BLASTX nr result

ID: Atropa21_contig00038201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038201
         (641 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359278.1| PREDICTED: psbB mRNA maturation factor Mbb1,...    59   1e-06
ref|XP_004237173.1| PREDICTED: psbB mRNA maturation factor Mbb1,...    58   2e-06

>ref|XP_006359278.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Solanum tuberosum]
          Length = 681

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +3

Query: 549 QNHSSSKFHISAPFRTSQTSPSHHILPPLCS 641
           QNH+ SKFH+S+PFRTSQ SPSH ILPPLCS
Sbjct: 21  QNHNPSKFHVSSPFRTSQPSPSHPILPPLCS 51


>ref|XP_004237173.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like
           [Solanum lycopersicum]
          Length = 677

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 552 NHSSSKFHISAPFRTSQTSPSHHILPPLCS 641
           NH+ SKFH+SAPFRTSQ SPSH ILPPLCS
Sbjct: 18  NHNPSKFHVSAPFRTSQPSPSHPILPPLCS 47


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