BLASTX nr result

ID: Atropa21_contig00038177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038177
         (503 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37658.1| integrase [Populus trichocarpa]                         65   7e-09
gb|ABG37655.1| integrase [Populus trichocarpa]                         64   3e-08
gb|EOY21213.1| Uncharacterized protein TCM_012596 [Theobroma cacao]    63   4e-08
gb|ABG37654.1| integrase [Populus trichocarpa]                         61   2e-07
gb|ABG37652.1| integrase [Populus trichocarpa]                         59   9e-07
ref|XP_006352955.1| PREDICTED: F-box protein At3g07870-like [Sol...    58   1e-06
ref|XP_006493043.1| PREDICTED: uncharacterized protein LOC102611...    57   2e-06
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     57   3e-06
gb|ABB55347.1| hypothetical protein 9.t00011 [Asparagus officina...    57   3e-06
gb|ABG37653.1| integrase [Populus trichocarpa]                         56   6e-06
gb|EPS63230.1| hypothetical protein M569_11557 [Genlisea aurea]        55   7e-06

>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + NFQRP +NP+S TYNPGWRNHPNFSW+
Sbjct: 118 QAHALNNFQRPNHNPYSQTYNPGWRNHPNFSWK 150


>gb|ABG37655.1| integrase [Populus trichocarpa]
          Length = 1263

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + +FQRP +NP+S TYNPGWRNHPNFSW+
Sbjct: 535 QAHALNSFQRPNHNPYSQTYNPGWRNHPNFSWK 567


>gb|EOY21213.1| Uncharacterized protein TCM_012596 [Theobroma cacao]
          Length = 498

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 501 NQAQVHQVENFQRPYNNPFSNTYNPGWRNHPNFSW 397
           N A VH V NF R  NNP+SNTYN GWRNHPNFSW
Sbjct: 145 NFASVHFVGNFNRQQNNPYSNTYNSGWRNHPNFSW 179


>gb|ABG37654.1| integrase [Populus trichocarpa]
          Length = 1136

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + +FQRP +NP+S TYNPGW NHPNFSW+
Sbjct: 30  QAHGLNSFQRPNHNPYSQTYNPGWSNHPNFSWK 62



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + +FQRP +N +S TYNPGWR+HPNFSW+
Sbjct: 738 QAHALNSFQRPNHNSYSQTYNPGWRDHPNFSWK 770


>gb|ABG37652.1| integrase [Populus trichocarpa]
          Length = 747

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + +FQRP +NP+S TYNPGWRNH NF+W+
Sbjct: 36  QAHALNSFQRPNHNPYSQTYNPGWRNHLNFNWK 68


>ref|XP_006352955.1| PREDICTED: F-box protein At3g07870-like [Solanum tuberosum]
          Length = 413

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 96 MSEYLSQELLIEIFQRLRTKSIIQCTSVCKSW 1
          MSEYL QE+LIEIF RL TKS+IQCTSVCKSW
Sbjct: 1  MSEYLPQEVLIEIFLRLPTKSLIQCTSVCKSW 32


>ref|XP_006493043.1| PREDICTED: uncharacterized protein LOC102611356 [Citrus sinensis]
          Length = 1121

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 20/33 (60%), Positives = 28/33 (84%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           QVH ++++++  NNP+S TYNP WRNHPNFSW+
Sbjct: 120 QVHVLQSYEKTPNNPYSPTYNPNWRNHPNFSWK 152


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 471 FQRPYNNPFSNTYNPGWRNHPNFSW 397
           FQRP N+PFS TYNPGWRNHPNF+W
Sbjct: 229 FQRPRNDPFSPTYNPGWRNHPNFAW 253


>gb|ABB55347.1| hypothetical protein 9.t00011 [Asparagus officinalis]
          Length = 149

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -3

Query: 471 FQRPYNNPFSNTYNPGWRNHPNFSW 397
           FQRP N+PFS TYNPGWRNHPNF+W
Sbjct: 109 FQRPRNDPFSPTYNPGWRNHPNFAW 133


>gb|ABG37653.1| integrase [Populus trichocarpa]
          Length = 619

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = -3

Query: 492 QVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           Q H + +FQRP +NP+S TYN GWRNH NFSW+
Sbjct: 19  QAHALNSFQRPNHNPYSQTYNLGWRNHLNFSWK 51


>gb|EPS63230.1| hypothetical protein M569_11557 [Genlisea aurea]
          Length = 607

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = -3

Query: 495 AQVHQVENFQRPYNNPFSNTYNPGWRNHPNFSWR 394
           A+V+      R  N+P+SNTYNPGWRNHPNFSWR
Sbjct: 209 AEVNAATGPSRYKNDPYSNTYNPGWRNHPNFSWR 242


Top