BLASTX nr result

ID: Atropa21_contig00038040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038040
         (474 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360398.1| PREDICTED: uncharacterized protein LOC102602...    49   7e-11
ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243...    46   6e-08
dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606...    46   2e-07
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...    41   3e-07
ref|XP_004252416.1| PREDICTED: uncharacterized protein LOC101244...    44   3e-07
ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663...    42   8e-07
ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605...    47   2e-06
ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258...    47   2e-06
ref|XP_004234894.1| PREDICTED: uncharacterized protein LOC101250...    45   3e-06
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    46   6e-06
ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259...    44   8e-06

>ref|XP_006360398.1| PREDICTED: uncharacterized protein LOC102602440 [Solanum tuberosum]
          Length = 170

 Score = 48.5 bits (114), Expect(2) = 7e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQGI-HRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIW 197
           + C  A  IW K+ NW  I H     W++       ++ GN    +++K+  S  IY IW
Sbjct: 54  VHCDYAKQIWIKMDNWTTIQHCTISTWDQHLDWMIANSKGNSQGAQVFKIVYSETIYAIW 113

Query: 196 QKRNMRVF*KKKR 158
            +RN R+F K+ R
Sbjct: 114 MERNFRIFEKRDR 126



 Score = 43.9 bits (102), Expect(2) = 7e-11
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 474 GRLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           GRL T DRLIKW +   P CPLC  + E+ ++LF
Sbjct: 20  GRLLTTDRLIKWGMQIDPKCPLCCKHEETKEHLF 53


>ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243694 [Solanum
           lycopersicum]
          Length = 177

 Score = 45.8 bits (107), Expect(2) = 6e-08
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQGIH--RPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYI 200
           LQC  A  +W+++  W G +  RP   W +    +  +  G   K +++K  ++  +Y I
Sbjct: 75  LQCHYAEEVWERVLTWAGFYNNRPR-TWIQFMHWSIQNGKGKTTKAQLFKKIMAEGVYAI 133

Query: 199 WQKRNMRVF*KKK 161
           W +RN R+F  KK
Sbjct: 134 WNERNKRIFEDKK 146



 Score = 36.6 bits (83), Expect(2) = 6e-08
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           +LAT DRL KW +   PTC LC    ES  +LF
Sbjct: 42  KLATIDRLAKWGVVHDPTCVLCKGADESLDHLF 74


>dbj|BAD66732.1| orf147a [Beta vulgaris subsp. vulgaris] gi|54606753|dbj|BAD66776.1|
           orf147a [Beta vulgaris subsp. vulgaris]
          Length = 147

 Score = 45.8 bits (107), Expect(2) = 2e-07
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = -3

Query: 367 CPVANLIWQKLFNWQGIHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIWQKR 188
           C  +  IW  L  W GI R A +W  +      H   N     I++M +S  +Y+IW++R
Sbjct: 60  CEFSYEIWSSLLCWLGIQRTAGDW--QGVLQSAHCQSNSSASCIFRMCISIAVYFIWRER 117

Query: 187 NMRVF 173
           N R F
Sbjct: 118 NARKF 122



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLFF 370
           RLAT DRL K+ I C   C LC +  E+  +LFF
Sbjct: 25  RLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFF 58


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score = 40.8 bits (94), Expect(2) = 3e-07
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLFFNVL 361
           RLA+KDRLIK+ +N    C  C S+ ESH++LFF  +
Sbjct: 805 RLASKDRLIKFGLNVDANCAFC-SSMESHEHLFFGCI 840



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
 Frame = -3

Query: 367  CPVANLIWQKLFNW-QGIHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGC-----IY 206
            C     IW  + NW Q IH P+    + +  TR      KCKG+ ++  L  C     IY
Sbjct: 839  CIELKTIWTAVLNWLQIIHMPSTWSEELNWITR------KCKGKGWRAMLLKCAFTETIY 892

Query: 205  YIWQKRNMRVF*KKKRNR 152
            +IW  RN RVF     NR
Sbjct: 893  HIWAYRNHRVFGGNVNNR 910


>ref|XP_004252416.1| PREDICTED: uncharacterized protein LOC101244351 [Solanum
           lycopersicum]
          Length = 169

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQG--IHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYI 200
           +QC  A  +W +L NW G  I  P   W         H  G + K   +K  L+  IY +
Sbjct: 66  IQCSFARGLWGRLLNWTGKQIDVPM-TWEHFVQWCIIHGKGKRAKAMKFKTILAEGIYGL 124

Query: 199 WQKRNMRVF*KKKR 158
           W +RN RVF  K +
Sbjct: 125 WMERNSRVFEHKSK 138



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           RL T DRL KW +    TC LC++  E+ +++F
Sbjct: 33  RLVTVDRLAKWGVEVEKTCVLCENEEETAEHVF 65


>ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663778 [Glycine max]
          Length = 145

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -3

Query: 367 CPVANLIWQKLFNWQGIHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIWQKR 188
           C V   +W+++  W  +      WN++      H  G   K  I K+ ++  +Y IW+ R
Sbjct: 44  CSVLGDVWKQVLKWIQVKHHPQEWNEELKWIIRHGKGKGHKASILKLAVTETVYGIWKYR 103

Query: 187 NMRVF 173
           N ++F
Sbjct: 104 NAKIF 108



 Score = 36.2 bits (82), Expect(2) = 8e-07
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = -1

Query: 474 GRLATKDRLIKWDINCSPTCPLCDSNPESHQNLFF 370
           GRL TKDRL+++ +     C  C+  PESH +LFF
Sbjct: 9   GRLPTKDRLLRFGMLGDKICCFCE-GPESHDHLFF 42


>ref|XP_006357282.1| PREDICTED: uncharacterized protein LOC102605115 [Solanum tuberosum]
          Length = 201

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 370 QCPVANLIWQKLFNW-QGIHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIWQ 194
           +CP +  +W KL  W Q +  P  NW++        A G     +I+K+  +  +Y IW 
Sbjct: 100 RCPYSQQVWSKLLQWIQFVQAPYNNWSQYVLGIIDAAKGKTPTAQIFKLVYTEYVYAIWI 159

Query: 193 KRNMRVF*KKKR 158
           +RN R+F K  R
Sbjct: 160 ERNHRIFEKDSR 171



 Score = 29.6 bits (65), Expect(2) = 2e-06
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           RL T DRL KW ++    C LC  + ES  +++
Sbjct: 66  RLNTTDRLKKWGLDIELKCVLCRLHLESRDHMY 98


>ref|XP_004234905.1| PREDICTED: uncharacterized protein LOC101258732 [Solanum
           lycopersicum]
          Length = 177

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQGI--HRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYI 200
           LQC  A  +W+++  W G   +RP   W +    + ++  G   K +++K  ++  +Y I
Sbjct: 75  LQCHYAEEVWERVLTWAGFFNNRPR-TWIQFMHWSIHNGKGKTTKAQLFKTIMTEGVYAI 133

Query: 199 WQKRNMRVF*KKK 161
           W +RN R+F  KK
Sbjct: 134 WNERNKRIFEDKK 146



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           +LAT  R+ KW +   P C +C    ES  +LF
Sbjct: 42  KLATIHRIAKWGVAHDPICVMCKGADESLDHLF 74


>ref|XP_004234894.1| PREDICTED: uncharacterized protein LOC101250379 [Solanum
           lycopersicum]
          Length = 164

 Score = 45.1 bits (105), Expect(2) = 3e-06
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQGIH-RPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIW 197
           +QC  A  +W++L +W   H R    W++    +  H  G     +++K  L+  +Y +W
Sbjct: 92  IQCHYARKVWERLLDWIDNHSRCPMTWSQFMQWSIQHGKGKTKSAQLFKSILAEGVYGLW 151

Query: 196 QKRNMRVF 173
            +RN R+F
Sbjct: 152 NERNKRIF 159



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           +L T DRL KW +  +  C LC S  ES +++F
Sbjct: 59  KLPTIDRLAKWGMVLNKACVLCKSADESIEHIF 91


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 46.2 bits (108), Expect(2) = 6e-06
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -3

Query: 367 CPVANLIWQKLFNWQGIHRPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIWQKR 188
           C  A+ +W+ +  W  +     NW+      + H N N    + ++M LS  +Y IW++R
Sbjct: 95  CDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNGMHQAHRMVLSETLYVIWKER 154

Query: 187 NMRVF 173
           N R F
Sbjct: 155 NDRKF 159



 Score = 29.3 bits (64), Expect(2) = 6e-06
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 447 IKWDINCSPTCPLCDSNPESHQNLFFN 367
           + W   C   C LC    E+H +LFF+
Sbjct: 68  VTWYPKCDQVCVLCTKENETHSHLFFS 94


>ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259935 [Solanum
           lycopersicum]
          Length = 189

 Score = 43.9 bits (102), Expect(2) = 8e-06
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -3

Query: 373 LQCPVANLIWQKLFNWQGIH-RPACNWNKKHTQTRYHANGNKCKGEIYKMTLSGCIYYIW 197
           +QC  A  IW++L  W  +H     +W +       +  G   + +++K  L+  +Y +W
Sbjct: 92  IQCHYAEAIWERLLRWINVHSNMPKSWTEFIQWCVKNGKGKTVRAQVFKGVLAEGVYGLW 151

Query: 196 QKRNMRVF*KK 164
            +RN R+F +K
Sbjct: 152 SERNKRIFEEK 162



 Score = 31.2 bits (69), Expect(2) = 8e-06
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 471 RLATKDRLIKWDINCSPTCPLCDSNPESHQNLF 373
           +LAT DRL KW +     C +C    ES ++LF
Sbjct: 59  KLATVDRLTKWGMALHRDCVMCKRAEESMEHLF 91


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