BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037125
         (641 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   167   2e-50
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     163   3e-49
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]             145   2e-40
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581...   130   8e-39
gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobrom...   136   7e-38
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom...   136   7e-38
ref|XP_004239522.1| PREDICTED: uncharacterized protein LOC101244...   162   8e-38
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              129   2e-37
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom...   134   7e-37
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]   132   9e-37
ref|XP_004243106.1| PREDICTED: uncharacterized protein LOC101256...   125   2e-36
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]         120   2e-36
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]    134   4e-36
gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobrom...   131   2e-35
gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobrom...   121   4e-35
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   119   5e-35
gb|EOY31685.1| Uncharacterized protein TCM_038736 [Theobroma cacao]   118   8e-35
gb|EOY21520.1| CCHC-type integrase, putative [Theobroma cacao]        125   8e-35
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...   124   1e-34
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   117   1e-34

>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  167 bits (423), Expect(2) = 2e-50
 Identities = 83/140 (59%), Positives = 106/140 (75%)
 Frame = -1

Query: 422  KEKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN* 243
            +++VIAY SRQLK HE+NYPTH+LELAA++F LKI  HY+YGV CE+YTD+ SLQY+ + 
Sbjct: 990  QDRVIAYASRQLKIHERNYPTHDLELAAVVFALKIWRHYLYGVRCEIYTDHRSLQYIMSQ 1049

Query: 242  KDXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQ 63
            +D           LK+YD++ILY+P K N+VADALSRKAVSMGSL  L +EE P  MD+Q
Sbjct: 1050 RDLNSRQRRWIELLKDYDLSILYHPGKANVVADALSRKAVSMGSLAFLSVEERPLAMDIQ 1109

Query: 62   SLVNRFVRLNISEPDRVLAY 3
             L N  VRL+IS+  RVLA+
Sbjct: 1110 FLANSMVRLDISDSRRVLAH 1129



 Score = 58.5 bits (140), Expect(2) = 2e-50
 Identities = 29/75 (38%), Positives = 42/75 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+E + ++A PLTRLT+  V   WSE+CE  F                +E E F +Y 
Sbjct: 917  RRFVESFSTLATPLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEGEGFTVYC 976

Query: 459  DASGVSLVCIDVQRE 415
            DASGV L C+ +Q++
Sbjct: 977  DASGVGLGCVLMQQD 991


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  163 bits (413), Expect(2) = 3e-49
 Identities = 82/138 (59%), Positives = 103/138 (74%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            +VIAY SRQLK HE NYPTH+LELAA++F LKI  HY+YGV CE+YTD+ SLQY+ + +D
Sbjct: 1148 RVIAYASRQLKIHEHNYPTHDLELAAVVFALKIWRHYLYGVRCEIYTDHRSLQYIMSQRD 1207

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YD++ILY+P K N+VADALSRKAVSMGSL  L +EE P  +D+QSL
Sbjct: 1208 LNSRQRRWIELLKDYDLSILYHPGKANVVADALSRKAVSMGSLAFLSVEERPLALDIQSL 1267

Query: 56   VNRFVRLNISEPDRVLAY 3
             N  VRL+IS+   VLA+
Sbjct: 1268 ANSMVRLDISDSRCVLAF 1285



 Score = 58.5 bits (140), Expect(2) = 3e-49
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+EG+ +IAA LTRLT+  V   WSE+CE  F                +E E F +Y 
Sbjct: 1073 RRFVEGFSTIAALLTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEGEGFTVYC 1132

Query: 459  DASGVSLVCIDVQR 418
            DASGV L C+ +Q+
Sbjct: 1133 DASGVGLGCVLMQQ 1146


>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 624

 Score =  145 bits (365), Expect(2) = 2e-40
 Identities = 77/139 (55%), Positives = 94/139 (67%)
 Frame = -1

Query: 422 KEKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN* 243
           ++ VIAY SRQLK HE+NYPTH+LELAA++F LK   HY+YGV CEVYTD+ SLQY+F  
Sbjct: 355 EKNVIAYASRQLKVHERNYPTHDLELAAVVFALKQWRHYLYGVKCEVYTDHRSLQYVFTQ 414

Query: 242 KDXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQ 63
           KD           LK+YD+TILY+P K N+VA ALSRKA SMGSL  L     P   +VQ
Sbjct: 415 KDLNLRQRRWMELLKDYDITILYHPGKANVVAVALSRKAGSMGSLAHLQASRHPLAREVQ 474

Query: 62  SLVNRFVRLNISEPDRVLA 6
            L N  +RL ++E    LA
Sbjct: 475 ILANDLMRLEVNEKGGFLA 493



 Score = 47.4 bits (111), Expect(2) = 2e-40
 Identities = 26/76 (34%), Positives = 41/76 (53%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           RQF++G+ SIA+ LT LT++ V   WS +CE  FQ               +E ++F +Y 
Sbjct: 282 RQFVKGFSSIASQLTNLTKQNVPFGWSAECEESFQKLKTLLTTAPILTLPVEGKNFIVYC 341

Query: 459 DASGVSLVCIDVQRES 412
           DAS   L  + +Q ++
Sbjct: 342 DASYSGLGAVLMQEKN 357


>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
          Length = 1946

 Score =  130 bits (326), Expect(2) = 8e-39
 Identities = 71/127 (55%), Positives = 87/127 (68%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HEKNYPTH+LELAA++F LKI  HY+YGVH +V+TD+ SLQY+F  KD
Sbjct: 1325 KVIAYASRQLKVHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDVFTDHKSLQYVFTQKD 1384

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YDM++ Y+P K N+VADALSR  VSMGSL  + I +     +V  L
Sbjct: 1385 LNLRQRRWLEFLKDYDMSVHYHPGKANVVADALSR--VSMGSLAHVDIGDREMAREVHRL 1442

Query: 56   VNRFVRL 36
                VRL
Sbjct: 1443 ARLGVRL 1449



 Score = 57.0 bits (136), Expect(2) = 8e-39
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+ G+ SIA+P+T+LTQKK   +W+++CE  FQ                  E F +Y 
Sbjct: 1250 RRFVNGFSSIASPMTKLTQKKAKFEWTDECERSFQTLKDKLVSAPILSLPDGLEGFVVYC 1309

Query: 459  DASGVSLVCIDVQ 421
            DAS V L C+ +Q
Sbjct: 1310 DASRVGLGCVLMQ 1322


>gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 878

 Score =  136 bits (343), Expect(2) = 7e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%)
 Frame = -1

Query: 416 KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
           KVIAY SRQLK HE+NYP H+LE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 439 KVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 498

Query: 236 XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                      LK+YD TILY+P K N+VADALSRK  SMGSL  ++I     + ++ SL
Sbjct: 499 LNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHIFIGRRSLVREIHSL 556

Query: 56  VNRFVRLNISEPDRVLAY 3
            +  VRL ++E + +LA+
Sbjct: 557 GDIGVRLEVAETNALLAH 574



 Score = 47.4 bits (111), Expect(2) = 7e-38
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 364 RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFC 423

Query: 459 DASGVSLVCIDVQ 421
           DASGV L C+ +Q
Sbjct: 424 DASGVGLGCVLMQ 436


>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 666

 Score =  136 bits (343), Expect(2) = 7e-38
 Identities = 73/138 (52%), Positives = 95/138 (68%)
 Frame = -1

Query: 416 KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
           KVIAY SRQLK HE+NYP HNLE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 156 KVIAYASRQLKRHEQNYPIHNLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 215

Query: 236 XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                      LK+YD TILY+P K N+VADALSRK  SMGSL  + I     + ++ SL
Sbjct: 216 LNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIGRRSLVREIHSL 273

Query: 56  VNRFVRLNISEPDRVLAY 3
            +  VRL ++E + +LA+
Sbjct: 274 GDIGVRLEVAETNALLAH 291



 Score = 47.4 bits (111), Expect(2) = 7e-38
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 81  RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFC 140

Query: 459 DASGVSLVCIDVQ 421
           DASGV L C+ +Q
Sbjct: 141 DASGVGLGCVLMQ 153


>ref|XP_004239522.1| PREDICTED: uncharacterized protein LOC101244956 [Solanum
            lycopersicum]
          Length = 933

 Score =  162 bits (410), Expect = 8e-38
 Identities = 85/140 (60%), Positives = 101/140 (72%)
 Frame = -1

Query: 422  KEKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN* 243
            K KVIAY SRQLK HEKNYP H+L+LA ++F LKI SHY+Y VHCEV+TD+ SL Y+FN 
Sbjct: 616  KGKVIAYASRQLKVHEKNYPIHDLKLATVVFALKIWSHYLYDVHCEVFTDHRSLHYIFNK 675

Query: 242  KDXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQ 63
            +D           L +Y+MTILY+P K+N+VADA S KA SMGSL ML   E P   DVQ
Sbjct: 676  RDLNLRQWRWLELLNDYEMTILYHPGKENVVADASSWKAASMGSLAMLQGSEHPLAKDVQ 735

Query: 62   SLVNRFVRLNISEPDRVLAY 3
            SL NRFVRL+ SE  +VLAY
Sbjct: 736  SLANRFVRLDYSEFCKVLAY 755


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  129 bits (325), Expect(2) = 2e-37
 Identities = 69/138 (50%), Positives = 92/138 (66%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HE+NYPTH+LE+ A+IF LKI  HY+YG  CE++TD+ SL+Y+F  +D
Sbjct: 1808 KVIAYASRQLKKHEQNYPTHDLEMTAVIFALKIWRHYLYGETCEIFTDHKSLKYIFQQRD 1867

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YD TI Y+P K N+VADALSRK  S GSL  +     P I ++  L
Sbjct: 1868 LNLRQRRWMELLKDYDCTIHYHPGKANVVADALSRK--SSGSLAHIQEVRRPLIRELHEL 1925

Query: 56   VNRFVRLNISEPDRVLAY 3
            V+  VR ++SE   ++A+
Sbjct: 1926 VDEGVRFDLSEAGAMIAH 1943



 Score = 52.4 bits (124), Expect(2) = 2e-37
 Identities = 28/73 (38%), Positives = 37/73 (50%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+E +  I+APLT+LTQK V  QWSE CE  F                     + +Y 
Sbjct: 1733 RRFVENFSRISAPLTKLTQKNVKFQWSEACEKSFLELKERLTTAPVLAVPSGSGGYTVYC 1792

Query: 459  DASGVSLVCIDVQ 421
            DAS V L C+ +Q
Sbjct: 1793 DASRVGLGCVLMQ 1805


>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1502

 Score =  134 bits (336), Expect(2) = 7e-37
 Identities = 72/138 (52%), Positives = 94/138 (68%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HE NYP H+LE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 954  KVIAYASRQLKRHEHNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 1013

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YD TILY+P K N+VADALSRK  SMGSL  + I     + ++ SL
Sbjct: 1014 LNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIGRRSLVREIHSL 1071

Query: 56   VNRFVRLNISEPDRVLAY 3
             +  VRL ++E + +LA+
Sbjct: 1072 GDIGVRLEVAETNALLAH 1089



 Score = 46.6 bits (109), Expect(2) = 7e-37
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 879  RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYMVFC 938

Query: 459  DASGVSLVCIDVQ 421
            DASGV L C+ +Q
Sbjct: 939  DASGVGLGCVLMQ 951


>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
          Length = 860

 Score =  132 bits (331), Expect(2) = 9e-37
 Identities = 71/138 (51%), Positives = 93/138 (67%)
 Frame = -1

Query: 416 KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
           KVIAY SRQLK HE+NYP H+LE+AAI+F LKI  HY+YG  CE+Y D+ SL+Y+F  +D
Sbjct: 273 KVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYMDHKSLKYIFQQRD 332

Query: 236 XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                      LK+YD TILY+P K N+VADALSRK  SMGSL  + I     + ++ SL
Sbjct: 333 LNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIGRRSLVREIHSL 390

Query: 56  VNRFVRLNISEPDRVLAY 3
            +  VRL ++E   +LA+
Sbjct: 391 GDIGVRLEVAETSALLAH 408



 Score = 48.1 bits (113), Expect(2) = 9e-37
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 198 RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTRGYTVFC 257

Query: 459 DASGVSLVCIDVQ 421
           DASGV L C+ +Q
Sbjct: 258 DASGVGLGCVLMQ 270


>ref|XP_004243106.1| PREDICTED: uncharacterized protein LOC101256304 [Solanum
           lycopersicum]
          Length = 647

 Score =  125 bits (313), Expect(2) = 2e-36
 Identities = 69/131 (52%), Positives = 88/131 (67%)
 Frame = -1

Query: 416 KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
           KVIAY SRQL+ HEKNY TH+LELA +I  +KI  HY+YGVH ++YTD+ SLQY+F  K+
Sbjct: 439 KVIAYASRQLRKHEKNYRTHDLELAVVIHAMKIWMHYLYGVHVDIYTDHKSLQYIFKQKE 498

Query: 236 XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                      LK+YD+ ILY+P K N+VADALSRK  SMGSL  +  E    + ++Q L
Sbjct: 499 LNLRQRRWLELLKDYDIDILYHPGKANIVADALSRK--SMGSLTDVQPERRDMVWEIQWL 556

Query: 56  VNRFVRLNISE 24
            +  VRL  SE
Sbjct: 557 SSLGVRLANSE 567



 Score = 54.3 bits (129), Expect(2) = 2e-36
 Identities = 28/73 (38%), Positives = 39/73 (53%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F+E + SI+APL RLTQK    QW++ CE  FQ                  + + +Y 
Sbjct: 364 RRFVEKFASISAPLKRLTQKAAKLQWTDACERSFQLLKDKLTTAPVLTLPEGPDGYVIYC 423

Query: 459 DASGVSLVCIDVQ 421
           DASGV L C+ +Q
Sbjct: 424 DASGVGLGCVLMQ 436


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score =  120 bits (301), Expect(2) = 2e-36
 Identities = 63/111 (56%), Positives = 82/111 (73%)
 Frame = -1

Query: 419  EKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*K 240
            +KVIAY SRQLKAHEKNYPTH+LELAA++F LKI  HY+YGVH +++TD+ SLQY+   K
Sbjct: 755  DKVIAYASRQLKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQK 814

Query: 239  DXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEE 87
            +           LK+Y ++ILY+P K N+VAD+LSR  +SMGS    +IEE
Sbjct: 815  ELNLRQRRWLELLKDYVLSILYHPGKANVVADSLSR--LSMGS--TAHIEE 861



 Score =  120 bits (301), Expect(2) = 2e-36
 Identities = 63/111 (56%), Positives = 82/111 (73%)
 Frame = -1

Query: 419  EKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*K 240
            +KVIAY SRQLKAHEKNYPTH+LELAA++F LKI  HY+YGVH +++TD+ SLQY+   K
Sbjct: 2265 DKVIAYASRQLKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQK 2324

Query: 239  DXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEE 87
            +           LK+Y ++ILY+P K N+VAD+LSR  +SMGS    +IEE
Sbjct: 2325 ELNLRQRRWLELLKDYVLSILYHPGKANVVADSLSR--LSMGS--TAHIEE 2371



 Score =  120 bits (301), Expect(2) = 2e-36
 Identities = 63/111 (56%), Positives = 82/111 (73%)
 Frame = -1

Query: 419  EKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*K 240
            +KVIAY SRQLKAHEKNYPTH+LELAA++F LKI  HY+YGVH +++TD+ SLQY+   K
Sbjct: 3775 DKVIAYASRQLKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQK 3834

Query: 239  DXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEE 87
            +           LK+Y ++ILY+P K N+VAD+LSR  +SMGS    +IEE
Sbjct: 3835 ELNLRQRRWLELLKDYVLSILYHPGKANVVADSLSR--LSMGS--TAHIEE 3881



 Score = 58.5 bits (140), Expect(2) = 2e-36
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F+EG+ +IA+PLT+LTQK V  QWSE CE  FQ                  + F ++ 
Sbjct: 681 RRFVEGFSTIASPLTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHC 740

Query: 459 DASGVSLVCIDVQRE 415
           DAS V L C+ +Q +
Sbjct: 741 DASRVGLGCVLMQND 755



 Score = 58.5 bits (140), Expect(2) = 2e-36
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+EG+ +IA+PLT+LTQK V  QWSE CE  FQ                  + F ++ 
Sbjct: 2191 RRFVEGFSTIASPLTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHC 2250

Query: 459  DASGVSLVCIDVQRE 415
            DAS V L C+ +Q +
Sbjct: 2251 DASRVGLGCVLMQND 2265



 Score = 58.5 bits (140), Expect(2) = 2e-36
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+EG+ +IA+PLT+LTQK V  QWSE CE  FQ                  + F ++ 
Sbjct: 3701 RRFVEGFSTIASPLTKLTQKTVKLQWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHC 3760

Query: 459  DASGVSLVCIDVQRE 415
            DAS V L C+ +Q +
Sbjct: 3761 DASRVGLGCVLMQND 3775


>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 1480

 Score =  134 bits (338), Expect(2) = 4e-36
 Identities = 72/138 (52%), Positives = 95/138 (68%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HE+NYP H+LE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 959  KVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 1018

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YD TILY+P K N+VADALSRK  SMGSL  + I     + ++ SL
Sbjct: 1019 LNLRQHRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIGRRSLVREIHSL 1076

Query: 56   VNRFVRLNISEPDRVLAY 3
             +  VRL ++E + +LA+
Sbjct: 1077 GDIGVRLEVAETNALLAH 1094



 Score = 43.5 bits (101), Expect(2) = 4e-36
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F++ +  I A LT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 884  RRFVKDFSKIVALLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLLQGTGGYTVFC 943

Query: 459  DASGVSLVCIDVQ 421
            DASGV L C+ +Q
Sbjct: 944  DASGVGLGCVLMQ 956


>gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1401

 Score =  131 bits (330), Expect(2) = 2e-35
 Identities = 70/138 (50%), Positives = 93/138 (67%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HE+NYP H+LE+A I+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 827  KVIAYASRQLKRHEQNYPIHDLEMATIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 886

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                       LK+YD TILY+P K N+VAD LSRK  SMGSL  + I     + ++ SL
Sbjct: 887  LNLRQRRWMELLKDYDCTILYHPGKANVVADVLSRK--SMGSLAHISIGRRSLVREIHSL 944

Query: 56   VNRFVRLNISEPDRVLAY 3
             +  VRL ++E + +LA+
Sbjct: 945  GDIGVRLEVAETNALLAH 962



 Score = 44.3 bits (103), Expect(2) = 2e-35
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 752 RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFC 811

Query: 459 DASGVSLVCIDVQ 421
           DAS V L C+ +Q
Sbjct: 812 DASRVGLGCVLMQ 824


>gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1336

 Score =  121 bits (303), Expect(2) = 4e-35
 Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
 Frame = -1

Query: 419  EKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*K 240
            EKV+AY SRQLK HE NYPTH+LELAA++F LKI  HY+YG HC+++TD+ SL+YL   K
Sbjct: 855  EKVVAYASRQLKRHEANYPTHDLELAAVVFALKIWRHYLYGEHCQIFTDHKSLKYLLTQK 914

Query: 239  DXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRK-AVSMGSLDMLYIEECPNIMDVQ 63
            +           +K+YD+ I Y+P K N+VADALSRK + S+ +L   Y    P +++++
Sbjct: 915  EINLRQRRWLELIKDYDLVIDYHPGKANVVADALSRKSSSSLAALQNCYF---PALIEMK 971

Query: 62   SL 57
            SL
Sbjct: 972  SL 973



 Score = 53.5 bits (127), Expect(2) = 4e-35
 Identities = 29/75 (38%), Positives = 41/75 (54%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F++G+  IAAPLTRLT+K V   W + CE RFQ               +  + F +Y 
Sbjct: 781  RRFVQGFSLIAAPLTRLTRKGVKFVWDDVCENRFQELKNRLTFAPVLTLPVNGKGFVVYS 840

Query: 459  DASGVSLVCIDVQRE 415
            DAS + L C+ +Q E
Sbjct: 841  DASKLGLGCVLMQDE 855


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  119 bits (298), Expect(2) = 5e-35
 Identities = 61/110 (55%), Positives = 80/110 (72%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HEKNYPTH+LELA ++F LK+  HY+YGVH +++TD+ SLQY+   K+
Sbjct: 974  KVIAYASRQLKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKE 1033

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEE 87
                       LK+YD++ILY+P K N+VAD+LSR  +SMGS    +IEE
Sbjct: 1034 LNLRQRRWLELLKDYDLSILYHPGKANVVADSLSR--LSMGS--TTHIEE 1079



 Score = 55.1 bits (131), Expect(2) = 5e-35
 Identities = 29/73 (39%), Positives = 39/73 (53%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+EG+ SIA+PLT+LTQK    QWSE CE  FQ                  +   +Y 
Sbjct: 899  RRFVEGFSSIASPLTKLTQKTGKFQWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYC 958

Query: 459  DASGVSLVCIDVQ 421
            DAS + L C+ +Q
Sbjct: 959  DASRIGLGCVLMQ 971


>gb|EOY31685.1| Uncharacterized protein TCM_038736 [Theobroma cacao]
          Length = 1486

 Score =  118 bits (296), Expect(2) = 8e-35
 Identities = 65/138 (47%), Positives = 89/138 (64%)
 Frame = -1

Query: 419  EKVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*K 240
            EKVIAY SRQLK HE NYPTH+LELAA++F LKI  HY+YG  C +++D+ SL+YL   K
Sbjct: 906  EKVIAYASRQLKKHETNYPTHDLELAAVVFALKIWRHYLYGERCRIFSDHKSLKYLLTHK 965

Query: 239  DXXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQS 60
            +           +K+YD+ I Y+P K N+VADALSRK  S  SL  L     P +++++S
Sbjct: 966  ELNLRQRRWLELIKDYDLVIDYHPGKANVVADALSRK--SSSSLATLRSSYFPMLLEMKS 1023

Query: 59   LVNRFVRLNISEPDRVLA 6
            L    ++LN  E   +L+
Sbjct: 1024 L---GIQLNNGEDGTLLS 1038



 Score = 55.1 bits (131), Expect(2) = 8e-35
 Identities = 29/75 (38%), Positives = 42/75 (56%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F++G+  IAAPLTRLT+K V  +W + CE RFQ               +  + F +Y 
Sbjct: 832  RRFVQGFSLIAAPLTRLTRKGVKYEWDDVCENRFQELKNRLTSAPVLTLPVSGKEFVVYS 891

Query: 459  DASGVSLVCIDVQRE 415
            DAS + L C+ +Q E
Sbjct: 892  DASKLGLGCVLMQDE 906


>gb|EOY21520.1| CCHC-type integrase, putative [Theobroma cacao]
          Length = 508

 Score =  125 bits (314), Expect(2) = 8e-35
 Identities = 66/120 (55%), Positives = 83/120 (69%)
 Frame = -1

Query: 416 KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
           KVIAY SRQLK HE+NYP H+LE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 376 KVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 435

Query: 236 XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMDVQSL 57
                      LK+YD TILY+P K N+VADALSRK  SMGSL  + I     + ++ SL
Sbjct: 436 LNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIGRRSLVREIHSL 493



 Score = 48.1 bits (113), Expect(2) = 8e-35
 Identities = 23/73 (31%), Positives = 37/73 (50%)
 Frame = -3

Query: 639 RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
           R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + ++ 
Sbjct: 301 RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTRGYTVFC 360

Query: 459 DASGVSLVCIDVQ 421
           DASGV L C+ +Q
Sbjct: 361 DASGVGLGCVLMQ 373


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  124 bits (311), Expect(2) = 1e-34
 Identities = 67/116 (57%), Positives = 82/116 (70%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HE+NYP H+LE+AAI+F LKI  HY+YG  CE+YTD+ SL+Y+F  +D
Sbjct: 862  KVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRD 921

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEECPNIMD 69
                       LK+YD TILY+P K N+VADALSRK  SMGSL  + I   P +MD
Sbjct: 922  LNLRQCRWMELLKDYDCTILYHPGKANVVADALSRK--SMGSLAHISIVR-PILMD 974



 Score = 48.9 bits (115), Expect(2) = 1e-34
 Identities = 24/73 (32%), Positives = 37/73 (50%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F++ +  I APLT+LT+K    +WS+ CE  F+                    + M+ 
Sbjct: 787  RRFVKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTMFC 846

Query: 459  DASGVSLVCIDVQ 421
            DASGV L C+ +Q
Sbjct: 847  DASGVGLGCVLMQ 859


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  117 bits (294), Expect(2) = 1e-34
 Identities = 61/110 (55%), Positives = 79/110 (71%)
 Frame = -1

Query: 416  KVIAYGSRQLKAHEKNYPTHNLELAAIIFILKI*SHYVYGVHCEVYTDYHSLQYLFN*KD 237
            KVIAY SRQLK HEKNYPTH+LELA ++F LK+  HY+YGVH +++TD+ SLQY+   K 
Sbjct: 980  KVIAYASRQLKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKA 1039

Query: 236  XXXXXXXXXXXLKNYDMTILYYPSKKNMVADALSRKAVSMGSLDMLYIEE 87
                       LK+YD++ILY+P K N+VAD+LSR  +SMGS    +IEE
Sbjct: 1040 LNLRQRRWLELLKDYDLSILYHPGKANVVADSLSR--LSMGS--TTHIEE 1085



 Score = 55.1 bits (131), Expect(2) = 1e-34
 Identities = 29/73 (39%), Positives = 39/73 (53%)
 Frame = -3

Query: 639  RQFIEGYLSIAAPLTRLTQKKVTCQWSEDCEVRFQXXXXXXXXXXXXXXXIERESFNMYF 460
            R+F+EG+ SIA+PLT+LTQK    QWSE CE  FQ                  +   +Y 
Sbjct: 905  RRFVEGFSSIASPLTKLTQKTGKFQWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYC 964

Query: 459  DASGVSLVCIDVQ 421
            DAS + L C+ +Q
Sbjct: 965  DASRIGLGCVLMQ 977