BLASTX nr result
ID: Atropa21_contig00039258
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039258
(740 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 97 8e-30
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 88 2e-29
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 88 4e-29
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 81 2e-28
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 86 7e-28
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 82 9e-28
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 86 1e-27
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 86 4e-27
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 94 4e-27
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 89 6e-27
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 77 7e-27
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 78 2e-26
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 88 2e-26
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 88 2e-26
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 87 3e-26
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 87 3e-26
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 85 5e-26
emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera] 78 5e-26
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 78 6e-26
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 82 8e-26
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 96.7 bits (239), Expect(2) = 8e-30
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +1
Query: 10 GIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPSK 189
GI+H T+C TPQ N +VERK+RHLLE R L +Q +P +WGDC+L AT+LIN FPSK
Sbjct: 158 GIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRFPSK 217
Query: 190 VLKGQSPYQYSLVGN--QFSHLE 252
VL G+ PYQ L G+ +SHL+
Sbjct: 218 VLNGKCPYQV-LFGSLPDYSHLK 239
Score = 60.8 bits (146), Expect(2) = 8e-30
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQFHEN 409
L+SFG LC+ STL++ R K RA P VF+GYP +KGYK+LN VSRDV+F E+
Sbjct: 238 LKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKVLNLQTSQVIVSRDVKFFES 297
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 88.2 bits (217), Expect(2) = 2e-29
Identities = 40/69 (57%), Positives = 48/69 (69%)
Frame = +1
Query: 10 GIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPSK 189
GI+H SC TP N VERK++HLL AR L FQ K+P+SYW DC+L THLIN PS
Sbjct: 647 GIIHQLSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSS 706
Query: 190 VLKGQSPYQ 216
+L Q+PYQ
Sbjct: 707 ILNNQTPYQ 715
Score = 67.8 bits (164), Expect(2) = 2e-29
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Frame = +2
Query: 236 SFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQ 397
+++ + FG LC+AST++ RGKF RA C+F+GYP KGYK+L+ FVSR+V
Sbjct: 723 NYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNVJ 782
Query: 398 FHEN 409
FHE+
Sbjct: 783 FHES 786
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 88.2 bits (217), Expect(2) = 4e-29
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +1
Query: 10 GIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPSK 189
GI+H TSC TPQ N VERK+RH+L AR FQ +P+ +WG+ IL ATHLIN PS
Sbjct: 642 GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSA 701
Query: 190 VLKGQSPYQ 216
VLKG++PY+
Sbjct: 702 VLKGKTPYE 710
Score = 67.0 bits (162), Expect(2) = 4e-29
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Frame = +2
Query: 236 SFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQ 397
S+ LRSFG LCYA + + KF R+R CVFIGYP GKK +++ + F SRDV+
Sbjct: 718 SYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVR 777
Query: 398 FHEN 409
FHE+
Sbjct: 778 FHED 781
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 81.3 bits (199), Expect(2) = 2e-28
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = +1
Query: 1 AVQGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIF 180
A +GI+ SC TP+ N +VERK++H+L AR L FQ +VP+S WGDC+L A LIN
Sbjct: 695 AEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRT 754
Query: 181 PSKVLKGQSPYQ 216
PS++L ++PY+
Sbjct: 755 PSQLLMNKTPYE 766
Score = 71.2 bits (173), Expect(2) = 2e-28
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 6/62 (9%)
Frame = +2
Query: 239 FHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQF 400
+ LR+FG LCY+ST + R KF R+R C+F+GYP G KGYKL++ F+SR+VQF
Sbjct: 775 YEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQF 834
Query: 401 HE 406
HE
Sbjct: 835 HE 836
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 85.5 bits (210), Expect(2) = 7e-28
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
QG++H SC ATP+ N VERK+RHLL AR L FQ +PI +WG+C+L A +LIN PS
Sbjct: 531 QGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTPS 590
Query: 187 KVLKGQSPYQ 216
VL +PY+
Sbjct: 591 SVLNDSTPYE 600
Score = 65.5 bits (158), Expect(2) = 7e-28
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Frame = +2
Query: 239 FHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQF 400
F LR FG LCYA ++G KF ER+R CVF+GYP G+KG++L + FVSRDV F
Sbjct: 609 FDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVF 668
Query: 401 HE 406
E
Sbjct: 669 SE 670
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 82.0 bits (201), Expect(2) = 9e-28
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +1
Query: 1 AVQGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIF 180
A GI+ SC TP+ N +VERK++H+L AR L FQ +P+ +WGDC+L A LIN
Sbjct: 681 AAHGIVAYHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRL 740
Query: 181 PSKVLKGQSPYQ 216
P+ VL +SPY+
Sbjct: 741 PTPVLNNKSPYE 752
Score = 68.6 bits (166), Expect(2) = 9e-28
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 6/64 (9%)
Frame = +2
Query: 236 SFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQ 397
++ +L++FG LCY+ST + R KF+ RAR CVF+GYP G KGYKLL+ +SR V
Sbjct: 760 AYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVI 819
Query: 398 FHEN 409
FHE+
Sbjct: 820 FHED 823
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 85.5 bits (210), Expect(2) = 1e-27
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+ SC TPQ N +VERK++H+L AR LFFQ +PISYWGDCIL A +LIN P+
Sbjct: 546 KGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPA 605
Query: 187 KVLKGQSPYQ 216
+L+ + P++
Sbjct: 606 PILEDKCPFE 615
Score = 64.7 bits (156), Expect(2) = 1e-27
Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Frame = +2
Query: 236 SFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQ 397
++ ++ FG LCYAST + R KF RA+ C FIGYP G KGYKLL+ VSR V
Sbjct: 623 TYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVV 682
Query: 398 FHE 406
FHE
Sbjct: 683 FHE 685
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 85.5 bits (210), Expect(2) = 4e-27
Identities = 37/73 (50%), Positives = 50/73 (68%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
QG++H SC TPQ N +VERK++HLL AR L FQ VP+ YW DC+L A +LIN PS
Sbjct: 639 QGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPS 698
Query: 187 KVLKGQSPYQYSL 225
+L ++P++ L
Sbjct: 699 PLLDNKTPFELLL 711
Score = 62.8 bits (151), Expect(2) = 4e-27
Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Frame = +2
Query: 266 LCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQFHE 406
LCYAST R KF RARPCVF+GYP G KGYK+L+ ++R+V FHE
Sbjct: 724 LCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHE 776
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 93.6 bits (231), Expect(2) = 4e-27
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+H SC TPQ N +VERK+++LLE AR L FQ K+P+ YWG+C+L AT+LIN P+
Sbjct: 742 KGIIHQKSCPYTPQQNGVVERKHKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPT 801
Query: 187 KVLKGQSPYQYSLVGNQF-SHLE 252
K+L+G+SPY+ F SHL+
Sbjct: 802 KLLQGKSPYELLYQKKPFYSHLK 824
Score = 54.7 bits (130), Expect(2) = 4e-27
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQFHE 406
L++FG LC+ +TL + KF+ R P +FIGYP KGYK+LN V RDV F+E
Sbjct: 823 LKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVFRDVFFYE 881
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 89.4 bits (220), Expect(2) = 6e-27
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+H +C TPQ N +VERK++HLLE AR L FQ K+P+ YWG+CIL AT++IN PS
Sbjct: 672 KGIVHQKTCPYTPQQNGVVERKHKHLLETARALLFQSKLPVKYWGECILCATYIINRLPS 731
Query: 187 KVLKGQSPYQ 216
VL + PY+
Sbjct: 732 TVLNQKCPYE 741
Score = 58.5 bits (140), Expect(2) = 6e-27
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQFHEN 409
+RSFG LCY + R KF+ R P +FIGYP KGYK+L+ V RDV FHEN
Sbjct: 753 MRSFGCLCYPTVPIPHRAKFEPRTTPHIFIGYPHETKGYKVLSMSTGKIHVCRDVIFHEN 812
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 77.0 bits (188), Expect(2) = 7e-27
Identities = 33/70 (47%), Positives = 49/70 (70%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+ SC TP+ N +VERK++H+L AR L FQ ++P+SYWGDCIL A +IN PS
Sbjct: 673 KGIVAYHSCPETPEQNSVVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPS 732
Query: 187 KVLKGQSPYQ 216
V+ ++ ++
Sbjct: 733 PVISNKTLFE 742
Score = 70.5 bits (171), Expect(2) = 7e-27
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQFHEN 409
L+SFG LCYAST + R KF++RAR C F+GYP G KGYKLL+ F+SR+V F+E+
Sbjct: 754 LKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYED 813
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 78.2 bits (191), Expect(2) = 2e-26
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+ SC T + N ++ERK++HLL AR L FQ +VP+ YWGDC+L A LIN PS
Sbjct: 657 KGIVSYHSCPETLEQNSVLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPS 716
Query: 187 KVLKGQSPYQ 216
+L +SPY+
Sbjct: 717 PLLANKSPYE 726
Score = 68.2 bits (165), Expect(2) = 2e-26
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = +2
Query: 239 FHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQF 400
+ LR+FG LCY ST + R KF R+R CVF+GYP G KGYKLL+ ++SR+V F
Sbjct: 735 YDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTF 794
Query: 401 HEN 409
HE+
Sbjct: 795 HED 797
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 87.8 bits (216), Expect(2) = 2e-26
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI H TSC TP N VERK+RH+L AR L FQ +PI +WG+CIL A +LIN PS
Sbjct: 431 KGITHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPS 490
Query: 187 KVLKGQSPYQ--YSLVGNQFSHLEI 255
+L+G+SPY+ Y N +SHL +
Sbjct: 491 MLLQGKSPYEMLYKTAPN-YSHLRV 514
Score = 58.5 bits (140), Expect(2) = 2e-26
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = +2
Query: 236 SFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQ 397
++ LR FG LCYA + KF R+R CVF+GYP G+KG++L + FVSRDV
Sbjct: 508 NYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVI 567
Query: 398 FHE 406
F E
Sbjct: 568 FQE 570
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 87.8 bits (216), Expect(2) = 2e-26
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI+H SC TPQ N +VE K+++LLE AR L FQ K+P+ YWG+ +L AT+LIN P+
Sbjct: 399 KGIIHQKSCPYTPQQNGVVEMKHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRLPT 458
Query: 187 KVLKGQSPYQYSLVGNQF-SHLE 252
K+L G+SPY+ F SHL+
Sbjct: 459 KLLPGKSPYELLYQKKPFYSHLK 481
Score = 58.5 bits (140), Expect(2) = 2e-26
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQFHE 406
L++FG LC+ +TL + KF+ R P +FIGYP KGYK+LN VSRDV F+E
Sbjct: 480 LKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVSRDVSFYE 538
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 87.0 bits (214), Expect(2) = 3e-26
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI H TSC TP N VERK+RH+L AR L FQ +PI +WG+CIL A +LIN PS
Sbjct: 655 KGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPS 714
Query: 187 KVLKGQSPYQYSL-VGNQFSHLEI 255
+L+G+SPY+ ++SHL +
Sbjct: 715 MLLQGKSPYEMLYKTAPKYSHLRV 738
Score = 58.5 bits (140), Expect(2) = 3e-26
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQFHE 406
LR FG LCYA + KF R+R CVF+GYP G+KG++L + FVSRDV F E
Sbjct: 736 LRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQE 794
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 87.0 bits (214), Expect(2) = 3e-26
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+GI H TSC TP N VERK+RH+L AR L FQ +PI +WG+CIL A +LIN PS
Sbjct: 431 KGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPS 490
Query: 187 KVLKGQSPYQYSL-VGNQFSHLEI 255
+L+G+SPY+ ++SHL +
Sbjct: 491 MLLQGKSPYEMLYKTAPKYSHLRV 514
Score = 58.5 bits (140), Expect(2) = 3e-26
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDVQFHE 406
LR FG LCYA + KF R+R CVF+GYP G+KG++L + FVSRDV F E
Sbjct: 512 LRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQE 570
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 84.7 bits (208), Expect(2) = 5e-26
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 QGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPS 186
+ I+H SC T Q N +VERK+++LLE AR L FQ K+P+ YW +C+L AT+LIN P+
Sbjct: 577 KSIIHQQSCPCTQQQNGLVERKHKYLLETARALLFQSKMPMRYWVECVLTATYLINRLPT 636
Query: 187 KVLKGQSPYQYSLVGNQF-SHL 249
K+L+G+SPY+ F SHL
Sbjct: 637 KLLQGKSPYELLYQKKPFYSHL 658
Score = 60.1 bits (144), Expect(2) = 5e-26
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Frame = +2
Query: 248 LRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRDVQFHE 406
LR+FG LC+ +TL + KF+ R P +FIGYP KGYK+LN+ VSRDV F+E
Sbjct: 658 LRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFNTKGYKVLNWDTKRIHVSRDVLFYE 716
>emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera]
Length = 659
Score = 77.8 bits (190), Expect(2) = 5e-26
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 GIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPSK 189
GI+ SC TPQ N +VE ++HLL R L FQ +P++YWGD ILIAT+LIN S
Sbjct: 145 GILPFHSCVDTPQQNSVVEHNHQHLLNVVRALLFQSNIPLAYWGDYILIATYLINRIQSS 204
Query: 190 VLKGQSPYQ--YSLVGNQFSHLEI 255
+L ++P++ Y+ V +SHL I
Sbjct: 205 ILFNKTPFEILYNRV-TSYSHLHI 227
Score = 67.0 bits (162), Expect(2) = 5e-26
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 6/64 (9%)
Frame = +2
Query: 233 TSFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRDV 394
TS+ L FG LCY STL++ R K R P VF+GYP G KGYKLLN +++RDV
Sbjct: 220 TSYSHLHIFGCLCYGSTLARHRTKLSPRTIPSVFLGYPPGYKGYKLLNLSTNAIYITRDV 279
Query: 395 QFHE 406
FHE
Sbjct: 280 IFHE 283
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 77.8 bits (190), Expect(2) = 6e-26
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +1
Query: 1 AVQGIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIF 180
A G H SC TPQ N +VERK++HLL AR L FQ KVP+ +WG+C+L A +LIN
Sbjct: 508 AKTGTTHQFSCAYTPQQNSVVERKHQHLLNVARALMFQSKVPLIFWGECVLSAAYLINRT 567
Query: 181 PSKVLKGQSPY 213
P +L +P+
Sbjct: 568 PMVLLSNNTPF 578
Score = 66.6 bits (161), Expect(2) = 6e-26
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 6/65 (9%)
Frame = +2
Query: 230 ETSFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLN------FVSRD 391
+ ++ +++FG L YAST S R KFD RA+PCVF+G+P G KGY+L + F+SRD
Sbjct: 585 KADYNIIKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKFFISRD 644
Query: 392 VQFHE 406
V F E
Sbjct: 645 VLFFE 649
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 82.0 bits (201), Expect(2) = 8e-26
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +1
Query: 10 GIMH*TSCTATPQHNKIVERKYRHLLEFARGLFFQFKVPISYWGDCILIATHLINIFPSK 189
G++H SC TPQ N +VERK++H+L AR L FQ +P+ YW DC+ A LIN PS
Sbjct: 717 GMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSP 776
Query: 190 VLKGQSPYQYSL 225
+L +SPY+ L
Sbjct: 777 LLNNKSPYELIL 788
Score = 62.0 bits (149), Expect(2) = 8e-26
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = +2
Query: 230 ETSFHTLRSFGFLCYASTLSQGRGKFDERARPCVFIGYPQGKKGYKLLNF------VSRD 391
+ + L++FG LC+ ST + R KF RAR CVF+GYP G KGYK+L+ VSR+
Sbjct: 791 QPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRN 850
Query: 392 VQFHEN 409
V F E+
Sbjct: 851 VVFKEH 856