BLASTX nr result
ID: Atropa21_contig00037354
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037354
(666 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 69 1e-09
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 69 1e-09
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 67 5e-09
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 67 6e-09
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 67 6e-09
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 66 8e-09
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 66 1e-08
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 63 7e-08
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 60 5e-07
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 58 3e-06
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 57 5e-06
emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera] 57 7e-06
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 68.9 bits (167), Expect = 1e-09
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNH------- 438
R IWK + +CF W+ A LT DN+ K LCS CFLCG +E+VNH
Sbjct: 238 RQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLHCKF 297
Query: 437 -----PLFLAILVSSGSC---IKLALSSWYEQ---SSSRVYTTAIPSCLFWSISTDRNDR 291
+FL++ S + I AL SW E + R IP+ ++W+ +RN R
Sbjct: 298 TQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSR 357
Query: 290 RLNDKINNIEQMGFGC 243
N+++++ C
Sbjct: 358 CFESVENSMQKVKLNC 373
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 68.9 bits (167), Expect = 1e-09
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNH------- 438
R IWK + +CF W+ A LT DN+ K LCS CFLCG +E+VNH
Sbjct: 162 RQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLHCKF 221
Query: 437 -----PLFLAILVSSGSC---IKLALSSWYEQ---SSSRVYTTAIPSCLFWSISTDRNDR 291
+FL++ S + I AL SW E + R IP+ ++W+ +RN R
Sbjct: 222 TQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSR 281
Query: 290 RLNDKINNIEQMGFGC 243
N+++++ C
Sbjct: 282 CFESVENSMQKVKLNC 297
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 67.0 bits (162), Expect = 5e-09
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Frame = -2
Query: 632 LEALKGLAVAL*RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVN 453
L+ + G WK + CFTW+ ACLT + LQK+ L CFLC +
Sbjct: 344 LQVMAGRPTHFWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTS 403
Query: 452 ESVNH------------PLFLAILVSSGSC---IKLALSSWYEQSSSRV---YTTAIPSC 327
E+ +H LFL+I + + L SW + S++ + IPSC
Sbjct: 404 ETNSHLFLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSC 463
Query: 326 LFWSISTDRNDRRLNDKINNIEQMGFGC 243
++WS+ +RN+R +++ N+I ++ + C
Sbjct: 464 IWWSVWKERNNRCFDNRSNSIHKVKWNC 491
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 66.6 bits (161), Expect = 6e-09
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNH------- 438
+ +WK + +CF W+ A LT DN+ K LCS CFLCG E+VNH
Sbjct: 289 KQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKY 348
Query: 437 -----PLFLAILVSSGSC---IKLALSSWYEQ---SSSRVYTTAIPSCLFWSISTDRNDR 291
+FL++ S + + AL SW E + R IP+ ++W+I +RN R
Sbjct: 349 TRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSR 408
Query: 290 RLNDKINNIEQMGFGC 243
N+++ + C
Sbjct: 409 CFEGIENSVQDVKLNC 424
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 66.6 bits (161), Expect = 6e-09
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNH------- 438
+ +WK + +CF W+ A LT DN+ K LCS CFLCG E+VNH
Sbjct: 395 KQVWKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETLETVNHLFLHCKY 454
Query: 437 -----PLFLAILVSSGSC---IKLALSSWYEQ---SSSRVYTTAIPSCLFWSISTDRNDR 291
+FL++ S + + AL SW E + R IP+ ++W+I +RN R
Sbjct: 455 TRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSR 514
Query: 290 RLNDKINNIEQMGFGC 243
N+++ + C
Sbjct: 515 CFEGIENSVQDVKLNC 530
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Solanum tuberosum]
Length = 284
Score = 66.2 bits (160), Expect = 8e-09
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Frame = -2
Query: 632 LEALKGLAVAL*RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVN 453
L+ + G L WK + CFTW+ ACLT + LQK+ L CFLC +
Sbjct: 111 LQVMAGRPKHLWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTS 170
Query: 452 ESVNH------------PLFLAILVSSGSC---IKLALSSWYEQSSSRV---YTTAIPSC 327
E+ +H LFL I + + L SW + S++ + IPSC
Sbjct: 171 ETNSHLFLHCNYTAQIWNLFLNISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSC 230
Query: 326 LFWSISTDRNDRRLNDKINNIEQMGFGC 243
++WS+ +RN R +++ N+I ++ + C
Sbjct: 231 IWWSVWKERNSRCFDNRSNSIHKVKWNC 258
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Solanum tuberosum]
Length = 284
Score = 65.9 bits (159), Expect = 1e-08
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Frame = -2
Query: 632 LEALKGLAVAL*RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVN 453
L+ + G WK + CFTW+ ACLT + LQK+ L CFLC +
Sbjct: 111 LQVMAGRPTHFWNYFWKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTS 170
Query: 452 ESVNH------------PLFLAILVSSGSC---IKLALSSWYEQ---SSSRVYTTAIPSC 327
E+ +H LFL+I + + L SW + S + + IPSC
Sbjct: 171 ETNSHLFLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGGTKSQKRWWRLIPSC 230
Query: 326 LFWSISTDRNDRRLNDKINNIEQMGFGC 243
++WS+ +RN R +++ N+I ++ + C
Sbjct: 231 IWWSVWKERNSRCFDNRSNSIHKVKWNC 258
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 63.2 bits (152), Expect = 7e-08
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNH------- 438
+ IWK + + FTW+A ACLTH+ +Q+ +CS CF+CG E +H
Sbjct: 93 KLIWKIKIPHKVSGFTWLAIRKACLTHEVIQRRGIQICSRCFMCGEEAEVNSHLFLHCRT 152
Query: 437 -----PLFLAIL----VSSGSCIKLALSSW----YEQSSSRVYTTAIPSCLFWSISTDRN 297
+FL IL V + ++L L W + S + IP+C++W++ +RN
Sbjct: 153 AANLWNMFLCILGVNWVMPKTTLEL-LRQWEGVGRRRRSKEDWWKCIPACIWWTLWKERN 211
Query: 296 DRRLNDKINNIEQM 255
+R + K+N+ +++
Sbjct: 212 ERSHDGKLNSTQKI 225
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 60.5 bits (145), Expect = 5e-07
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNHPLFLAIL 417
+ IW++ P+ FTWIA + ACLT DN++K + + C++C E+ H L +
Sbjct: 141 KLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQFPNRCYMCKKEAETPRHLLLHCEV 200
Query: 416 VS---------------SGSCIKLALSSW----YEQSSSRVYTTAIPSCLFWSISTDRND 294
S + +K A SW +++ +++ IP+C+FWSI +RN
Sbjct: 201 ASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIW-IMIPACIFWSIWLERNK 259
Query: 293 RRLNDKINNIEQMGFGCGHCENLAHIYQKVVILFKLENIFDLMNQKKLVQEISNGMKI 120
R + + + + C EN LF N++ +N ++L Q+ +N + +
Sbjct: 260 RCFDGESTALGILKTRC--TEN----------LFSWTNLYPAVNAEQL-QDFTNSLAL 304
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNHPLFL 426
R IWK + +CF W+ A LT DN+ K LCS CFLCG +E+VNH LFL
Sbjct: 256 RQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNH-LFL 311
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 57.0 bits (136), Expect = 5e-06
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNHPLFL 426
+ IWK+ A + CFTW+ ACLTHD LQ+ LCS CFLC E+ H LFL
Sbjct: 386 KEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRGFHLCSRCFLCHQEAETNGH-LFL 441
>emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]
Length = 1168
Score = 56.6 bits (135), Expect = 7e-06
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Frame = -2
Query: 596 RTIWKSIAAPRATCFTWIATH*ACLTHDNLQKEESFLCSICFLCGGVNESVNHPLFLAIL 417
R IW + + F W AT LT D LQ L + CFLCG E+VNH L I+
Sbjct: 1004 RGIWVDRVPTKVSFFAWEATWGKVLTLDKLQIRGVQLPNCCFLCGCAEENVNHILLHCIV 1063
Query: 416 VSS---------------GSCIKLALSSW---YEQSSSRVYTTAIPSCLFWSISTDRNDR 291
+ +K AL+SW + + +IP C+FW++ +RN
Sbjct: 1064 ARALWDIIFGLLDIKWVFPETVKEALTSWRGSFVGKKRKQIWKSIPLCIFWTVWKERNRL 1123
Query: 290 RLNDKINNIEQM--GFGCGHCENLAHIY 213
+ N++++ F C + N A +Y
Sbjct: 1124 AFRGGVVNVQRLKNSFVC-NLWNWAKVY 1150