RD ++SDV R+Y+F++ARH CTNV ++ R N Sbjct: 140 SESIDLRKLRDTKFSDVPRSYSFQQARHFCTNVRDVIAEICRTRN------------PAC 187 Query: 289 AENWRNRIPTYFLMFGWRMVNTENRXYRNID 197 +++W + FLMFGWR+ NTENR N++ Sbjct: 188 SDSWSRQ--NKFLMFGWRLGNTENRNVNNLN 216 >ref|XP_004252645.1| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like, partial [Solanum lycopersicum] Length = 825 Score = 68.9 bits (167), Expect(2) = 4e-22 Identities = 35/54 (64%), Positives = 40/54 (74%), Gaps = 1/54 (1%) Frame = -1 Query: 203 YRCYSTDMKNGDRLRKFDFTKN-SSTSEGKSNPEGLVVKGDDRKARWPRFRHNP 45 YRCYS D NG++LRK DFT+N SS SE K GLVVKG+ RKA+WPRFR P Sbjct: 215 YRCYSVDRMNGNKLRKLDFTRNESSQSEDKLRSVGLVVKGE-RKAKWPRFRPKP 267 Score = 61.2 bits (147), Expect(2) = 4e-22 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 9/67 (13%) Frame = -2 Query: 370 DAKSRDVSRIYNFQRERYFSANVRNDIAENWRNRIPTY---------FLMFGWRMVNTEN 218 D K DV R Y+FQ+ R F N+ + AEN R R PT+ FLMFGWR+VN EN Sbjct: 144 DTKFNDVPRSYSFQKARNFCTNISDVFAENCRTRNPTFSDSWSRQNKFLMFGWRLVNIEN 203 Query: 217 RXYRNID 197 R N++ Sbjct: 204 RNVNNLN 210