BLASTX nr result
ID: Atropa21_contig00037334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037334
(604 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum] 116 3e-43
ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263... 116 5e-39
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 99 2e-37
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 97 1e-36
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum] 95 1e-36
ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer... 93 1e-32
gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao] 91 6e-31
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 94 9e-31
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 87 1e-30
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom... 89 2e-30
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 88 3e-30
gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao] 88 3e-30
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 87 5e-30
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 87 6e-30
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 89 1e-29
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao] 86 1e-29
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 89 1e-29
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom... 86 2e-29
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 91 3e-29
gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao] 90 2e-28
>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 367
Score = 116 bits (291), Expect(4) = 3e-43
Identities = 63/102 (61%), Positives = 70/102 (68%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+SSI+M PFE LYGRRC S IGWFDAF V P G DLLRDS++KVK A SRQ+
Sbjct: 136 HSSIDMAPFEALYGRRCRSPIGWFDAFEVRPWGTDLLRDSIEKVKSIQEKLLAAQSRQKE 195
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIG 138
YAD+KV D EFM E VLLKV MK MR K+ KL RYIG
Sbjct: 196 YADRKVRDLEFMEGEQVLLKVSPMKAVMRFGKRGKLIPRYIG 237
Score = 63.9 bits (154), Expect(4) = 3e-43
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQVL+DM+ ACVI+FGGH D FLPLAEF+YNNSY
Sbjct: 94 TDGQSERTIQVLEDMICACVIEFGGHWDSFLPLAEFSYNNSY 135
Score = 38.9 bits (89), Expect(4) = 3e-43
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
E+AL GL HP+FHVSM K+Y +G+++I+
Sbjct: 251 ELALPPGLSGVHPVFHVSMLKRYHGDGNYIIR 282
Score = 23.1 bits (48), Expect(4) = 3e-43
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TR++LST FHP+
Sbjct: 82 TRLDLSTAFHPQ 93
>ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263838, partial [Solanum
lycopersicum]
Length = 609
Score = 116 bits (291), Expect(4) = 5e-39
Identities = 62/106 (58%), Positives = 74/106 (69%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+S I+M PF LYGRRC S IGWFDA+ V+P G D+LRDSL+KVK +A SRQ+
Sbjct: 475 HSGIDMAPFVALYGRRCGSPIGWFDAYEVTPWGTDILRDSLEKVKSIQEKLLVAQSRQKE 534
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
YAD+KV D EFM + VLLKV MKG MR K+ KLS RYIG D+
Sbjct: 535 YADRKVRDLEFMEGDQVLLKVSPMKGVMRFGKRCKLSPRYIGPFDV 580
Score = 62.8 bits (151), Expect(4) = 5e-39
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQVL+DML ACVI+FGGH D FLPL EF+YNNSY
Sbjct: 433 TDGQSERTIQVLEDMLCACVIEFGGHWDNFLPLLEFSYNNSY 474
Score = 25.8 bits (55), Expect(4) = 5e-39
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSM 55
E+AL L HP+FHVSM
Sbjct: 590 ELALPPALSGVHPVFHVSM 608
Score = 23.1 bits (48), Expect(4) = 5e-39
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TR++LST FHP+
Sbjct: 421 TRLDLSTAFHPQ 432
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 99.0 bits (245), Expect(4) = 2e-37
Identities = 52/106 (49%), Positives = 69/106 (65%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+SSI+M PFE LYGRRC S +GWF++ PRG DLL+++LD+V+ A SR +S
Sbjct: 1556 HSSIQMAPFEALYGRRCRSPVGWFESTEPRPRGTDLLQEALDQVRVIQDRLRTAQSRHQS 1615
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
YADQ+ F V + V L+V MKG MR ++ KLS RYIG +I
Sbjct: 1616 YADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEI 1661
Score = 65.1 bits (157), Expect(4) = 2e-37
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -1
Query: 583 NFSS*TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
+F T+ QSE IQVL+DMLRACV+DFGG + FLPLAEFAYNNSY
Sbjct: 1509 SFHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQFLPLAEFAYNNSY 1555
Score = 35.0 bits (79), Expect(4) = 2e-37
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Frame = -2
Query: 114 GEVALTLGL----LSEHPIFHVSMFKKYDLEGSHVIQ 16
GEVA L L + HP+FHVSM ++Y + SHV+Q
Sbjct: 1666 GEVAYELALPPVFSAIHPVFHVSMLRRYVPDESHVLQ 1702
Score = 23.9 bits (50), Expect(4) = 2e-37
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TRV LST+FHP+
Sbjct: 1502 TRVHLSTSFHPQ 1513
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 97.4 bits (241), Expect(4) = 1e-36
Identities = 50/106 (47%), Positives = 69/106 (65%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
YSSI+M PFE LYGRRC S +GWF++ PRG DLL+++LD+V+ +A SR ++
Sbjct: 1253 YSSIQMAPFEALYGRRCRSPVGWFESTEARPRGTDLLQEALDQVRVIQDRLRMAQSRHQN 1312
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
YAD++ F V + V +V MKG MR ++ KLS RYIG +I
Sbjct: 1313 YADRRRRPLRFSVGDRVFFRVSPMKGVMRFGRRDKLSPRYIGPFEI 1358
Score = 63.5 bits (153), Expect(4) = 1e-36
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQVL+DML+ACV+DFGG D FLPLAEFAYNN+Y
Sbjct: 1211 TDGQSERTIQVLEDMLQACVMDFGGQWDQFLPLAEFAYNNNY 1252
Score = 33.1 bits (74), Expect(4) = 1e-36
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
E+AL + HP+FHV M ++Y + SHV+Q
Sbjct: 1368 ELALPPAFSAIHPVFHVPMLRRYVPDESHVLQ 1399
Score = 26.2 bits (56), Expect(4) = 1e-36
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TRV+LSTTFHP+
Sbjct: 1199 TRVDLSTTFHPQ 1210
>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
Length = 545
Score = 95.1 bits (235), Expect(4) = 1e-36
Identities = 51/106 (48%), Positives = 68/106 (64%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+SSI+M PFE LYGRRC S +GWF++ RG DLL+++LD+V+ A SR +S
Sbjct: 162 HSSIQMAPFEALYGRRCHSPVGWFESTEPRLRGTDLLQEALDQVRVIQDRLRTAQSRHQS 221
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
YADQ+ F V + V L+V MKG MR ++ KLS RYIG +I
Sbjct: 222 YADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEI 267
Score = 66.2 bits (160), Expect(4) = 1e-36
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQVL+DMLRACV+DFGG D FLPLAEFAYNNSY
Sbjct: 120 TDGQSERTIQVLEDMLRACVMDFGGQWDQFLPLAEFAYNNSY 161
Score = 35.0 bits (79), Expect(4) = 1e-36
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 4/37 (10%)
Frame = -2
Query: 114 GEVALTLGL----LSEHPIFHVSMFKKYDLEGSHVIQ 16
GEVA L L + HP+FHVSM ++Y + SHV+Q
Sbjct: 272 GEVAYELALPPVFSAIHPVFHVSMLRRYVPDESHVLQ 308
Score = 23.5 bits (49), Expect(4) = 1e-36
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TRV LST FHP+
Sbjct: 108 TRVHLSTAFHPQ 119
>ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 690
Score = 93.2 bits (230), Expect(4) = 1e-32
Identities = 50/107 (46%), Positives = 68/107 (63%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
SSI+M PFE LYGRRC S IGWF+ G +L++D+++KVK A SRQ+SY
Sbjct: 482 SSIQMAPFEALYGRRCRSPIGWFEVREAKLVGPELIQDAIEKVKLIRDRLVTAQSRQKSY 541
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
+D++ EF V E V L+V MKG +R KK KLS R+IG ++ +
Sbjct: 542 SDKRRRPLEFSVGEHVFLRVSPMKGVLRFGKKGKLSPRFIGPFEVLE 588
Score = 56.6 bits (135), Expect(4) = 1e-32
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -1
Query: 559 QSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
QSE IQ+L+DMLRACV+D GG D LPL EFAYNN+Y
Sbjct: 442 QSERTIQILEDMLRACVLDLGGSWDQHLPLMEFAYNNTY 480
Score = 33.5 bits (75), Expect(4) = 1e-32
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVI 19
+AL L HP+FH+SM +KY + SHVI
Sbjct: 597 LALPPDLSGVHPVFHISMLRKYLHDPSHVI 626
Score = 23.5 bits (49), Expect(4) = 1e-32
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -2
Query: 603 TRVELSTTFHPRL 565
TR++LST FHP++
Sbjct: 427 TRLKLSTAFHPQI 439
>gb|EOY19683.1| Uncharacterized protein TCM_044868 [Theobroma cacao]
Length = 403
Score = 90.9 bits (224), Expect(3) = 6e-31
Identities = 50/105 (47%), Positives = 64/105 (60%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S +GW + G +L++D+ +K+ A SRQ+SY
Sbjct: 193 TSIQMAPFEALYGRRCRSPVGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSY 252
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
AD + D EF V + V LKVL KG MR KK KLS RYIG +I
Sbjct: 253 ADNRRRDLEFQVGDHVFLKVLPTKGVMRFGKKGKLSPRYIGPFEI 297
Score = 53.9 bits (128), Expect(3) = 6e-31
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 150 TGGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 191
Score = 36.2 bits (82), Expect(3) = 6e-31
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 308 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 338
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 94.0 bits (232), Expect(3) = 9e-31
Identities = 49/106 (46%), Positives = 69/106 (65%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+SSI+M PFE LYGRRC S +GWF++ PRG DL+R++LD V+ A SR +S
Sbjct: 612 HSSIQMAPFEALYGRRCRSPVGWFESTKRRPRGTDLMREALDHVRVIQDRLRTAQSRHQS 671
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
YA+++ +F V V L+V MKG +R ++ KLS+RYIG +I
Sbjct: 672 YANRRRRPLKFAVGNRVFLRVSPMKGVIRFGRRGKLSARYIGPFEI 717
Score = 62.0 bits (149), Expect(3) = 9e-31
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE I+VL+DMLRACV+DFGG D LPLAEFAYNNSY
Sbjct: 570 TDGQSERTIKVLEDMLRACVMDFGGQWDQHLPLAEFAYNNSY 611
Score = 24.3 bits (51), Expect(3) = 9e-31
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
TRV+L TTFHP+
Sbjct: 558 TRVDLCTTFHPQ 569
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 86.7 bits (213), Expect(3) = 1e-30
Identities = 48/101 (47%), Positives = 60/101 (59%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ A SRQ+SY
Sbjct: 469 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSY 528
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIG 138
AD + D EF V + V LK KG MR KK KLS RYIG
Sbjct: 529 ADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPRYIG 569
Score = 54.3 bits (129), Expect(3) = 1e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 426 TDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 467
Score = 38.9 bits (89), Expect(3) = 1e-30
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+L+ SHVI+
Sbjct: 584 LALPPDLSNIHPVFHVSMLRKYNLDPSHVIR 614
>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 562
Score = 89.4 bits (220), Expect(3) = 2e-30
Identities = 50/107 (46%), Positives = 64/107 (59%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ A SRQ+SY
Sbjct: 418 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMISQKMLTAQSRQKSY 477
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + D EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 478 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILE 524
Score = 54.3 bits (129), Expect(3) = 2e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 375 TDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 416
Score = 35.8 bits (81), Expect(3) = 2e-30
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVI 19
+AL L + HP+FHVSM +KY+ + SHVI
Sbjct: 533 LALPPDLSNIHPVFHVSMLRKYNPDPSHVI 562
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 87.8 bits (216), Expect(3) = 3e-30
Identities = 49/107 (45%), Positives = 63/107 (58%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G + ++D+ +K+ A SRQ+SY
Sbjct: 699 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPEFVQDATEKIHMIRQRMLTAQSRQKSY 758
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + D EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 759 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILE 805
Score = 54.3 bits (129), Expect(3) = 3e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 656 TDGQSEWTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 697
Score = 36.2 bits (82), Expect(3) = 3e-30
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 814 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 844
>gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]
Length = 421
Score = 87.8 bits (216), Expect(3) = 3e-30
Identities = 49/107 (45%), Positives = 64/107 (59%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PF+ LYGRRC S IGW + G +L++D+ +K+ A SRQ+SY
Sbjct: 197 TSIQMAPFKALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHIIRQRMLTAQSRQKSY 256
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + D EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 257 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILE 303
Score = 54.3 bits (129), Expect(3) = 3e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 154 TDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 195
Score = 36.2 bits (82), Expect(3) = 3e-30
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 312 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 342
>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1263
Score = 86.7 bits (213), Expect(4) = 5e-30
Identities = 49/107 (45%), Positives = 62/107 (57%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G L++D+ +K+ A SRQ+SY
Sbjct: 1053 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPKLVQDATEKIHMIRQRMLTAQSRQKSY 1112
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
D + D EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 1113 VDNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILE 1159
Score = 54.3 bits (129), Expect(4) = 5e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 1010 TDGQSEQTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 1051
Score = 34.3 bits (77), Expect(4) = 5e-30
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = -2
Query: 114 GEVALTLGLLSE----HPIFHVSMFKKYDLEGSHVI 19
GEVA L L + HP+F VSM +KY+ + SHVI
Sbjct: 1162 GEVAYRLALPPDLSNIHPVFQVSMLRKYNPDPSHVI 1197
Score = 22.3 bits (46), Expect(4) = 5e-30
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
T+++ STTFHP+
Sbjct: 998 TKLDFSTTFHPQ 1009
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 87.0 bits (214), Expect(3) = 6e-30
Identities = 49/105 (46%), Positives = 62/105 (59%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ A SR +SY
Sbjct: 311 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRHKSY 370
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
AD + D EF V + V LKV KG MR KK KLS RYIG +I
Sbjct: 371 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEI 415
Score = 54.3 bits (129), Expect(3) = 6e-30
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 268 TDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 309
Score = 36.2 bits (82), Expect(3) = 6e-30
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 426 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 456
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 89.4 bits (220), Expect(3) = 1e-29
Identities = 50/107 (46%), Positives = 64/107 (59%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ A SRQ+SY
Sbjct: 1237 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSY 1296
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + D EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 1297 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILE 1343
Score = 51.2 bits (121), Expect(3) = 1e-29
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+ MLRACVID G + +LPL EFAYNNS+
Sbjct: 1194 TDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSF 1235
Score = 36.2 bits (82), Expect(3) = 1e-29
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 1352 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 1382
>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
Length = 415
Score = 86.3 bits (212), Expect(3) = 1e-29
Identities = 49/107 (45%), Positives = 62/107 (57%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ SRQ+SY
Sbjct: 205 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQKMLTTQSRQKSY 264
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + D EF V + V LKV KG MR KK KLS RYI DI +
Sbjct: 265 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIRPFDILE 311
Score = 53.9 bits (128), Expect(3) = 1e-29
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 162 TDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLVEFAYNNSF 203
Score = 36.2 bits (82), Expect(3) = 1e-29
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 320 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 350
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 89.0 bits (219), Expect(4) = 1e-29
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+ SI+M P+E LYGRRC S IGWF+ G DL+ +++KVK A SRQ+S
Sbjct: 1135 HPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKS 1194
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIG 138
Y D + EF V + V LKV MKG MR KK KLS RYIG
Sbjct: 1195 YTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIG 1236
Score = 89.0 bits (219), Expect(4) = 1e-29
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+ SI+M P+E LYGRRC S IGWF+ G DL+ +++KVK A SRQ+S
Sbjct: 2645 HPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKS 2704
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIG 138
Y D + EF V + V LKV MKG MR KK KLS RYIG
Sbjct: 2705 YTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIG 2746
Score = 89.0 bits (219), Expect(4) = 1e-29
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+ SI+M P+E LYGRRC S IGWF+ G DL+ +++KVK A SRQ+S
Sbjct: 4155 HPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKS 4214
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIG 138
Y D + EF V + V LKV MKG MR KK KLS RYIG
Sbjct: 4215 YTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIG 4256
Score = 58.5 bits (140), Expect(4) = 1e-29
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ Q+E IQ+L+DMLRACVIDF G+ D LPL EFAYNNSY
Sbjct: 1093 TDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSY 1134
Score = 58.5 bits (140), Expect(4) = 1e-29
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ Q+E IQ+L+DMLRACVIDF G+ D LPL EFAYNNSY
Sbjct: 2603 TDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSY 2644
Score = 58.5 bits (140), Expect(4) = 1e-29
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ Q+E IQ+L+DMLRACVIDF G+ D LPL EFAYNNSY
Sbjct: 4113 TDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSY 4154
Score = 27.7 bits (60), Expect(4) = 1e-29
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKK 46
E+ L L + HP+FH+SM KK
Sbjct: 1250 ELELPQELAAVHPVFHISMLKK 1271
Score = 27.7 bits (60), Expect(4) = 1e-29
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKK 46
E+ L L + HP+FH+SM KK
Sbjct: 2760 ELELPQELAAVHPVFHISMLKK 2781
Score = 27.7 bits (60), Expect(4) = 1e-29
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKK 46
E+ L L + HP+FH+SM KK
Sbjct: 4270 ELELPQELAAVHPVFHISMLKK 4291
Score = 20.8 bits (42), Expect(4) = 1e-29
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
++V LST FHP+
Sbjct: 1081 SKVNLSTAFHPQ 1092
Score = 20.8 bits (42), Expect(4) = 1e-29
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
++V LST FHP+
Sbjct: 2591 SKVNLSTAFHPQ 2602
Score = 20.8 bits (42), Expect(4) = 1e-29
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
++V LST FHP+
Sbjct: 4101 SKVNLSTAFHPQ 4112
>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 448
Score = 85.5 bits (210), Expect(3) = 2e-29
Identities = 49/107 (45%), Positives = 63/107 (58%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K+ A SRQ+SY
Sbjct: 238 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSY 297
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
AD + EF V + V LKV KG MR KK KLS RYIG +I +
Sbjct: 298 ADNRRRYLEFQVGDHVFLKVSPTKGIMRFGKKGKLSPRYIGPFEILE 344
Score = 54.3 bits (129), Expect(3) = 2e-29
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ QSE IQ L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 195 TDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 236
Score = 36.2 bits (82), Expect(3) = 2e-29
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 353 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 383
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 91.3 bits (225), Expect(4) = 3e-29
Identities = 53/108 (49%), Positives = 64/108 (59%)
Frame = -3
Query: 443 YSSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRS 264
+SSI+M P+E LYGRRC S IGWF+ G DL+ +++KVK A SRQ+S
Sbjct: 1386 HSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKS 1445
Query: 263 YADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDITQ 120
Y D + EF V + V LKV MKG MR KK KLS RYIG I Q
Sbjct: 1446 YTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQ 1493
Score = 55.1 bits (131), Expect(4) = 3e-29
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = -1
Query: 568 TNVQSE*IIQVLKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
T+ Q+E IQ L+DMLRACVIDF + D LPL EFAYNNSY
Sbjct: 1344 TDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIEFAYNNSY 1385
Score = 27.7 bits (60), Expect(4) = 3e-29
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 111 EVALTLGLLSEHPIFHVSMFKK 46
E+ L L + HP+FH+SM KK
Sbjct: 1501 ELELPQELAAVHPVFHISMLKK 1522
Score = 20.8 bits (42), Expect(4) = 3e-29
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 603 TRVELSTTFHPR 568
++V LST FHP+
Sbjct: 1332 SKVSLSTAFHPQ 1343
>gb|EOY26390.1| Uncharacterized protein TCM_027940 [Theobroma cacao]
Length = 1052
Score = 90.1 bits (222), Expect(3) = 2e-28
Identities = 50/105 (47%), Positives = 64/105 (60%)
Frame = -3
Query: 440 SSIEMEPFETLYGRRCCSLIGWFDAFGVSPRGIDLLRDSLDKVKXXXXXXXIAYSRQRSY 261
+SI+M PFE LYGRRC S IGW + G +L++D+ +K++ A SRQ+SY
Sbjct: 842 TSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIRMIRQKMLTAQSRQKSY 901
Query: 260 ADQKV*DFEFMVCE*VLLKVLLMKGEMRLRKKSKLSSRYIGLSDI 126
AD + D EF V + V LKV KG MR KK KLS RYIG +I
Sbjct: 902 ADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEI 946
Score = 46.2 bits (108), Expect(3) = 2e-28
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -1
Query: 535 LKDMLRACVIDFGGH*D*FLPLAEFAYNNSY 443
L+DMLRACVID G + +LPL EFAYNNS+
Sbjct: 810 LEDMLRACVIDLGVRWEQYLPLVEFAYNNSF 840
Score = 36.2 bits (82), Expect(3) = 2e-28
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 108 VALTLGLLSEHPIFHVSMFKKYDLEGSHVIQ 16
+AL L + HP+FHVSM +KY+ + SHVI+
Sbjct: 957 LALPPDLSNIHPVFHVSMLRKYNPDPSHVIR 987