BLASTX nr result

ID: Atropa21_contig00039065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039065
         (483 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-contain...    77   2e-12
ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-contain...    74   2e-11

>ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum tuberosum]
          Length = 2173

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/79 (58%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = -2

Query: 227 MDFSSNVNHHHRHRQPLPFHIDLNETPLPSPREAGPGPFLEHQEPTRVKK---EPVQ-NV 60
           MD SSN+N      + LPFHIDLNETPLPSPRE   G FLEH E +R K     P Q NV
Sbjct: 1   MDCSSNLN------RALPFHIDLNETPLPSPREIERGLFLEHPESSRGKSVVTPPSQTNV 54

Query: 59  RVCSSCQSGSGRREPGQEE 3
           RVCSSC+ GS  R+  Q+E
Sbjct: 55  RVCSSCEIGSSWRKDEQKE 73


>ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum lycopersicum]
          Length = 2151

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
 Frame = -2

Query: 227 MDFSSNVNHHHRHRQPLPFHIDLNETPLPSPREAGPGPFLEHQEPTRVKK---EPVQ-NV 60
           MD SSN+N      + L FHIDLNETPLPSPRE   G F+EH E +R K     P Q NV
Sbjct: 1   MDCSSNLN------RALSFHIDLNETPLPSPREIERGLFIEHPESSRAKSVLTPPSQTNV 54

Query: 59  RVCSSCQSGSGRREPGQEE 3
           RVCSSC+ GS  R+  Q+E
Sbjct: 55  RVCSSCEIGSSWRKDEQKE 73


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