BLASTX nr result
ID: Atropa21_contig00037166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037166
(511 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 180 2e-43
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 180 2e-43
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum] 180 2e-43
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 179 3e-43
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 177 1e-42
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 176 3e-42
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 176 3e-42
sp|Q8L6J4.2|RPO1A_TOBAC RecName: Full=DNA-directed RNA polymeras... 176 3e-42
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 176 3e-42
emb|CAC95023.1| mitochondrial RNA polymerase [Nicotiana tabacum] 176 3e-42
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 173 2e-41
ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 173 2e-41
ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 173 2e-41
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p... 172 4e-41
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 171 7e-41
emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera] 171 9e-41
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 170 2e-40
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe... 170 2e-40
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 169 3e-40
ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 169 5e-40
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 180 bits (456), Expect = 2e-43
Identities = 86/92 (93%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES
Sbjct: 911 LDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 971 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 180 bits (456), Expect = 2e-43
Identities = 86/92 (93%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES
Sbjct: 911 LDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 971 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 715
Score = 180 bits (456), Expect = 2e-43
Identities = 86/92 (93%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES
Sbjct: 624 LDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 683
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 684 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
tuberosum]
Length = 993
Score = 179 bits (454), Expect = 3e-43
Identities = 87/92 (94%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAITCKEAGLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 902 LDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 961
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 962 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 993
Score = 177 bits (449), Expect = 1e-42
Identities = 86/92 (93%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKEAGLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 902 LDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 961
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 962 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 176 bits (446), Expect = 3e-42
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 911 LDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 971 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 176 bits (446), Expect = 3e-42
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 911 LDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 971 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>sp|Q8L6J4.2|RPO1A_TOBAC RecName: Full=DNA-directed RNA polymerase 1A; AltName:
Full=NictaRpoT1-syl; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1A
Length = 155
Score = 176 bits (446), Expect = 3e-42
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 64 LDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 123
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 124 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 155
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 176 bits (446), Expect = 3e-42
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 911 LDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 971 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002
>emb|CAC95023.1| mitochondrial RNA polymerase [Nicotiana tabacum]
Length = 173
Score = 176 bits (446), Expect = 3e-42
Identities = 85/92 (92%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CKE+GLSFAGVHDSYWTHA DVDQMNKILREKFVELYDAPILENLLES
Sbjct: 82 LDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLES 141
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 142 FQQSFPDLQFPPLPERGDFDLREVLESPYFFN 173
>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X3 [Cicer
arietinum]
Length = 1053
Score = 173 bits (439), Expect = 2e-41
Identities = 81/92 (88%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK AGLSFAGVHDSYWTHACDVD MNKILREKFVELY+ PILENLLES
Sbjct: 962 LDGSHMMMTAVACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLES 1021
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQ+SFP+LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 1022 FQESFPSLQFPPLPERGDFDLREVLESPYFFN 1053
>ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X2 [Cicer
arietinum]
Length = 1090
Score = 173 bits (439), Expect = 2e-41
Identities = 81/92 (88%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK AGLSFAGVHDSYWTHACDVD MNKILREKFVELY+ PILENLLES
Sbjct: 999 LDGSHMMMTAVACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLES 1058
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQ+SFP+LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 1059 FQESFPSLQFPPLPERGDFDLREVLESPYFFN 1090
>ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like isoform X1 [Cicer
arietinum]
Length = 1126
Score = 173 bits (439), Expect = 2e-41
Identities = 81/92 (88%), Positives = 87/92 (94%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK AGLSFAGVHDSYWTHACDVD MNKILREKFVELY+ PILENLLES
Sbjct: 1035 LDGSHMMMTAVACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLES 1094
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQ+SFP+LQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 1095 FQESFPSLQFPPLPERGDFDLREVLESPYFFN 1126
>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
[Chenopodium album]
Length = 988
Score = 172 bits (436), Expect = 4e-41
Identities = 80/92 (86%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CK+AG++FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLLES
Sbjct: 897 LDGSHMMMTAIACKKAGMNFAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLES 956
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQ+SFPTLQFPPLPE+GDFDLREV+ESPYFFN
Sbjct: 957 FQESFPTLQFPPLPERGDFDLREVLESPYFFN 988
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 171 bits (434), Expect = 7e-41
Identities = 79/92 (85%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK+AGL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+APILENLLES
Sbjct: 905 LDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLES 964
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQ+SFP+L FPPLPE+GDFDLREV+ESPYFFN
Sbjct: 965 FQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996
>emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera]
Length = 168
Score = 171 bits (433), Expect = 9e-41
Identities = 79/92 (85%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CK+AGL+FAGVHDSYWTHACDVD+MN+ILREKFV+LY+ PILENLLES
Sbjct: 77 LDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVQLYETPILENLLES 136
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP L+FPPLPE+GDFDLREV+ESPYFFN
Sbjct: 137 FQQSFPALEFPPLPERGDFDLREVLESPYFFN 168
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 170 bits (431), Expect = 2e-40
Identities = 78/92 (84%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TAI CK+AGL+FAGVHDSYWTHACDVD+MN++LREKFV+LY+ PILENLLES
Sbjct: 944 LDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLES 1003
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFP L+FPPLPE+GDFDLREV+ESPYFFN
Sbjct: 1004 FQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035
>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 170 bits (430), Expect = 2e-40
Identities = 77/92 (83%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK+AGL+FAGVHDSYWTHACD+D+MN+ILREKFVELY+APILENLLE
Sbjct: 915 LDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEG 974
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFPTL FPPLP++GDFDLR+V+ESPYFFN
Sbjct: 975 FQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 169 bits (429), Expect = 3e-40
Identities = 77/92 (83%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+TCK AGL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+ P+LENLLES
Sbjct: 498 LDGSHMMMTAVTCKRAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLES 557
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
FQQSFPTL FPPLPE+GDFDL++V++SPYFFN
Sbjct: 558 FQQSFPTLSFPPLPERGDFDLQDVLKSPYFFN 589
>ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer
arietinum]
Length = 1002
Score = 169 bits (427), Expect = 5e-40
Identities = 76/92 (82%), Positives = 89/92 (96%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LDGSHMM-TAITCKEAGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLES 177
LDGSHMM TA+ CK+AG+SFAGVHDSYWTHACDVD+MN+ILREKFVELY+APILENLLE
Sbjct: 911 LDGSHMMMTAVACKKAGMSFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLED 970
Query: 178 FQQSFPTLQFPPLPEQGDFDLREVVESPYFFN 273
F+++FPTL+FPPLPE+GDFDLR+V+ESPYFFN
Sbjct: 971 FEKTFPTLKFPPLPERGDFDLRQVLESPYFFN 1002