BLASTX nr result
ID: Atropa21_contig00038229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00038229
(472 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat... 196 2e-48
ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera] 120 2e-25
gb|EOY03042.1| Pentatricopeptide repeat superfamily protein [The... 117 2e-24
gb|EMJ18605.1| hypothetical protein PRUPE_ppa024153mg [Prunus pe... 107 1e-21
ref|XP_006372553.1| pentatricopeptide repeat-containing family p... 106 3e-21
ref|XP_002302938.1| predicted protein [Populus trichocarpa] 106 3e-21
ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat... 102 5e-20
ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat... 102 5e-20
ref|XP_006352441.1| PREDICTED: putative pentatricopeptide repeat... 99 6e-19
gb|EPS72925.1| hypothetical protein M569_01830 [Genlisea aurea] 99 8e-19
gb|ESW13920.1| hypothetical protein PHAVU_008G237700g [Phaseolus... 87 3e-15
gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priv... 86 4e-15
gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neos... 86 7e-15
gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lamp... 86 7e-15
gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stac... 82 7e-14
gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitr... 82 7e-14
ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citr... 82 1e-13
gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, p... 82 1e-13
gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, p... 82 1e-13
>ref|XP_004250536.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Solanum lycopersicum]
Length = 608
Score = 196 bits (499), Expect = 2e-48
Identities = 102/140 (72%), Positives = 107/140 (76%)
Frame = +3
Query: 48 HQRQDSSDPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXX 227
H QDSSDPIL TLSEAIKNSPSKPLQ SLK LLPSLKP HIINLINLNPH
Sbjct: 38 HHHQDSSDPILKTLSEAIKNSPSKPLQVSLKPLLPSLKPHHIINLINLNPHSLPPSSLLS 97
Query: 228 XXXXXXXXXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQAL 407
+ S++CHTLH Y +M LFLYTHKMYPQ SFI+TIVSRKGKDSAFTVFQA
Sbjct: 98 FFTWLSTS-NPSRFCHTLHTYSSMTLFLYTHKMYPQGHSFINTIVSRKGKDSAFTVFQAF 156
Query: 408 LKAKGTNFTSFVYVFNGLID 467
LKAKGTNFTSFV V NGLID
Sbjct: 157 LKAKGTNFTSFVNVLNGLID 176
>ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera] gi|296087085|emb|CBI33459.3|
unnamed protein product [Vitis vinifera]
Length = 592
Score = 120 bits (301), Expect = 2e-25
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = +3
Query: 69 DPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXX 248
DPIL T+SEAIK SP+KPL +SLK +LPSL P H+I+LINLNPH
Sbjct: 36 DPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLST 95
Query: 249 XXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTN 428
H + ++H+YCTM FL THKM +AQS + +VSRKGK+SA +VF ++L+A+GT+
Sbjct: 96 QHH---FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTH 152
Query: 429 FTSFVY 446
++ V+
Sbjct: 153 QSNLVF 158
>emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 120 bits (301), Expect = 2e-25
Identities = 62/126 (49%), Positives = 85/126 (67%)
Frame = +3
Query: 69 DPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXX 248
DPIL T+SEAIK SP+KPL +SLK +LPSL P H+I+LINLNPH
Sbjct: 36 DPILTTISEAIKVSPTKPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLST 95
Query: 249 XXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTN 428
H + ++H+YCTM FL THKM +AQS + +VSRKGK+SA +VF ++L+A+GT+
Sbjct: 96 QHH---FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTH 152
Query: 429 FTSFVY 446
++ V+
Sbjct: 153 QSNLVF 158
>gb|EOY03042.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 658
Score = 117 bits (293), Expect = 2e-24
Identities = 63/126 (50%), Positives = 80/126 (63%)
Frame = +3
Query: 69 DPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXX 248
DPIL TLS+AI++S +KPL SLK LLPSL P H+INLI LNPH
Sbjct: 44 DPILTTLSQAIRSSQTKPLHISLKKLLPSLTPSHVINLITLNPHSLSPLSLLSFFNFLSS 103
Query: 249 XXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTN 428
+ + HTL +Y TMA FL HKM+ QAQS +H +VSRKGK SA VF ++++ KGT+
Sbjct: 104 ---HPPFRHTLRSYSTMAHFLIAHKMFHQAQSLLHFLVSRKGKGSASLVFTSIIETKGTH 160
Query: 429 FTSFVY 446
FV+
Sbjct: 161 QCGFVF 166
>gb|EMJ18605.1| hypothetical protein PRUPE_ppa024153mg [Prunus persica]
Length = 605
Score = 107 bits (268), Expect = 1e-21
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Frame = +3
Query: 63 SSDPILNTLSEAIKNSP--SKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXX 236
+ DP L+ +S+AIK + S+PL +SL+ LLPSL + +INLINLNPH
Sbjct: 45 NEDPKLSAISDAIKTTTQNSQPLDSSLRKLLPSLTARDVINLINLNPHSLSPLSLLSFFN 104
Query: 237 XXXXXXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKA 416
+ + H + +YCTMA FL H+MYPQAQS + +VSRKGK++A +VF ++L+
Sbjct: 105 WLSS---HPTFRHNIQSYCTMAHFLCAHQMYPQAQSLLRIVVSRKGKETASSVFASILET 161
Query: 417 KGTNFTSFVYVFNGLIDA 470
+GT+ ++ YVF+ L++A
Sbjct: 162 RGTHQSN--YVFDALMNA 177
>ref|XP_006372553.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550319182|gb|ERP50350.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 599
Score = 106 bits (265), Expect = 3e-21
Identities = 56/125 (44%), Positives = 76/125 (60%)
Frame = +3
Query: 72 PILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXXX 251
PIL T+SEAIKN +KPL SLK +LPS K H I+L+N NP+
Sbjct: 44 PILTTISEAIKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSY 103
Query: 252 XHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNF 431
+ HT+ +YC+M FL H+M QA+S +H +VSRKGK SA +VF ++L+ KGT
Sbjct: 104 P---TFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLS 160
Query: 432 TSFVY 446
+SFV+
Sbjct: 161 SSFVF 165
>ref|XP_002302938.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 106 bits (265), Expect = 3e-21
Identities = 56/125 (44%), Positives = 76/125 (60%)
Frame = +3
Query: 72 PILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXXX 251
PIL T+SEAIKN +KPL SLK +LPS K H I+L+N NP+
Sbjct: 44 PILTTISEAIKNIETKPLHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSY 103
Query: 252 XHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNF 431
+ HT+ +YC+M FL H+M QA+S +H +VSRKGK SA +VF ++L+ KGT
Sbjct: 104 P---TFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLS 160
Query: 432 TSFVY 446
+SFV+
Sbjct: 161 SSFVF 165
>ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 102 bits (254), Expect = 5e-20
Identities = 55/127 (43%), Positives = 74/127 (58%)
Frame = +3
Query: 66 SDPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXX 245
+DP+L +S AI N+ +KPL +SL+ LLPS KP H I+LIN NP
Sbjct: 33 ADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLS 92
Query: 246 XXXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGT 425
+ HT +YC MA FL H+M+ + QS I +VSRKGKDSA +VF A+L GT
Sbjct: 93 SIP---TFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149
Query: 426 NFTSFVY 446
++FV+
Sbjct: 150 RCSNFVF 156
>ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 102 bits (254), Expect = 5e-20
Identities = 55/127 (43%), Positives = 74/127 (58%)
Frame = +3
Query: 66 SDPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXX 245
+DP+L +S AI N+ +KPL +SL+ LLPS KP H I+LIN NP
Sbjct: 33 ADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLS 92
Query: 246 XXXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGT 425
+ HT +YC MA FL H+M+ + QS I +VSRKGKDSA +VF A+L GT
Sbjct: 93 SIP---TFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149
Query: 426 NFTSFVY 446
++FV+
Sbjct: 150 RCSNFVF 156
>ref|XP_006352441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Solanum tuberosum]
Length = 489
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = +3
Query: 297 MALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTSFVYVFNGLID 467
M LFLYTHKMYPQ SFI+TIVSRKGKDSAFTVFQA LKAKGTNFTSFV V N LID
Sbjct: 1 MTLFLYTHKMYPQGHSFINTIVSRKGKDSAFTVFQAFLKAKGTNFTSFVNVLNRLID 57
>gb|EPS72925.1| hypothetical protein M569_01830 [Genlisea aurea]
Length = 593
Score = 98.6 bits (244), Expect = 8e-19
Identities = 56/132 (42%), Positives = 80/132 (60%)
Frame = +3
Query: 75 ILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXXXX 254
++NTLSEAI+N P KPLQ+SLK LLPSL P+ + LI LNP
Sbjct: 34 VVNTLSEAIRNHPVKPLQSSLKNLLPSLTPRIVSRLIALNP-ASLSPHRLFSFFQWLSSP 92
Query: 255 HNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFT 434
+ HT+ +YCTM FL TH M +A++ + +VSRKGK+SA VF+A+++ +G
Sbjct: 93 GRCNFRHTVQSYCTMIHFLCTHGMTVEAKNLLEILVSRKGKNSAPDVFEAMMRTRGKQ-K 151
Query: 435 SFVYVFNGLIDA 470
S ++ F+GL+ A
Sbjct: 152 SDIFAFSGLMMA 163
>gb|ESW13920.1| hypothetical protein PHAVU_008G237700g [Phaseolus vulgaris]
Length = 609
Score = 86.7 bits (213), Expect = 3e-15
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Frame = +3
Query: 75 ILNTLSEAIKNSPSKPLQN-----SLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXX 239
+L +SEAI +S +K Q+ L+ +LPSL +H+ NLI LNP
Sbjct: 46 LLCAISEAIHDSQNKHNQDYSQNPRLRRILPSLTTRHVTNLITLNP---LSLSPSSLLSF 102
Query: 240 XXXXXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAK 419
Y HTLH+YCTM FLY H+M PQA S + IVSRKG +SA ++F ++L+
Sbjct: 103 FNYLASRPPYRHTLHSYCTMLHFLYLHRMLPQAHSLLSFIVSRKGSNSASSLFSSILRTL 162
Query: 420 GTNFTSFVYVFNGLIDA 470
+ S VF+ LI A
Sbjct: 163 PSRHHSAGIVFDALICA 179
>gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M P+A+S I IVSRKGKDSA VF A+L+ KGT S
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQ-RS 64
Query: 438 FVYVFNGLIDA 470
+YVF+GLI A
Sbjct: 65 DIYVFSGLITA 75
>gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M P+A++ I +VSRKGKDSA VF+A+L+AKG S
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQ-RS 64
Query: 438 FVYVFNGLIDA 470
VYVF+GLI A
Sbjct: 65 DVYVFSGLITA 75
>gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M P+A++ I +VSRKGKDSA VF+A+L+AKG S
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQ-RS 64
Query: 438 FVYVFNGLIDA 470
VYVF+GLI A
Sbjct: 65 DVYVFSGLITA 75
>gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS Y HTLH+YCTM L TH+M +A+S I +VSRKGKDSA VF+A+L+ KGT +
Sbjct: 6 NSSYRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISD 65
Query: 438 FVYVFNGLIDA 470
F YVF+GL+ A
Sbjct: 66 F-YVFSGLMIA 75
>gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 82.0 bits (201), Expect = 7e-14
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M P+A+S I +VSRKGKDSA VF +L+ KG S
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQ-RS 64
Query: 438 FVYVFNGLIDA 470
+YVF+GLI A
Sbjct: 65 DIYVFSGLITA 75
>ref|XP_006430553.1| hypothetical protein CICLE_v10011347mg [Citrus clementina]
gi|557532610|gb|ESR43793.1| hypothetical protein
CICLE_v10011347mg [Citrus clementina]
Length = 586
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Frame = +3
Query: 69 DPILNTLSEAIKNSPSKPLQNSLKTLLPSLKPQHIINLINLNPHXXXXXXXXXXXXXXXX 248
DPIL T+S+AIK++ +SL LPS+ + NLI NPH
Sbjct: 37 DPILKTISQAIKSNSL----SSLTKFLPSISSLQVTNLITRNPHSLPPHSLLSFFNFLSS 92
Query: 249 XXHNSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTN 428
H + TLHAY TM FL HKM+ QA+ +H IVS+KG S+ ++F ++L+ +GT+
Sbjct: 93 QPH---FRLTLHAYSTMVHFLVAHKMHSQARDLLHLIVSKKGMGSSASLFASILETRGTH 149
Query: 429 FTS-------FVYVFNGLID 467
VYV G +D
Sbjct: 150 LPGLVLDALMIVYVDLGFLD 169
>gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M+ +A+S I +VSRKGK SA VF A+L+ KGT S
Sbjct: 6 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ-RS 64
Query: 438 FVYVFNGLIDA 470
+YVF+GLI A
Sbjct: 65 DIYVFSGLITA 75
>gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = +3
Query: 258 NSKYCHTLHAYCTMALFLYTHKMYPQAQSFIHTIVSRKGKDSAFTVFQALLKAKGTNFTS 437
NS + HTLH+YCTM FL TH+M+ +A+S I +VSRKGK SA VF A+L+ KGT S
Sbjct: 12 NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQ-RS 70
Query: 438 FVYVFNGLIDA 470
+YVF+GLI A
Sbjct: 71 DIYVFSGLITA 81