BLASTX nr result

ID: Atropa21_contig00038333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038333
         (513 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352164.1| PREDICTED: squamosa promoter-binding-like pr...   135   6e-30
ref|XP_004239238.1| PREDICTED: squamosa promoter-binding-like pr...   135   7e-30
emb|CBI27679.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr...    62   6e-08

>ref|XP_006352164.1| PREDICTED: squamosa promoter-binding-like protein 16-like isoform
           X1 [Solanum tuberosum] gi|565371134|ref|XP_006352165.1|
           PREDICTED: squamosa promoter-binding-like protein
           16-like isoform X2 [Solanum tuberosum]
           gi|565371136|ref|XP_006352166.1| PREDICTED: squamosa
           promoter-binding-like protein 16-like isoform X3
           [Solanum tuberosum]
          Length = 319

 Score =  135 bits (340), Expect = 6e-30
 Identities = 78/102 (76%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   SLLSSAPPVTREIGLSHMVQPPASVPREPQSQPVVHGLHYGGLSQYPFAQDFNSKPQDSA 181
           SLLSSAP VTREIGLSHMVQ PAS+PR  QSQ    GL Y GLS +PF QDFNSKPQDS 
Sbjct: 229 SLLSSAPAVTREIGLSHMVQQPASIPRS-QSQ----GLQYDGLSHFPFGQDFNSKPQDS- 282

Query: 182 ADSHVSNSS-PLQFHFHEMLQNAQDGSSTSVASQQTLAFMWD 304
              HVSNSS PL  HFH+MLQNAQDGSSTS  SQQTLAFMWD
Sbjct: 283 ---HVSNSSNPL--HFHDMLQNAQDGSSTSGGSQQTLAFMWD 319


>ref|XP_004239238.1| PREDICTED: squamosa promoter-binding-like protein 16-like isoform 1
           [Solanum lycopersicum] gi|460387124|ref|XP_004239239.1|
           PREDICTED: squamosa promoter-binding-like protein
           16-like isoform 2 [Solanum lycopersicum]
          Length = 312

 Score =  135 bits (339), Expect = 7e-30
 Identities = 74/101 (73%), Positives = 77/101 (76%)
 Frame = +2

Query: 2   SLLSSAPPVTREIGLSHMVQPPASVPREPQSQPVVHGLHYGGLSQYPFAQDFNSKPQDSA 181
           SLLSSAP VTREIGLSHMVQ PAS+PR        HGL Y GLS +PFAQDFNSKPQDS 
Sbjct: 222 SLLSSAPAVTREIGLSHMVQQPASIPRSQS-----HGLQYDGLSHFPFAQDFNSKPQDS- 275

Query: 182 ADSHVSNSSPLQFHFHEMLQNAQDGSSTSVASQQTLAFMWD 304
              HVSNSS    HFH+MLQNAQD SST  ASQQTLAFMWD
Sbjct: 276 ---HVSNSSS-PLHFHDMLQNAQDESSTIPASQQTLAFMWD 312


>emb|CBI27679.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/101 (40%), Positives = 53/101 (52%)
 Frame = +2

Query: 2   SLLSSAPPVTREIGLSHMVQPPASVPREPQSQPVVHGLHYGGLSQYPFAQDFNSKPQDSA 181
           SLLSS PP T+EIGLS MVQ        P +Q ++  LHY GLSQY  +Q          
Sbjct: 277 SLLSSPPPETQEIGLSRMVQQNPI----PPAQSLIPSLHYTGLSQYASSQGMGGSVGSVL 332

Query: 182 ADSHVSNSSPLQFHFHEMLQNAQDGSSTSVASQQTLAFMWD 304
                SN++    H   + Q   DGSST+ +  QTL+F W+
Sbjct: 333 VSDGSSNAN---LHCPAIFQLGPDGSSTN-SPHQTLSFSWE 369


>ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis
           vinifera] gi|147820985|emb|CAN63524.1| hypothetical
           protein VITISV_001644 [Vitis vinifera]
          Length = 389

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/101 (40%), Positives = 53/101 (52%)
 Frame = +2

Query: 2   SLLSSAPPVTREIGLSHMVQPPASVPREPQSQPVVHGLHYGGLSQYPFAQDFNSKPQDSA 181
           SLLSS PP T+EIGLS MVQ        P +Q ++  LHY GLSQY  +Q          
Sbjct: 297 SLLSSPPPETQEIGLSRMVQQNPI----PPAQSLIPSLHYTGLSQYASSQGMGGSVGSVL 352

Query: 182 ADSHVSNSSPLQFHFHEMLQNAQDGSSTSVASQQTLAFMWD 304
                SN++    H   + Q   DGSST+ +  QTL+F W+
Sbjct: 353 VSDGSSNAN---LHCPAIFQLGPDGSSTN-SPHQTLSFSWE 389


Top