BLASTX nr result
ID: Atropa21_contig00037960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037960
(659 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containi... 401 e-109
ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containi... 398 e-109
emb|CBI20034.3| unnamed protein product [Vitis vinifera] 342 4e-92
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi... 342 4e-92
emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] 342 6e-92
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi... 329 5e-88
gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protei... 327 2e-87
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,... 322 6e-86
gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis] 321 1e-85
ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, part... 321 1e-85
ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containi... 320 2e-85
ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citr... 319 4e-85
ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containi... 318 9e-85
ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutr... 317 3e-84
ref|NP_191806.1| pentatricopeptide repeat-containing protein [Ar... 315 8e-84
ref|XP_002878464.1| pentatricopeptide repeat-containing protein ... 315 8e-84
gb|ESW20009.1| hypothetical protein PHAVU_006G173400g [Phaseolus... 313 2e-83
gb|ESW20008.1| hypothetical protein PHAVU_006G173400g [Phaseolus... 313 2e-83
ref|NP_191813.1| pentatricopeptide repeat-containing protein [Ar... 313 3e-83
ref|NP_196986.1| pentatricopeptide repeat-containing protein [Ar... 313 3e-83
>ref|XP_006347731.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum tuberosum]
Length = 687
Score = 401 bits (1030), Expect = e-109
Identities = 200/219 (91%), Positives = 204/219 (93%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTME FLISM AIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ
Sbjct: 314 GLLTMEAFLISMKAFAAAKERKKAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 373
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LLFEKLEHRFTP+L TYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL
Sbjct: 374 LLFEKLEHRFTPNLLTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 433
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVA FE MLSSGCEADAA
Sbjct: 434 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAA 493
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
TFTCLVTGFGN++KMDKVF+LLREMKEKGCPPDARLYNA
Sbjct: 494 TFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNA 532
Score = 81.6 bits (200), Expect = 2e-13
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +L+ L + K +A LFE ++ + +P+ ++YT+L+ C+ + +A
Sbjct: 418 FKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAV 477
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ EM+ G + D ++ G KK L MK KG P+ R Y LI+ +
Sbjct: 478 AGFEEMLSSGCEADAATFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLI 537
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ D+AV ++ M+ +G + T+ L+ F + D + EM +GC PD
Sbjct: 538 INRRMPDDAVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDE 597
Query: 15 RLY 7
Y
Sbjct: 598 NSY 600
Score = 66.6 bits (161), Expect = 6e-09
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Frame = -3
Query: 576 FELMKKYKFKVGVETINCLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCR 400
FE M + T CL+ G + K+ K LL E E P + Y L+
Sbjct: 480 FEEMLSSGCEADAATFTCLVTGFGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLIIN 539
Query: 399 VKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRS 220
+ DA ++ +MI G +P I +N +++ K A +E M +G P+ S
Sbjct: 540 RRMPDDAVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENS 599
Query: 219 YTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMK 40
YT+ I L QG+ EA E M+ G +A + F + D + L + MK
Sbjct: 600 YTVFIGGLIGQGRSMEACKYLEEMIDKGMKAPQLDYNKFAADFSRGGRPDILEELAKRMK 659
Query: 39 EKG 31
G
Sbjct: 660 FSG 662
Score = 65.9 bits (159), Expect = 1e-08
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLL-DALGRAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNG 409
I +FE+MK + L+ D + K+ + E L T+T L+ G
Sbjct: 442 IKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAATFTCLVTG 501
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ K + + EM +KG PD +N +++ ++ + DA+ L++ M G P
Sbjct: 502 FGNKKKMDKVFALLREMKEKGCPPDARLYNALIKLIINRRMPDDAVTLYKKMIRNGIQPT 561
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
+Y +L++ D A A++E M GC D ++T + G Q + + L
Sbjct: 562 IHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIGGLIGQGRSMEACKYLE 621
Query: 48 EMKEKGCPPDARLYN 4
EM +KG YN
Sbjct: 622 EMIDKGMKAPQLDYN 636
>ref|XP_004230081.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Solanum lycopersicum]
Length = 691
Score = 398 bits (1022), Expect = e-109
Identities = 198/219 (90%), Positives = 203/219 (92%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTME FLISM AIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ
Sbjct: 318 GLLTMEAFLISMKAFAAAKERKKAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 377
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LLFEKLEHRFTP+LQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL
Sbjct: 378 LLFEKLEHRFTPNLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 437
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKKRSDAI LFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVA FE MLSSGCEADAA
Sbjct: 438 KCKKRSDAITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAA 497
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
TFTCLVTGFGN+++MDKVF+LL EMKEKGCPPDARLYNA
Sbjct: 498 TFTCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNA 536
Score = 77.8 bits (190), Expect = 3e-12
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +L+ L + K +A LFE ++ + +P+ ++YT+L+ C+ + +A
Sbjct: 422 FKPDIVAHNTMLEGLLKCKKRSDAITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAV 481
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ EM+ G + D ++ G K+ L MK KG P+ R Y LI+ L
Sbjct: 482 AGFEEMLSSGCEADAATFTCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNALIKLL 541
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ +AV ++ M+ +G + T+ L+ F + D + EM +GC PD
Sbjct: 542 INRRMPVDAVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDE 601
Query: 15 RLY 7
Y
Sbjct: 602 NSY 604
Score = 69.3 bits (168), Expect = 1e-09
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 1/183 (0%)
Frame = -3
Query: 576 FELMKKYKFKVGVETINCLLDALGRAK-LGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCR 400
FE M + T CL+ G K + K LL E E P + Y L+
Sbjct: 484 FEEMLSSGCEADAATFTCLVTGFGNKKRMDKVFALLTEMKEKGCPPDARLYNALIKLLIN 543
Query: 399 VKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRS 220
+ +DA ++ +MI G +P I +N +++ K A +E M +G P+ S
Sbjct: 544 RRMPVDAVTLYKKMIRNGIQPTIHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENS 603
Query: 219 YTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMK 40
YT+ I L QG+ EA E M+ G +A + F K D + L + MK
Sbjct: 604 YTVFIGGLIGQGRSMEACKYLEEMIDKGMKAPQLDYNKFAADFSRGGKPDILEELAKRMK 663
Query: 39 EKG 31
G
Sbjct: 664 FSG 666
Score = 65.9 bits (159), Expect = 1e-08
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLL-DALGRAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNG 409
I +FE+MK + L+ D + K+ + E L T+T L+ G
Sbjct: 446 ITLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVAGFEEMLSSGCEADAATFTCLVTG 505
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ K + + EM +KG PD +N +++ L+ + DA+ L++ M G P
Sbjct: 506 FGNKKRMDKVFALLTEMKEKGCPPDARLYNALIKLLINRRMPVDAVTLYKKMIRNGIQPT 565
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
+Y +L++ D A A++E M GC D ++T + G Q + + L
Sbjct: 566 IHTYNMLMKSFFMTKNYDMAHATWEEMSLRGCCPDENSYTVFIGGLIGQGRSMEACKYLE 625
Query: 48 EMKEKGCPPDARLYN 4
EM +KG YN
Sbjct: 626 EMIDKGMKAPQLDYN 640
>emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 342 bits (878), Expect = 4e-92
Identities = 163/219 (74%), Positives = 188/219 (85%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+FELMK+Y F GV+TINCLLD LGRAKLGKEAQ
Sbjct: 254 GLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQ 313
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKLE RFTP+L+TYTVLLNGWCR+KNL++AG+ WNEMIDKGFKPDI+AH+TMLEGLL
Sbjct: 314 ALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLL 373
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFEVMKAKGPSPN R+YTILIRDLCKQ KM EAV F+ M+ SGC+ DAA
Sbjct: 374 KCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAA 433
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGNQ+KMDKV++LL+EMKEKGCP D R YNA
Sbjct: 434 VYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNA 472
Score = 77.4 bits (189), Expect = 3e-12
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + + +L+ L + K +A LFE ++ + +P+++TYT+L+ C+ + +A
Sbjct: 358 FKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAV 417
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ ++EM+D G +PD + ++ G KK L + MK KG + R+Y LI+ +
Sbjct: 418 EYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLM 477
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ D+AV ++ M+ +G ++ T+ ++ + R + + EM EKG
Sbjct: 478 TNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCA---EMIEKGMKAPQ 534
Query: 15 RLYN 4
YN
Sbjct: 535 LDYN 538
>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 342 bits (878), Expect = 4e-92
Identities = 163/219 (74%), Positives = 188/219 (85%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+FELMK+Y F GV+TINCLLD LGRAKLGKEAQ
Sbjct: 299 GLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQ 358
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKLE RFTP+L+TYTVLLNGWCR+KNL++AG+ WNEMIDKGFKPDI+AH+TMLEGLL
Sbjct: 359 ALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLL 418
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFEVMKAKGPSPN R+YTILIRDLCKQ KM EAV F+ M+ SGC+ DAA
Sbjct: 419 KCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAA 478
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGNQ+KMDKV++LL+EMKEKGCP D R YNA
Sbjct: 479 VYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNA 517
Score = 88.6 bits (218), Expect = 2e-15
Identities = 49/183 (26%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + + +L+ L + K +A LFE ++ + +P+++TYT+L+ C+ + +A
Sbjct: 403 FKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAV 462
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ ++EM+D G +PD + ++ G KK L + MK KG + R+Y LI+ +
Sbjct: 463 EYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLM 522
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ D+AV ++ M+ +G ++ T+ ++ + R + ++ EM KGC PD
Sbjct: 523 TNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDD 582
Query: 15 RLY 7
Y
Sbjct: 583 NSY 585
>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 342 bits (877), Expect = 6e-92
Identities = 163/219 (74%), Positives = 188/219 (85%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+FELMK+Y F GV+TINCLLD LGRAKLGKEAQ
Sbjct: 299 GLLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQ 358
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKLE RFTP+L+TYTVLLNGWCR+KNL++AG+ WNEMIDKGFKPDI+AH+TMLEGLL
Sbjct: 359 ALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLL 418
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFEVMKAKGPSPN R+YTILIRDLCKQ KM EAV F+ M+ SGC+ DAA
Sbjct: 419 KCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAA 478
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGNQ+KMDKV++LL+EMKEKGCP D R YNA
Sbjct: 479 VYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNA 517
Score = 67.8 bits (164), Expect = 3e-09
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + + +L+ L + K +A LFE ++ + +P+++TYT+L+ C+ + +A
Sbjct: 403 FKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAV 462
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ ++EM+D G +PD + ++ G KK L + MK KG + R+Y LI+ +
Sbjct: 463 EYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLM 522
Query: 195 CKQGKMDEAVASFEGMLSSG-----------------------------------CEADA 121
+ D+AV ++ M+ +G C D
Sbjct: 523 TNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDD 582
Query: 120 ATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYN 4
++ + G + ++ L EM EKG YN
Sbjct: 583 NSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYN 621
>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 329 bits (843), Expect = 5e-88
Identities = 156/218 (71%), Positives = 180/218 (82%)
Frame = -3
Query: 654 LLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQL 475
LLTMETF + A+G+ ELMKKYK+KVGVETINCLLD+LGRAKLGKEA
Sbjct: 240 LLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALT 299
Query: 474 LFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLK 295
+FEKL RFTP+LQTYTVLLNGWCRV+NLM+AGK+WN+MID+ FKPDIVAHNTMLEGLL+
Sbjct: 300 IFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLR 359
Query: 294 CKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAAT 115
CKKRSDAIKLFEVMKAKGPSP+ +SYTIL+RD CKQ KM EAV FE M +GC DAA
Sbjct: 360 CKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAI 419
Query: 114 FTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGNQ++MD V+ LL+EMK GCPPD + YNA
Sbjct: 420 YTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNA 457
Score = 66.2 bits (160), Expect = 8e-09
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLL-DALGRAKLGKEAQLLFEKLEHR-FTPSLQTYTVLLN 412
I +FE+MK V++ L+ D +AK+ KEA FE+++ P YT L+
Sbjct: 367 IKLFEVMKAKGPSPDVKSYTILVRDFCKQAKM-KEAVQYFEEMQGAGCRPDAAIYTCLIT 425
Query: 411 GWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSP 232
G+ K + + EM G PD +N +++ + + DA+++++ M G P
Sbjct: 426 GFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKP 485
Query: 231 NTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLL 52
T +Y+++++ + + VA+++ M GC D ++T + G + + + L
Sbjct: 486 TTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYL 545
Query: 51 REMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 546 EEMIEKGMKAPQLDYN 561
Score = 63.9 bits (154), Expect = 4e-08
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Frame = -3
Query: 576 FELMKKYKFKVGVETINCLLDALGRAK-LGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCR 400
FE M+ + CL+ G K + LL E + P +TY L+
Sbjct: 405 FEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTN 464
Query: 399 VKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRS 220
+ DA +++ +MI+ G KP ++ M++ + + + ++ MK KG P+ S
Sbjct: 465 KRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNS 524
Query: 219 YTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMK 40
YT+ I L G+ EA E M+ G +A + F + D + L ++MK
Sbjct: 525 YTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMK 584
Query: 39 EKG 31
G
Sbjct: 585 FSG 587
>gb|EOY32024.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 627
Score = 327 bits (838), Expect = 2e-87
Identities = 152/219 (69%), Positives = 185/219 (84%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
G++TMETF+I++ AIG+FELMKKYK+K GV+TINCLLD+L R KL KEAQ
Sbjct: 247 GVVTMETFIIAIKAFAAAKERKKAIGIFELMKKYKYKAGVDTINCLLDSLVRVKLAKEAQ 306
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKL RFTP+L TYT+LLNGWCRV+NLM+AG+VWNEM+DKGFKPDIVAHN M+EGLL
Sbjct: 307 ALFEKLRDRFTPNLSTYTILLNGWCRVRNLMEAGRVWNEMLDKGFKPDIVAHNVMIEGLL 366
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ +KRSDA+KLFEVMKAKGP PN RSYTI+IR+LCKQ KM+EAV F+ +L SGC+ DAA
Sbjct: 367 RSRKRSDAVKLFEVMKAKGPLPNVRSYTIIIRELCKQAKMNEAVGYFDELLDSGCQPDAA 426
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGNQ++MD V+ LL+EM+EKGCPPD + YNA
Sbjct: 427 VYTCLITGFGNQKRMDVVYRLLKEMQEKGCPPDGQTYNA 465
Score = 86.7 bits (213), Expect = 6e-15
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +++ L R++ +A LFE ++ + P++++YT+++ C+ + +A
Sbjct: 351 FKPDIVAHNVMIEGLLRSRKRSDAVKLFEVMKAKGPLPNVRSYTIIIRELCKQAKMNEAV 410
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
++E++D G +PD + ++ G K+ +L + M+ KG P+ ++Y LI+ L
Sbjct: 411 GYFDELLDSGCQPDAAVYTCLITGFGNQKRMDVVYRLLKEMQEKGCPPDGQTYNALIKLL 470
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+Q ++A+ ++ M+ SG + TF ++ F R D ++ EM EKG PD
Sbjct: 471 TRQRMPEDAMRVYKKMIQSGIQPTIHTFNMIMKSFFQTRNYDMGRAIWDEMNEKGFCPDD 530
Query: 15 RLY 7
Y
Sbjct: 531 NAY 533
Score = 63.2 bits (152), Expect = 7e-08
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = -3
Query: 537 ETINCLLDALGRAKLGKEAQLLFEKL-EHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNE 361
+T N L+ L R ++ ++A +++K+ + P++ T+ +++ + + +N +W+E
Sbjct: 461 QTYNALIKLLTRQRMPEDAMRVYKKMIQSGIQPTIHTFNMIMKSFFQTRNYDMGRAIWDE 520
Query: 360 MIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGK 181
M +KGF PD A+ + GL+ + +A K E M KG Y D + GK
Sbjct: 521 MNEKGFCPDDNAYAVFIGGLISLGRSGEACKFLEEMMEKGMKAPHLDYNKFGADFSRAGK 580
Query: 180 MDEAVASFEGMLSSGCEADAATFT 109
D+ + M SG A FT
Sbjct: 581 PDKLEDLAQKMKFSGKFEAANVFT 604
Score = 58.9 bits (141), Expect = 1e-06
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGR-AKLGKEAQLLFEKLEHRFTPSLQTYTVLLNG 409
+ +FE+MK V + ++ L + AK+ + E L+ P YT L+ G
Sbjct: 375 VKLFEVMKAKGPLPNVRSYTIIIRELCKQAKMNEAVGYFDELLDSGCQPDAAVYTCLITG 434
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ K + ++ EM +KG PD +N +++ L + + DA+++++ M G P
Sbjct: 435 FGNQKRMDVVYRLLKEMQEKGCPPDGQTYNALIKLLTRQRMPEDAMRVYKKMIQSGIQPT 494
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
++ ++++ + D A ++ M G D + + G + + + L
Sbjct: 495 IHTFNMIMKSFFQTRNYDMGRAIWDEMNEKGFCPDDNAYAVFIGGLISLGRSGEACKFLE 554
Query: 48 EMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 555 EMMEKGMKAPHLDYN 569
>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 322 bits (825), Expect = 6e-86
Identities = 156/219 (71%), Positives = 183/219 (83%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
G+LTM+TF I+M A+ MFELMKKY +KVGVETIN LLD+LGRAKLGKEAQ
Sbjct: 159 GVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQ 218
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFE L+ RFTP+L+TYTVLLNGWC+VKNLM+AG VWNEMIDKGFKPDIVAHN MLEGLL
Sbjct: 219 ALFENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLL 278
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ K+RSDAIKLF VMKAKGPSP+ RSYTILIR LC+Q KM+EAV F+ M+ SGC+ DAA
Sbjct: 279 RSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAA 338
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGN+++MD V+ LL+EMKE+GCPPD YNA
Sbjct: 339 VYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNA 377
Score = 80.9 bits (198), Expect = 3e-13
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +L+ L R+K +A LF ++ + +P +++YT+L+ CR + +A
Sbjct: 263 FKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAV 322
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ + EMID G KPD + ++ G K+ L + MK +G P+ +Y LI+ +
Sbjct: 323 EYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLM 382
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ D+A ++ M SG E T+ ++ + R + ++ EM KG PD
Sbjct: 383 TRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDD 442
Query: 15 RLY 7
Y
Sbjct: 443 NSY 445
Score = 65.1 bits (157), Expect = 2e-08
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G R ++ LL E E P TY L+ R+K DA +++ +M
Sbjct: 342 CLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQS 401
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
G +P I +N +++ + + +++ M KG P+ SYT+LI L QG+ EA
Sbjct: 402 GIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEA 461
Query: 168 VASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKG 31
E ML G +A + D + L + +K G
Sbjct: 462 CKYLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILEELAQRLKFSG 507
Score = 63.2 bits (152), Expect = 7e-08
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLF-EKLEHRFTPSLQTYTVLLNG 409
I +F +MK V + L+ L R +EA F E ++ P YT L+ G
Sbjct: 287 IKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITG 346
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ K + + EM ++G PD + +N +++ + + K DA ++++ M G P
Sbjct: 347 FGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPT 406
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
+Y ++++ + + A ++ M G D ++T L+ G +Q + + L
Sbjct: 407 IHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLE 466
Query: 48 EMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 467 EMLEKGMKAPQLDYN 481
>gb|EXB53232.1| hypothetical protein L484_007175 [Morus notabilis]
Length = 567
Score = 321 bits (823), Expect = 1e-85
Identities = 158/219 (72%), Positives = 179/219 (81%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
G LTMETF+I++ A+GMFELMKKYKFKVGV+T N LLD LG+A+LGKEAQ
Sbjct: 187 GELTMETFMIAIKAFADAKERKKAVGMFELMKKYKFKVGVDTFNFLLDTLGKARLGKEAQ 246
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LFEKL+ FTP+LQTYTVLLNGWCRVKNLM+AG++WNEMID GFKPD+VAH MLEGLL
Sbjct: 247 VLFEKLKGGFTPNLQTYTVLLNGWCRVKNLMEAGRLWNEMIDAGFKPDVVAHTIMLEGLL 306
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ KKRSDAIKLFEVMKAKGP PN R YT+LIRD CKQGKM EAV F +L SG + DAA
Sbjct: 307 RSKKRSDAIKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKEAVECFNDLLESGNQPDAA 366
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCLVTGFGNQR MD VF +L+EMKEKG PD RLYNA
Sbjct: 367 VYTCLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNA 405
Score = 83.6 bits (205), Expect = 5e-14
Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKNLMDAG 376
FK V +L+ L R+K +A LFE ++ + P+++ YTVL+ +C+ + +A
Sbjct: 291 FKPDVVAHTIMLEGLLRSKKRSDAIKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKEAV 350
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ +N++++ G +PD + ++ G + ++ + MK KG +P+ R Y LI+ +
Sbjct: 351 ECFNDLLESGNQPDAAVYTCLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIKLM 410
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
+ D+A ++ M+ SG + T+ ++ + +R + + EM +KGC PD
Sbjct: 411 TSRKMPDDAARIYKRMIQSGIKPTIHTYNMMMKSYFQRRNFEMGCVVWDEMIQKGCCPDD 470
Query: 15 RLY 7
Y
Sbjct: 471 NSY 473
Score = 67.0 bits (162), Expect = 5e-09
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLL-DALGRAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNG 409
I +FE+MK + + L+ D + K+ + + + LE P YT L+ G
Sbjct: 315 IKLFEVMKAKGPRPNIRCYTVLIRDFCKQGKMKEAVECFNDLLESGNQPDAAVYTCLVTG 374
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ +N+ +V EM +KG PD +N +++ + K DA ++++ M G P
Sbjct: 375 FGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIKLMTSRKMPDDAARIYKRMIQSGIKPT 434
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
+Y ++++ ++ + ++ M+ GC D ++T + Q + + +
Sbjct: 435 IHTYNMMMKSYFQRRNFEMGCVVWDEMIQKGCCPDDNSYTVFIGALIRQGRSGEACKYIE 494
Query: 48 EMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 495 EMIEKGMKAPQLDYN 509
Score = 65.9 bits (159), Expect = 1e-08
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Frame = -3
Query: 525 CLLDALGRAK-LGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + + ++L E E TP + Y L+ K DA +++ MI
Sbjct: 370 CLVTGFGNQRNMDMVFEVLKEMKEKGHTPDGRLYNALIKLMTSRKMPDDAARIYKRMIQS 429
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
G KP I +N M++ + + +++ M KG P+ SYT+ I L +QG+ EA
Sbjct: 430 GIKPTIHTYNMMMKSYFQRRNFEMGCVVWDEMIQKGCCPDDNSYTVFIGALIRQGRSGEA 489
Query: 168 VASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKG 31
E M+ G +A + F K + + L ++MK G
Sbjct: 490 CKYIEEMIEKGMKAPQLDYNKFAADFSRAGKPNILEELAQKMKFAG 535
>ref|XP_002320305.2| hypothetical protein POPTR_0014s11650g, partial [Populus
trichocarpa] gi|550324008|gb|EEE98620.2| hypothetical
protein POPTR_0014s11650g, partial [Populus trichocarpa]
Length = 614
Score = 321 bits (823), Expect = 1e-85
Identities = 154/218 (70%), Positives = 181/218 (83%)
Frame = -3
Query: 654 LLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQL 475
LLT++TF I+M A+G+FELMK +K++VGVETIN LLD+LGRAKLGKEAQ
Sbjct: 243 LLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQA 302
Query: 474 LFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLK 295
LF KLE RFTP+L+TYTVLLNGWCRVKNLM+AG++WNEM+D+GFKPDIV HN MLEGLL+
Sbjct: 303 LFGKLEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLR 362
Query: 294 CKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAAT 115
KKRSDAIK FEVMKAKGPSP+ RSYTILIRDLCKQ KM EAV F M+ SGC DAA
Sbjct: 363 SKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAV 422
Query: 114 FTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TG+GN ++MD V+ LL+EMKEKGCPPD + YNA
Sbjct: 423 YTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNA 460
Score = 85.1 bits (209), Expect = 2e-14
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + T N +L+ L R+K +A FE ++ + +P +++YT+L+ C+ + +A
Sbjct: 346 FKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAV 405
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ EM+D G PD + ++ G K+ +L + MK KG P+ ++Y LI+ +
Sbjct: 406 GYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLM 465
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
Q D+AV ++ M+ +G E ++ ++ + R + ++ EM +KG PD
Sbjct: 466 TSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDD 525
Query: 15 RLY 7
Y
Sbjct: 526 NSY 528
Score = 68.6 bits (166), Expect = 2e-09
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Frame = -3
Query: 525 CLLDALGRAK-LGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G K + +LL E E P +TY L+ + DA +++ +MI
Sbjct: 425 CLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQN 484
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
G +P I ++N +++ + + +++ M KG P+ SYT+ I L QG+ +EA
Sbjct: 485 GIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEA 544
Query: 168 VASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKG 31
E M+ G +A + F K D + L ++MK G
Sbjct: 545 CKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMKFSG 590
Score = 65.5 bits (158), Expect = 1e-08
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLL-DALGRAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNG 409
I FE+MK V + L+ D + K+ + +E ++ P YT L+ G
Sbjct: 370 IKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTG 429
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ K + ++ EM +KG PD +N +++ + + DA+++++ M G P+
Sbjct: 430 YGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPS 489
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
SY ++++ + + A ++ M G D ++T + G +Q + ++ L
Sbjct: 490 IHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLE 549
Query: 48 EMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 550 EMIEKGMKAPQLDYN 564
>ref|XP_006595405.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14820,
mitochondrial-like [Glycine max]
Length = 593
Score = 320 bits (820), Expect = 2e-85
Identities = 150/219 (68%), Positives = 182/219 (83%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+F+LMKKY FKVGV+ IN LLD+L AKLGKEAQ
Sbjct: 213 GLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQ 272
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+FEKL+ RFTPSLQTYT+LL+GWCR+KNL++AG+VWNEMID+GF PD+VAHN MLEGLL
Sbjct: 273 AVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLL 332
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFE+MKAKGPSPN RSYTI+I+D CKQ M EA+ F+ M+ GC+ DAA
Sbjct: 333 KCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAA 392
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+KMD V+SLL+EM+E+GCPPD R YNA
Sbjct: 393 LYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNA 431
Score = 60.8 bits (146), Expect = 3e-07
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHR-FTPSLQTYTVLLNG 409
I +FE+MK V + ++ + KL EA F+ + R P YT L+ G
Sbjct: 341 IKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITG 400
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ R K + + EM ++G PD +N +++ + DA+++++ M G P
Sbjct: 401 FGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPT 460
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
+Y ++++ + ++ M GC D ++ + G Q + + L
Sbjct: 461 IHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLE 520
Query: 48 EMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 521 EMLEKGMKAPKLDYN 535
>ref|XP_006444484.1| hypothetical protein CICLE_v10019225mg [Citrus clementina]
gi|557546746|gb|ESR57724.1| hypothetical protein
CICLE_v10019225mg [Citrus clementina]
Length = 653
Score = 319 bits (818), Expect = 4e-85
Identities = 155/219 (70%), Positives = 178/219 (81%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLL+METF I+M A+ +FELM KYKFK GV+TINCLL+ LGR+KL KEAQ
Sbjct: 277 GLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQ 336
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LLF+KL+HRFTP+L TYTVLL GWCRVKNLM+AG+VWNEMIDKGFKPD+VAHN MLEGLL
Sbjct: 337 LLFDKLKHRFTPNLTTYTVLLGGWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 396
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
K KRSDAIKLFEVMKAKGPSPN RSYTI+I CKQ KM EAV F+ ML GC+ DAA
Sbjct: 397 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQPDAA 456
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGN+R+MD V+ LL+EM+E GCPPD YNA
Sbjct: 457 VYTCLITGFGNRRRMDIVYDLLKEMEEMGCPPDGLTYNA 495
Score = 68.9 bits (167), Expect = 1e-09
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLF-EKLEHRFTPSLQTYTVLLNG 409
I +FE+MK V + ++ + KEA F E L+ P YT L+ G
Sbjct: 405 IKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQPDAAVYTCLITG 464
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSD-AIKLFEVMKAKGPSP 232
+ + + + EM + G PD + +N +++ L+K +K D A+++++ M G P
Sbjct: 465 FGNRRRMDIVYDLLKEMEEMGCPPDGLTYNALIK-LMKIQKMPDEAVRIYKEMVRSGFKP 523
Query: 231 NTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLL 52
+Y ++++ + G + ++ M+ GC D ++T L+ G +Q + + + L
Sbjct: 524 TIHTYNMIMKSYFQTGNYEMGCKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYL 583
Query: 51 REMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 584 EEMLEKGMKAPVLDYN 599
Score = 62.0 bits (149), Expect = 2e-07
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Frame = -3
Query: 576 FELMKKYKFKVGVETINCLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCR 400
F+ M K+ + CL+ G R ++ LL E E P TY L+
Sbjct: 443 FDEMLKFGCQPDAAVYTCLITGFGNRRRMDIVYDLLKEMEEMGCPPDGLTYNALIKLMKI 502
Query: 399 VKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRS 220
K +A +++ EM+ GFKP I +N +++ + K+++ M +G P+ S
Sbjct: 503 QKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGCKVWDEMIRRGCCPDDNS 562
Query: 219 YTILIRDLCKQGKMDEAVASFEGMLSSGCEA---DAATFTCLVTGFGNQRKMDKVFSLLR 49
YT+LI L Q + EA E ML G +A D F ++ G +D++ +R
Sbjct: 563 YTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMR 622
>ref|XP_006492325.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Citrus sinensis]
Length = 651
Score = 318 bits (815), Expect = 9e-85
Identities = 154/219 (70%), Positives = 178/219 (81%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLL+METF I+M A+ +FELM KYKFK GV+TINCLL+ LGR+KL KEAQ
Sbjct: 275 GLLSMETFKIAMNAFAAAKERKKAVAIFELMNKYKFKAGVDTINCLLENLGRSKLPKEAQ 334
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LLF+KL+HRFTP+L TYTVLL WCRVKNLM+AG+VWNEMIDKGFKPD+VAHN MLEGLL
Sbjct: 335 LLFDKLKHRFTPNLTTYTVLLGSWCRVKNLMEAGRVWNEMIDKGFKPDVVAHNIMLEGLL 394
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
K KRSDAIKLFEVMKAKGPSPN RSYTI+I CKQ KM EAV F+ ML GC+ DAA
Sbjct: 395 KIGKRSDAIKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQPDAA 454
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFGN+R+MD V+ LL+EM+E+GCPPD YNA
Sbjct: 455 VYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNA 493
Score = 69.3 bits (168), Expect = 1e-09
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLF-EKLEHRFTPSLQTYTVLLNG 409
I +FE+MK V + ++ + KEA F E L+ P YT L+ G
Sbjct: 403 IKLFEVMKAKGPSPNVRSYTIMIWKFCKQSKMKEAVEYFDEMLKFGCQPDAAVYTCLITG 462
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSD-AIKLFEVMKAKGPSP 232
+ + + + EM ++G PD + +N +++ L+K +K D A+++++ M G P
Sbjct: 463 FGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIK-LMKIQKMPDEAVRIYKEMVRSGFKP 521
Query: 231 NTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLL 52
+Y ++++ + G + ++ M+ GC D ++T L+ G +Q + + + L
Sbjct: 522 TIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNSYTVLIGGLISQDRSGEAYKYL 581
Query: 51 REMKEKGCPPDARLYN 4
EM EKG YN
Sbjct: 582 EEMLEKGMKAPVLDYN 597
Score = 62.0 bits (149), Expect = 2e-07
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
Frame = -3
Query: 576 FELMKKYKFKVGVETINCLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCR 400
F+ M K+ + CL+ G R ++ LL E E P TY L+
Sbjct: 441 FDEMLKFGCQPDAAVYTCLITGFGNRRRMDIVYDLLKEMEERGCPPDGLTYNALIKLMKI 500
Query: 399 VKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRS 220
K +A +++ EM+ GFKP I +N +++ + K+++ M +G P+ S
Sbjct: 501 QKMPDEAVRIYKEMVRSGFKPTIHTYNMIMKSYFQTGNYEMGRKVWDEMIRRGCCPDDNS 560
Query: 219 YTILIRDLCKQGKMDEAVASFEGMLSSGCEA---DAATFTCLVTGFGNQRKMDKVFSLLR 49
YT+LI L Q + EA E ML G +A D F ++ G +D++ +R
Sbjct: 561 YTVLIGGLISQDRSGEAYKYLEEMLEKGMKAPVLDYNKFAADLSRAGRSYVLDELAQKMR 620
>ref|XP_006402372.1| hypothetical protein EUTSA_v10005842mg [Eutrema salsugineum]
gi|557103471|gb|ESQ43825.1| hypothetical protein
EUTSA_v10005842mg [Eutrema salsugineum]
Length = 611
Score = 317 bits (811), Expect = 3e-84
Identities = 148/219 (67%), Positives = 180/219 (82%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTM+TF I+M A+G+FELMKKYKFK+GVETINCLLD+LGRAKLGKEAQ
Sbjct: 237 GLLTMDTFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 296
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LF+KL+ RFTP+L TYTVLLNGWCRVKNLM+A ++WN MID+G KPDIVAHN MLEGLL
Sbjct: 297 VLFDKLKERFTPNLMTYTVLLNGWCRVKNLMEAARIWNHMIDQGLKPDIVAHNVMLEGLL 356
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ +K+SDAIKLF VMK+KGP PN RSYTI+IRD CKQ M+ A+ F+ M+ SG + DAA
Sbjct: 357 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 416
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+K+D V+ LL+EM+EKG PPD + YNA
Sbjct: 417 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 455
Score = 77.0 bits (188), Expect = 5e-12
Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = -3
Query: 528 NCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKNLMDAGKVWNEMID 352
N +L+ L R++ +A LF ++ + P++++YT+++ +C+ ++ A + +++M+D
Sbjct: 349 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 408
Query: 351 KGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDE 172
G +PD + ++ G KK +L + M+ KG P+ ++Y LI+ + + +
Sbjct: 409 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMASRKMPEH 468
Query: 171 AVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLY 7
A + M+ +G E TF ++ + R + + EM +KG PD Y
Sbjct: 469 ATRIYNKMIQNGIEPSIHTFNMIMKSYFMARNYEMGRAAWDEMVKKGICPDDNSY 523
Score = 62.4 bits (150), Expect = 1e-07
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + KL +LL E E P +TY L+ K A +++N+MI
Sbjct: 420 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMASRKMPEHATRIYNKMIQN 479
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
G +P I N +++ + ++ M KG P+ SYT+LIR L +GK EA
Sbjct: 480 GIEPSIHTFNMIMKSYFMARNYEMGRAAWDEMVKKGICPDDNSYTVLIRGLIGEGKSREA 539
Query: 168 VASFEGMLSSGCEADAATFTCLVTGF 91
E ML G + + F
Sbjct: 540 CRYLEEMLDRGMKTPLIDYNKFAADF 565
>ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis
thaliana] gi|34365579|gb|AAQ65101.1| At3g62470
[Arabidopsis thaliana] gi|332646835|gb|AEE80356.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 599
Score = 315 bits (807), Expect = 8e-84
Identities = 146/219 (66%), Positives = 181/219 (82%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I+M A+G+FELMKKYKFK+GVETINCLLD+LGRAKLGKEAQ
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LF+KL+ RFTP++ TYTVLLNGWCRV+NL++A ++WN+MID+G KPDIVAHN MLEGLL
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLL 344
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ +K+SDAIKLF VMK+KGP PN RSYTI+IRD CKQ M+ A+ F+ M+ SG + DAA
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+K+D V+ LL+EM+EKG PPD + YNA
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Score = 76.6 bits (187), Expect = 6e-12
Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = -3
Query: 528 NCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKNLMDAGKVWNEMID 352
N +L+ L R++ +A LF ++ + P++++YT+++ +C+ ++ A + +++M+D
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 351 KGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDE 172
G +PD + ++ G KK +L + M+ KG P+ ++Y LI+ + Q +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 171 AVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLY 7
A + M+ + E TF ++ + R + ++ EM +KG PD Y
Sbjct: 457 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
Score = 62.0 bits (149), Expect = 2e-07
Identities = 42/146 (28%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + KL +LL E E P +TY L+ K A +++N+MI
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
+P I N +++ + ++E M KG P+ SYT+LIR L +GK EA
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 168 VASFEGMLSSGCEADAATFTCLVTGF 91
E ML G + + F
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKFAADF 553
>ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324302|gb|EFH54723.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 628
Score = 315 bits (807), Expect = 8e-84
Identities = 146/219 (66%), Positives = 181/219 (82%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I+M A+G+FELMKKYKFK+GVETINCLLD+LGRAKLGKEAQ
Sbjct: 234 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 293
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LF+KL+ RFTP++ TYTVLLNGWCRV+NL++A ++WN+MID+G KPDIVAHN MLEGLL
Sbjct: 294 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLL 353
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ +K+SDAIKLF VMK+KGP PN RSYTI+IRD CKQ M+ A+ F+ M+ SG + DAA
Sbjct: 354 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 413
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+K+D V+ LL+EM+EKG PPD + YNA
Sbjct: 414 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 452
Score = 76.3 bits (186), Expect = 8e-12
Identities = 42/175 (24%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = -3
Query: 528 NCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKNLMDAGKVWNEMID 352
N +L+ L R++ +A LF ++ + P++++YT+++ +C+ ++ A + +++M+D
Sbjct: 346 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 405
Query: 351 KGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDE 172
G +PD + ++ G KK +L + M+ KG P+ ++Y LI+ + Q +
Sbjct: 406 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 465
Query: 171 AVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLY 7
A + M+ + E TF ++ + R + ++ EM +KG PD Y
Sbjct: 466 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSY 520
Score = 61.2 bits (147), Expect = 3e-07
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + KL +LL E E P +TY L+ K A +++N+MI
Sbjct: 417 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 476
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
+P I N +++ + +++ M KG P+ SYT+LIR L +GK EA
Sbjct: 477 EIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREA 536
Query: 168 VASFEGMLSSGCEADAATFTCLVTGF 91
E ML G + + F
Sbjct: 537 CRYLEEMLDKGMKTPLIDYNKFAADF 562
Score = 58.2 bits (139), Expect = 2e-06
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = -3
Query: 579 MFELMKKYKFK---VGVETINCLLDALGRAKLGKEAQLLFEKL-EHRFTPSLQTYTVLLN 412
++EL+K+ + K +T N L+ + K+ + A ++ K+ ++ PS+ T+ +++
Sbjct: 431 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 490
Query: 411 GWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSP 232
+ +N VW+EMI KG PD ++ ++ GL+ K +A + E M KG
Sbjct: 491 SYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 550
Query: 231 NTRSYTILIRDLCKQGK 181
Y D K G+
Sbjct: 551 PLIDYNKFAADFHKGGQ 567
>gb|ESW20009.1| hypothetical protein PHAVU_006G173400g [Phaseolus vulgaris]
Length = 638
Score = 313 bits (803), Expect = 2e-83
Identities = 147/219 (67%), Positives = 180/219 (82%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+F+LMKK++FKVGV+ IN LL++LG AKLGKEA+
Sbjct: 258 GLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKHRFKVGVDMINFLLESLGAAKLGKEAE 317
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKL RFTP+LQTYT+LL+GWCR+KNL++AGKVWNEMID GFKPDIVAHN MLEGLL
Sbjct: 318 ALFEKLRDRFTPNLQTYTILLSGWCRLKNLLEAGKVWNEMIDGGFKPDIVAHNVMLEGLL 377
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFE+MKAKGPSPN RSYTI+I+D CKQ EA+ F+ M+ GC+ D A
Sbjct: 378 KCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVA 437
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+KMD V++LL+EM+E+GC PD R YNA
Sbjct: 438 LYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNA 476
Score = 92.4 bits (228), Expect = 1e-16
Identities = 49/183 (26%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +L+ L + K +A LFE ++ + +P++++YT+++ +C+ K +A
Sbjct: 362 FKPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAI 421
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ +++M+D+G +PD+ + ++ G + KK L + M+ +G SP+ R+Y LI+ +
Sbjct: 422 EYFDDMVDRGCQPDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLM 481
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
Q D+AV ++ M+ SG E ++ ++ + + + + EM +KGC PD
Sbjct: 482 TSQHMPDDAVRIYKKMIQSGIEPTIHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDD 541
Query: 15 RLY 7
Y
Sbjct: 542 NSY 544
Score = 62.0 bits (149), Expect = 2e-07
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHR-FTPSLQTYTVLLNG 409
I +FE+MK V + ++ + K+ EA F+ + R P + YT L+ G
Sbjct: 386 IKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVALYTCLITG 445
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ R K + + EM ++G PD +N +++ + DA+++++ M G P
Sbjct: 446 FGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIEPT 505
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
SY ++++ + ++ M GC D ++ + G Q + L
Sbjct: 506 IHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDDNSYAVFIGGLIRQDRSGDACRYLE 565
Query: 48 EMKEKGCPPDARLYN 4
EM KG YN
Sbjct: 566 EMLGKGMKAPQLDYN 580
>gb|ESW20008.1| hypothetical protein PHAVU_006G173400g [Phaseolus vulgaris]
Length = 458
Score = 313 bits (803), Expect = 2e-83
Identities = 147/219 (67%), Positives = 180/219 (82%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I++ A+G+F+LMKK++FKVGV+ IN LL++LG AKLGKEA+
Sbjct: 78 GLLTMETFSIAIKAFAEAKQRKKAVGIFDLMKKHRFKVGVDMINFLLESLGAAKLGKEAE 137
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
LFEKL RFTP+LQTYT+LL+GWCR+KNL++AGKVWNEMID GFKPDIVAHN MLEGLL
Sbjct: 138 ALFEKLRDRFTPNLQTYTILLSGWCRLKNLLEAGKVWNEMIDGGFKPDIVAHNVMLEGLL 197
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
KCKK+SDAIKLFE+MKAKGPSPN RSYTI+I+D CKQ EA+ F+ M+ GC+ D A
Sbjct: 198 KCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVA 257
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+KMD V++LL+EM+E+GC PD R YNA
Sbjct: 258 LYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNA 296
Score = 92.4 bits (228), Expect = 1e-16
Identities = 49/183 (26%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Frame = -3
Query: 552 FKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRF-TPSLQTYTVLLNGWCRVKNLMDAG 376
FK + N +L+ L + K +A LFE ++ + +P++++YT+++ +C+ K +A
Sbjct: 182 FKPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAI 241
Query: 375 KVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDL 196
+ +++M+D+G +PD+ + ++ G + KK L + M+ +G SP+ R+Y LI+ +
Sbjct: 242 EYFDDMVDRGCQPDVALYTCLITGFGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLM 301
Query: 195 CKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDA 16
Q D+AV ++ M+ SG E ++ ++ + + + + EM +KGC PD
Sbjct: 302 TSQHMPDDAVRIYKKMIQSGIEPTIHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDD 361
Query: 15 RLY 7
Y
Sbjct: 362 NSY 364
Score = 62.0 bits (149), Expect = 2e-07
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 1/195 (0%)
Frame = -3
Query: 585 IGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHR-FTPSLQTYTVLLNG 409
I +FE+MK V + ++ + K+ EA F+ + R P + YT L+ G
Sbjct: 206 IKLFEIMKAKGPSPNVRSYTIIIQDFCKQKMTGEAIEYFDDMVDRGCQPDVALYTCLITG 265
Query: 408 WCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPN 229
+ R K + + EM ++G PD +N +++ + DA+++++ M G P
Sbjct: 266 FGRQKKMDTVYNLLKEMRERGCSPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIEPT 325
Query: 228 TRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLR 49
SY ++++ + ++ M GC D ++ + G Q + L
Sbjct: 326 IHSYNMIMKSYFMTKNYEMGQVIWDEMHQKGCCPDDNSYAVFIGGLIRQDRSGDACRYLE 385
Query: 48 EMKEKGCPPDARLYN 4
EM KG YN
Sbjct: 386 EMLGKGMKAPQLDYN 400
>ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 313 bits (802), Expect = 3e-83
Identities = 146/219 (66%), Positives = 179/219 (81%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I+M A+G+FELMKKYKFK+GVETINCLLD+LGRAKLGKEAQ
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LF+KL+ RFTP++ TYTVLLNGWCRV+NL++A ++WN+MID G KPDIVAHN MLEGLL
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ K+SDAIKLF VMK+KGP PN RSYTI+IRD CKQ M+ A+ F+ M+ SG + DAA
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+K+D V+ LL+EM+EKG PPD + YNA
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Score = 73.2 bits (178), Expect = 7e-11
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Frame = -3
Query: 567 MKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKN 391
M + K + N +L+ L R+ +A LF ++ + P++++YT+++ +C+ +
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 390 LMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTI 211
+ A + +++M+D G +PD + ++ G KK +L + M+ KG P+ ++Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 210 LIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKG 31
LI+ + Q + + M+ + E TF ++ + R + ++ EM +KG
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 30 CPPDARLY 7
PD Y
Sbjct: 504 ICPDDNSY 511
Score = 59.7 bits (143), Expect = 8e-07
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + KL +LL E E P +TY L+ K +++N+MI
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
+P I N +++ + +++ M KG P+ SYT+LIR L +GK EA
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 168 VASFEGMLSSGCEADAATFTCLVTGF 91
E ML G + + F
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKFAADF 553
>ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis
thaliana] gi|332004697|gb|AED92080.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 313 bits (802), Expect = 3e-83
Identities = 146/219 (66%), Positives = 179/219 (81%)
Frame = -3
Query: 657 GLLTMETFLISMXXXXXXXXXXXAIGMFELMKKYKFKVGVETINCLLDALGRAKLGKEAQ 478
GLLTMETF I+M A+G+FELMKKYKFK+GVETINCLLD+LGRAKLGKEAQ
Sbjct: 224 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 477 LLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDKGFKPDIVAHNTMLEGLL 298
+LF+KL+ RFTP++ TYTVLLNGWCRV+NL++A ++WN+MID G KPDIVAHN MLEGLL
Sbjct: 284 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 297 KCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEAVASFEGMLSSGCEADAA 118
+ K+SDAIKLF VMK+KGP PN RSYTI+IRD CKQ M+ A+ F+ M+ SG + DAA
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 403
Query: 117 TFTCLVTGFGNQRKMDKVFSLLREMKEKGCPPDARLYNA 1
+TCL+TGFG Q+K+D V+ LL+EM+EKG PPD + YNA
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Score = 73.2 bits (178), Expect = 7e-11
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Frame = -3
Query: 567 MKKYKFKVGVETINCLLDALGRAKLGKEAQLLFEKLEHRFT-PSLQTYTVLLNGWCRVKN 391
M + K + N +L+ L R+ +A LF ++ + P++++YT+++ +C+ +
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 390 LMDAGKVWNEMIDKGFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTI 211
+ A + +++M+D G +PD + ++ G KK +L + M+ KG P+ ++Y
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 210 LIRDLCKQGKMDEAVASFEGMLSSGCEADAATFTCLVTGFGNQRKMDKVFSLLREMKEKG 31
LI+ + Q + + M+ + E TF ++ + R + ++ EM +KG
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 30 CPPDARLY 7
PD Y
Sbjct: 503 ICPDDNSY 510
Score = 59.7 bits (143), Expect = 8e-07
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Frame = -3
Query: 525 CLLDALG-RAKLGKEAQLLFEKLEHRFTPSLQTYTVLLNGWCRVKNLMDAGKVWNEMIDK 349
CL+ G + KL +LL E E P +TY L+ K +++N+MI
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 348 GFKPDIVAHNTMLEGLLKCKKRSDAIKLFEVMKAKGPSPNTRSYTILIRDLCKQGKMDEA 169
+P I N +++ + +++ M KG P+ SYT+LIR L +GK EA
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 168 VASFEGMLSSGCEADAATFTCLVTGF 91
E ML G + + F
Sbjct: 527 CRYLEEMLDKGMKTPLIDYNKFAADF 552