BLASTX nr result

ID: Atropa21_contig00038164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038164
         (565 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]    60   4e-07
gb|EOX92171.1| Gag-pol polyprotein-like protein [Theobroma cacao]      58   2e-06
gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]         57   2e-06

>emb|CAN64780.1| hypothetical protein VITISV_043231 [Vitis vinifera]
          Length = 898

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = +3

Query: 435 ESFFRTRCTSHGKVCSVIIDSESYMNVIFEEMITKLGLSTKP 560
           E+ F+T CTSHGKVC+VIIDS S  NV+ +EM+TKL L+ KP
Sbjct: 476 ETIFQTSCTSHGKVCNVIIDSGSCTNVVAKEMVTKLNLTIKP 517


>gb|EOX92171.1| Gag-pol polyprotein-like protein [Theobroma cacao]
          Length = 399

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +3

Query: 414 EEKLWQKESFFRTRCTSHGKVCSVIIDSESYMNVIFEEMITKLGLSTKPH 563
           +++ W + + F TRCTS GKVC+VIIDS SY NVI   M+ KL L T+ H
Sbjct: 343 KDESWFRHNIFYTRCTSQGKVCNVIIDSGSYENVIANYMVEKLKLPTEVH 392


>gb|EOX96724.1| Gag-pol polyprotein, putative [Theobroma cacao]
          Length = 794

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = +3

Query: 414 EEKLWQKESFFRTRCTSHGKVCSVIIDSESYMNVIFEEMITKLGLSTKPH 563
           E++ W + + F TRCTS GKVC+VIIDS S  NVI   M+ KL L T+ H
Sbjct: 369 EDESWLRHNIFHTRCTSQGKVCNVIIDSGSCENVIANYMVKKLKLQTEVH 418


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