BLASTX nr result
ID: Atropa21_contig00039077
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039077
(536 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA49287.1| unnamed protein product [Oenothera berteroana] g... 62 6e-08
dbj|BAD83458.2| cytochrome c maturation protein CcmFN (mitochond... 62 6e-08
ref|YP_003587247.1| cytochrome c biogenesis FN [Citrullus lanatu... 62 6e-08
ref|YP_003587356.1| cytochrome c biogenesis FN [Cucurbita pepo] ... 61 1e-07
sp|Q04647.1|CCBS_DAUCA RecName: Full=Probable cytochrome c biosy... 61 2e-07
ref|YP_006291807.1| ccmFN gene product (mitochondrion) [Daucus c... 61 2e-07
dbj|BAO50886.1| cytochrome c biogenesis FN (mitochondrion) [Heve... 60 2e-07
ref|YP_173394.1| cytochrome c maturation protein CcmFN [Nicotian... 60 2e-07
ref|YP_008999582.1| cytochrome c biogenesis FN (mitochondrion) [... 60 2e-07
ref|YP_006460184.1| cytochrome c maturase subunit Fn (mitochondr... 60 2e-07
ref|YP_004237259.1| cytochrome c biogenesis FN (mitochondrion) [... 60 2e-07
gb|EPS74672.1| hypothetical protein M569_00047, partial [Genlise... 60 4e-07
sp|Q04648.3|CCBS_OENBE RecName: Full=Probable cytochrome c biosy... 60 4e-07
ref|YP_008999570.1| cytochrome c biogenesis FN (mitochondrion) [... 59 5e-07
ref|YP_008802513.1| cytochrome c maturation protein CcmFN (mitoc... 59 5e-07
dbj|BAD66812.1| cytochrome c biogenesis [Beta vulgaris subsp. vu... 59 7e-07
ref|YP_008964118.1| cytochrome c biogenesis Fn (mitochondrion) [... 59 7e-07
ref|YP_007905715.1| cytochrome c maturation protein CcmFN (mitoc... 59 7e-07
gb|AFI44290.1| cytochrome c biogenesis FN (mitochondrion) [Silen... 59 7e-07
ref|YP_004935347.1| cytochrome c biogenesis FN (mitochondrion) [... 59 7e-07
>emb|CAA49287.1| unnamed protein product [Oenothera berteroana]
gi|448270|prf||1916398A orf577 gene
Length = 577
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FLLCYRGRP +HN S+RGGHRET YSF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCRIPSFYGFLLCYRGRPQSHNASKRGGHRETFFYSFVLN 123
>dbj|BAD83458.2| cytochrome c maturation protein CcmFN (mitochondrion) [Nicotiana
tabacum]
Length = 574
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIM-VLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FL CYRGRP +HNVS+RGGHRET YSF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCWILSFYGFLFCYRGRPLSHNVSKRGGHRETFFYSFVLN 123
>ref|YP_003587247.1| cytochrome c biogenesis FN [Citrullus lanatus]
gi|259156766|gb|ACV96628.1| cytochrome c biogenesis FN
[Citrullus lanatus]
Length = 577
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIM-VLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FL CYRGRP +HNVS+RGGHRET YSF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCWILSFYGFLFCYRGRPQSHNVSKRGGHRETLFYSFLLN 123
>ref|YP_003587356.1| cytochrome c biogenesis FN [Cucurbita pepo]
gi|259156809|gb|ACV96670.1| cytochrome c biogenesis FN
[Cucurbita pepo]
Length = 577
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIM---VLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ +L Y FLLCYRGRP +HNVS+RGGHRET YSF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCWILSV--YGFLLCYRGRPQSHNVSKRGGHRETLFYSFLLN 123
>sp|Q04647.1|CCBS_DAUCA RecName: Full=Probable cytochrome c biosynthesis protein
gi|14004|emb|CAA49286.1| unnamed protein product [Daucus
carota] gi|448271|prf||1916398B orf579 gene
Length = 579
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*F-IMVLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSISLWCRILSFYGFLLCYRGRPQSHNVSKRGGHRETLFYSFVSN 123
>ref|YP_006291807.1| ccmFN gene product (mitochondrion) [Daucus carota subsp. sativus]
gi|374081939|gb|AEY81131.1| CcmFN (mitochondrion)
[Daucus carota subsp. sativus]
Length = 579
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPQSHNVSKRGGHRETLFYSFVSN 123
>dbj|BAO50886.1| cytochrome c biogenesis FN (mitochondrion) [Hevea brasiliensis]
Length = 577
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRIPSFYGFLLCYRGRPQSHNVSKRGGHRETFFYSFVSN 123
>ref|YP_173394.1| cytochrome c maturation protein CcmFN [Nicotiana tabacum]
Length = 574
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPLSHNVSKRGGHRETFFYSFVSN 123
>ref|YP_008999582.1| cytochrome c biogenesis FN (mitochondrion) [Vaccinium macrocarpon]
gi|549531657|gb|AGX28796.1| cytochrome c biogenesis FN
(mitochondrion) [Vaccinium macrocarpon]
Length = 579
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HN+S+RGGHRET YS +LN
Sbjct: 70 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPQSHNISKRGGHRETLFYSLVLN 125
>ref|YP_006460184.1| cytochrome c maturase subunit Fn (mitochondrion) [Mimulus guttatus]
gi|340007649|gb|AEK26513.1| cytochrome c maturase
subunit Fn (mitochondrion) [Mimulus guttatus]
Length = 577
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPKSHNVSKRGGHRETLFYSFLSN 123
>ref|YP_004237259.1| cytochrome c biogenesis FN (mitochondrion) [Ricinus communis]
gi|322394266|gb|ADW96023.1| cytochrome c biogenesis FN
(mitochondrion) [Ricinus communis]
Length = 598
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET YSF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRIPSFYGFLLCYRGRPQSHNVSKRGGHRETIFYSFVSN 123
>gb|EPS74672.1| hypothetical protein M569_00047, partial [Genlisea aurea]
Length = 580
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S +HEG + FYRFLLCYRGRP +HNVS+RGG+RET YSF+ N
Sbjct: 67 YQISGLYANHEGSILSWCRILSFYRFLLCYRGRPKSHNVSKRGGYRETIYYSFLSN 122
>sp|Q04648.3|CCBS_OENBE RecName: Full=Probable cytochrome c biosynthesis protein
Length = 577
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIM-VLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN---- 187
YQ S + +HEG ++ FY FLLCYRGRP +HNVS+RGG+RET Y F+LN
Sbjct: 68 YQISGTWSNHEGSILLWCWILSFYGFLLCYRGRPQSHNVSKRGGYRETFFYFFVLNFVKN 127
Query: 186 -LKGLLC 169
+ LLC
Sbjct: 128 FILSLLC 134
>ref|YP_008999570.1| cytochrome c biogenesis FN (mitochondrion) [Helianthus annuus]
gi|571031406|gb|AHF21051.1| cytochrome c biogenesis FN
(mitochondrion) [Helianthus annuus]
Length = 572
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRE+ YSF+ N
Sbjct: 70 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPQSHNVSKRGGHRESLFYSFVSN 125
>ref|YP_008802513.1| cytochrome c maturation protein CcmFN (mitochondrion) [Asclepias
syriaca] gi|556562351|gb|AGZ63047.1| cytochrome c
maturation protein CcmFN (mitochondrion) [Asclepias
syriaca]
Length = 592
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIM-VLDTKFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FL CYRGRP +HNVS+RGGHR + YSF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCWILSFYGFLFCYRGRPQSHNVSKRGGHRSSLFYSFVLN 123
>dbj|BAD66812.1| cytochrome c biogenesis [Beta vulgaris subsp. vulgaris]
Length = 577
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FLLCYRGR +HNVS+RGGHRE+ ++SF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCRIPSFYGFLLCYRGRSQSHNVSKRGGHRESLLFSFVLN 123
>ref|YP_008964118.1| cytochrome c biogenesis Fn (mitochondrion) [Ajuga reptans]
gi|558697216|gb|AHA84970.1| cytochrome c biogenesis Fn
(mitochondrion) [Ajuga reptans]
Length = 579
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRE+ YSF+ N
Sbjct: 66 YQISGTWSNHEGSILSWCRILSFYGFLLCYRGRPKSHNVSKRGGHRESLFYSFLSN 121
>ref|YP_007905715.1| cytochrome c maturation protein CcmFN (mitochondrion) [Liriodendron
tulipifera] gi|480541919|gb|AGJ90412.1| cytochrome c
maturation protein CcmFN (mitochondrion) [Liriodendron
tulipifera]
Length = 601
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG + FY FLLCYRGRP +HNVS+RGGHRET +SF+ N
Sbjct: 68 YQISGTWSNHEGSILSWCRIPSFYGFLLCYRGRPQSHNVSKRGGHRETFFFSFVSN 123
>gb|AFI44290.1| cytochrome c biogenesis FN (mitochondrion) [Silene vulgaris]
gi|385198432|gb|AFI44318.1| cytochrome c biogenesis FN
(mitochondrion) [Silene vulgaris]
Length = 585
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FLLCYRGR +HNVS+RGGHRE+ ++SF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCRIPSFYGFLLCYRGRSQSHNVSKRGGHRESLLFSFVLN 123
>ref|YP_004935347.1| cytochrome c biogenesis FN (mitochondrion) [Silene vulgaris]
gi|344228003|gb|AEM46188.1| cytochrome c biogenesis FN
(mitochondrion) [Silene vulgaris]
gi|385198387|gb|AFI44280.1| cytochrome c biogenesis FN
(mitochondrion) [Silene vulgaris]
Length = 585
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = -3
Query: 348 YQSSKSLLHHEG*FIMVLDT-KFYRFLLCYRGRP-NHNVSRRGGHRETKIYSFILN 187
YQ S + +HEG ++ FY FLLCYRGR +HNVS+RGGHRE+ ++SF+LN
Sbjct: 68 YQISGTWSNHEGSILLWCRIPSFYGFLLCYRGRSQSHNVSKRGGHRESLLFSFVLN 123