BLASTX nr result
ID: Atropa21_contig00037579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037579
(788 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348896.1| PREDICTED: pentatricopeptide repeat-containi... 91 5e-16
ref|XP_004243267.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi... 78 4e-12
ref|XP_004305453.1| PREDICTED: pentatricopeptide repeat-containi... 76 1e-11
emb|CBI22025.3| unnamed protein product [Vitis vinifera] 74 4e-11
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-11
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi... 74 7e-11
gb|EMJ17652.1| hypothetical protein PRUPE_ppa023564mg [Prunus pe... 73 1e-10
gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theo... 71 5e-10
ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containi... 71 5e-10
gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis] 70 6e-10
ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citr... 70 6e-10
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,... 70 6e-10
ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containi... 70 8e-10
ref|XP_006293459.1| hypothetical protein CARUB_v10022804mg [Caps... 70 8e-10
ref|XP_002879907.1| pentatricopeptide repeat-containing protein ... 70 8e-10
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c... 70 8e-10
gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana] 70 8e-10
ref|NP_850342.1| pentatricopeptide repeat-containing protein [Ar... 70 8e-10
ref|XP_006446829.1| hypothetical protein CICLE_v10017576mg [Citr... 69 1e-09
>ref|XP_006348896.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Solanum tuberosum]
Length = 658
Score = 90.9 bits (224), Expect = 5e-16
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
CF+G L YNL+K+AG++ ITFVS+ISSCS LA I QGQQIHSD + GAIS+VA+VS
Sbjct: 266 CFEGALELYNLVKIAGFRPDKITFVSVISSCSELATIGQGQQIHSDVIKTGAISVVAVVS 325
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 326 SLISMYSKCGC 336
>ref|XP_004243267.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Solanum lycopersicum]
Length = 658
Score = 89.4 bits (220), Expect = 1e-15
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
CF+G L YNL+K+AG++ ITFVS+ISSCS LA I QGQQIHSD + G IS+VA+VS
Sbjct: 266 CFEGALELYNLVKIAGFRPDKITFVSVISSCSELATIGQGQQIHSDVIKTGVISVVAVVS 325
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 326 SLISMYSKCGC 336
>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 77.8 bits (190), Expect = 4e-12
Identities = 38/71 (53%), Positives = 53/71 (74%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L YN+MK+AG++ ITFVS++S+CS LA + QGQQIH++ + GA S++A+VS
Sbjct: 275 CPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVS 334
Query: 37 PLFSMYSTSGC 5
L SMYS SGC
Sbjct: 335 SLISMYSRSGC 345
>ref|XP_004305453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Fragaria vesca subsp. vesca]
Length = 641
Score = 76.3 bits (186), Expect = 1e-11
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = -2
Query: 211 KGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPL 32
+G L YN+MK+AG++ ITFVS++SSCS LA + QGQQIH++ + G S+VA++S L
Sbjct: 251 EGVLDQYNMMKIAGFRPDKITFVSVLSSCSELATLGQGQQIHAEVIKAGVSSVVAVISTL 310
Query: 31 FSMYSTSGC 5
+MYS GC
Sbjct: 311 ITMYSRCGC 319
>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 74.3 bits (181), Expect = 4e-11
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YN+MK+AG++ ITFVS+ISSCS LA + QGQQIH++ + GA +V+++S L SMYS
Sbjct: 273 YNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSR 332
Query: 13 SGC 5
GC
Sbjct: 333 CGC 335
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 74.3 bits (181), Expect = 4e-11
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YN+MK+AG++ ITFVS+ISSCS LA + QGQQIH++ + GA +V+++S L SMYS
Sbjct: 273 YNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSR 332
Query: 13 SGC 5
GC
Sbjct: 333 CGC 335
>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 73.6 bits (179), Expect = 7e-11
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = -2
Query: 268 CGTDGLNITCSVASTAKCFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQI 89
C N S + F+G L Y +MK+AG++ ITFVS+ISSCS LA + QG+QI
Sbjct: 265 CSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQI 324
Query: 88 HSDYMSIGAISMVAIVSPLFSMYSTSGC 5
H++ + GA S V++VS L SMYS GC
Sbjct: 325 HAEAVKAGASSEVSVVSSLVSMYSRCGC 352
>gb|EMJ17652.1| hypothetical protein PRUPE_ppa023564mg [Prunus persica]
Length = 670
Score = 73.2 bits (178), Expect = 1e-10
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YN+MK+AG++ +TFVS+ISSCS LA + QGQQIH++ + GA ++ A++S L SMYS
Sbjct: 286 YNIMKIAGFRPDKVTFVSVISSCSELATLGQGQQIHAEAIKAGASTVDAVISSLISMYSR 345
Query: 13 SGC 5
GC
Sbjct: 346 CGC 348
>gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 672
Score = 70.9 bits (172), Expect = 5e-10
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
Y +M +AG + ITFVS+ISSCS LA + QGQQIH+D + GA S+V ++S L SMYS
Sbjct: 288 YCMMNMAGVRPDKITFVSVISSCSELATLGQGQQIHADVVKTGASSVVGVISSLISMYSR 347
Query: 13 SGC 5
GC
Sbjct: 348 CGC 350
>ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cicer arietinum]
Length = 683
Score = 70.9 bits (172), Expect = 5e-10
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2
Query: 211 KGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPL 32
+G L Y++MK+AG++ ITFVS+ISSCS LA + QG+QIH++ + GA S+V+++S L
Sbjct: 293 EGVLDHYSMMKMAGFRPDRITFVSVISSCSELATLGQGKQIHAEVIKAGASSVVSVISSL 352
Query: 31 FSMYSTSG 8
SMYS G
Sbjct: 353 VSMYSRCG 360
>gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis]
Length = 673
Score = 70.5 bits (171), Expect = 6e-10
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YN+MKLAG + ITFVS+ISSCS LA + QGQQ H++ + GA S+V + S L SMYS
Sbjct: 289 YNIMKLAGLRPDKITFVSVISSCSDLATLGQGQQTHAEAIKAGACSVVDLTSTLVSMYSR 348
Query: 13 SGC 5
GC
Sbjct: 349 CGC 351
>ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citrus clementina]
gi|557549443|gb|ESR60072.1| hypothetical protein
CICLE_v10018004mg [Citrus clementina]
Length = 632
Score = 70.5 bits (171), Expect = 6e-10
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YNLM++ G++ ITFVS+ISSCS LA + QGQQIH++ + GA V ++S L SMYS
Sbjct: 248 YNLMRMVGFRPDKITFVSVISSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 307
Query: 13 SGC 5
GC
Sbjct: 308 CGC 310
>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 332
Score = 70.5 bits (171), Expect = 6e-10
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YN+M++ G++ ITF S+ISSCS L + QGQQIH++ + GA S+VA+ S L SMYS
Sbjct: 178 YNMMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYSR 237
Query: 13 SGC 5
GC
Sbjct: 238 CGC 240
>ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like isoform X1 [Citrus sinensis]
gi|568829336|ref|XP_006468979.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like isoform X2 [Citrus sinensis]
Length = 654
Score = 70.1 bits (170), Expect = 8e-10
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YNLM++ G++ ITFVS++SSCS LA + QGQQIH++ + GA V ++S L SMYS
Sbjct: 270 YNLMRMVGFRPDKITFVSVVSSCSELATLGQGQQIHAEVVKAGASLDVGVISSLISMYSR 329
Query: 13 SGC 5
GC
Sbjct: 330 CGC 332
>ref|XP_006293459.1| hypothetical protein CARUB_v10022804mg [Capsella rubella]
gi|482562167|gb|EOA26357.1| hypothetical protein
CARUB_v10022804mg [Capsella rubella]
Length = 650
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L Y +MK++G + ITFV+++SSCS LA QGQQIH++ + IGA S+VA+VS
Sbjct: 257 CPETVLYLYKIMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 317 SLISMYSKCGC 327
>ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325746|gb|EFH56166.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 565
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L Y +MK++G + ITFV+++SSCS LA QGQQIH++ + IGA S+VA+VS
Sbjct: 172 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 231
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 232 SLISMYSKCGC 242
>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L Y +MK++G + ITFV+++SSCS LA QGQQIH++ + IGA S+VA+VS
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 316
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 317 SLISMYSKCGC 327
>gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L Y +MK++G + ITFV+++SSCS LA QGQQIH++ + IGA S+VA+VS
Sbjct: 170 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 229
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 230 SLISMYSKCGC 240
>ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15
[Arabidopsis thaliana] gi|330254831|gb|AEC09925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 565
Score = 70.1 bits (170), Expect = 8e-10
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -2
Query: 217 CFKGTL*WYNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVS 38
C + L Y +MK++G + ITFV+++SSCS LA QGQQIH++ + IGA S+VA+VS
Sbjct: 172 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 231
Query: 37 PLFSMYSTSGC 5
L SMYS GC
Sbjct: 232 SLISMYSKCGC 242
>ref|XP_006446829.1| hypothetical protein CICLE_v10017576mg [Citrus clementina]
gi|557549440|gb|ESR60069.1| hypothetical protein
CICLE_v10017576mg [Citrus clementina]
Length = 559
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/63 (53%), Positives = 44/63 (69%)
Frame = -2
Query: 193 YNLMKLAGYQLFDITFVSMISSCSVLAPIRQGQQIHSDYMSIGAISMVAIVSPLFSMYST 14
YNLM++ G++ ITFVS+ISSCS LA I QGQQIH++ GA V ++S L S+YS
Sbjct: 272 YNLMRMVGFRPDKITFVSVISSCSELATIGQGQQIHAEVAKAGASLDVGVISSLISLYSR 331
Query: 13 SGC 5
GC
Sbjct: 332 CGC 334