BLASTX nr result
ID: Atropa21_contig00037109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037109
(992 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 154 7e-35
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 119 2e-24
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 111 5e-22
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 109 2e-21
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 99 3e-18
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 86 6e-15
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 84 6e-14
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 72 3e-10
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 71 6e-10
ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578... 61 8e-07
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 60 2e-06
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 58 6e-06
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 154 bits (388), Expect = 7e-35
Identities = 87/295 (29%), Positives = 158/295 (53%), Gaps = 1/295 (0%)
Frame = +1
Query: 1 SRCWCCSNPKGETIHHLVAKSLSANRIGSNFSSFADINIEGLQLQQITVKMLEIXXXXXX 180
SRCWCC K ET+ HL + ++ F+ FA INI+G+ LQQ+ + +
Sbjct: 561 SRCWCCDRKKEETMTHLFPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWK-HEATPK 619
Query: 181 XXXXXXXXXXXXM*IVXXXXXXXXXXXXXXVRRCIFQIFATIKKLVQSRNPSIQNIPNRW 360
M + R + + ++K+V+S+ P I+N+ W
Sbjct: 620 LQGIYKAIPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKNMRWTW 679
Query: 361 DDLI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA 540
+I L + +++VT PP +++ NT+ A RGNPG ++ F +RD+ +LI+A
Sbjct: 680 QAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYA 739
Query: 541 *AEELGYITNAEAKTIAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNI 720
A+ +G TN EA+T+AIL A + C++++M K+I + +S+ +++I+ + W+ P I +
Sbjct: 740 KAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKV 799
Query: 721 EEIKKLEGDKQCKYSHILK*GNKLDDALTNKALDT*TINGQS-FMEMDVELRKTI 882
EEI+++ + K +HI + GN L D+L N A+++ + S F E+ ++ R+ +
Sbjct: 800 EEIREIMEKIKAKITHIFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRIL 854
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 119 bits (298), Expect = 2e-24
Identities = 71/275 (25%), Positives = 127/275 (46%)
Frame = +1
Query: 1 SRCWCCSNPKGETIHHLVAKSLSANRIGSNFSSFADINIEGLQLQQITVKMLEIXXXXXX 180
S+C+CC + ET+ HL+ + A ++ F+S+A I I GL LQQ+ K +
Sbjct: 532 SKCYCCKEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKL 591
Query: 181 XXXXXXXXXXXXM*IVXXXXXXXXXXXXXXVRRCIFQIFATIKKLVQSRNPSIQNIPNRW 360
M + +Q + +LV + P I+ + W
Sbjct: 592 SQILKAVLAVI-MWELWKRRNSYRHGKETTYNNMYYQCQLILYQLVTIKFPWIKGLTYHW 650
Query: 361 DDLI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA 540
++ +L+ P L V PS W+ NT+ AS+GNP +Y + +RD+N +L++A
Sbjct: 651 PQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYA 710
Query: 541 *AEELGYITNAEAKTIAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNI 720
A +G TN EA+ + KA + C + K+ + +S+ +Q ++ WK P + +
Sbjct: 711 EAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKL 770
Query: 721 EEIKKLEGDKQCKYSHILK*GNKLDDALTNKALDT 825
EEI ++ + H+ + N+L D + N ++T
Sbjct: 771 EEIHEIMQQIDVQVCHVYREVNQLADFIANTTINT 805
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 111 bits (277), Expect = 5e-22
Identities = 59/180 (32%), Positives = 97/180 (53%)
Frame = +1
Query: 277 RCIFQIFATIKKLVQSRNPSIQNIPNRWDDLI*LLEGNSPHLKIIKVT*HPPSRNWILYN 456
+ ++Q+ + + +S PS++ P W D++ LE P + K+ PP+ N N
Sbjct: 686 KLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNSNTRKCN 745
Query: 457 TNEASRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKTIAILKASK*CAHKQMDK 636
T+ AS+GNPG+ +Y + +RD+ NLI+A AEE+ TN EA+ +AI +A C + +
Sbjct: 746 TDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTRGFSR 805
Query: 637 IIFQKNSILVQRILIEEWKPP*NITRNIEEIKKLEGDKQCKYSHILK*GNKLDDALTNKA 816
+ + +S+L++ IL W+ P NI +E+ L HI + GN L D L N A
Sbjct: 806 VTIETDSLLLKNILQGNWEIPWNIRIIVEDTLTLMQYSTVNIEHIYREGNTLADYLANYA 865
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 109 bits (272), Expect = 2e-21
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 1/295 (0%)
Frame = +1
Query: 1 SRCWCCSNPKGETIHHLVAKSLSANRIGSNFSSFADINIEGLQLQQITVKMLEIXXXXXX 180
SRCWCC K ET+ HL +A ++ F++ A I++EGLQL Q+ +K
Sbjct: 21 SRCWCCIQSKSETMSHLFLTFYTAAKLWILFANVAGISLEGLQLSQVVIKWWTSDSCPIL 80
Query: 181 XXXXXXXXXXXXM*IVXXXXXXXXXXXXXXVRRCIFQIFATIKKLVQSRNPSIQNIPNRW 360
+ ++++ + + KL ++ P +Q+ P +W
Sbjct: 81 KPLMRVVPTVVIWNL-WKRRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKW 139
Query: 361 DDLI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA 540
D++ LE + P L + V PP + NT+ ASR NP +Y F +R+ +L++
Sbjct: 140 SDIVACLEKHKPKLYYLPVCWKPPE-GILTCNTDVASRCNPEISSYGFCLRNSVGDLVYV 198
Query: 541 *AEELGYITNAEAKTIAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNI 720
+E+ TN E + +AI + C K + K + +S ++ +IL W+ P +I I
Sbjct: 199 QGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEVPWSIVVII 258
Query: 721 EEIKKLEGDKQCKYSHILK*GNKLDDALTNKA-LDT*TINGQSFMEMDVELRKTI 882
E+I L + + H+ + GN L D L N A + I SF E+ + +K +
Sbjct: 259 EDIWGLFQECHVQIQHVYREGNTLADYLANLAFFNPNIIVYNSFAELPSQAKKIV 313
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 98.6 bits (244), Expect = 3e-18
Identities = 58/149 (38%), Positives = 85/149 (57%)
Frame = +1
Query: 379 LEGNSPHLKIIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA*AEELG 558
L N L V P + I NT+ AS+GNPG AY + +R+ N +LIH AE +G
Sbjct: 5 LGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTAENIG 64
Query: 559 YITNAEAKTIAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNIEEIKKL 738
TN EA+ AIL+A + C +K+M KII + +S+L+ +I+ E WK I +E+K+
Sbjct: 65 ITTNVEAEMRAILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWVIAEEFDELKQE 124
Query: 739 EGDKQCKYSHILK*GNKLDDALTNKALDT 825
+ K HI + GNKL D L N A+++
Sbjct: 125 MTKIEVKTQHIYREGNKLADYLANLAINS 153
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 86.3 bits (212), Expect(2) = 6e-15
Identities = 53/174 (30%), Positives = 90/174 (51%)
Frame = +1
Query: 289 QIFATIKKLVQSRNPSIQNIPNRWDDLI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNEA 468
+I I L R P ++NIP W ++ E L + PP+ NT+ A
Sbjct: 87 EITRNIHNLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCA 146
Query: 469 SRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKTIAILKASK*CAHKQMDKIIFQ 648
S+GNP A F +R+ N I+ ++ELG+ T+ EA+ IA + + C + +I +
Sbjct: 147 SKGNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILE 206
Query: 649 KNSILVQRILIEEWKPP*NITRNIEEIKKLEGDKQCKYSHILK*GNKLDDALTN 810
+S++V +IL W+ P +I+ I++I+ L D Q + SH+ + GNK+ + N
Sbjct: 207 TDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYFAN 260
Score = 21.9 bits (45), Expect(2) = 6e-15
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 149 KCWR*LVNDRLKPVLQAIPAVVICEL*KRKKIV 247
K W + +L+P+ AIP ++ E K + V
Sbjct: 41 KWWNANCSAKLRPLFNAIPGFILWESWKGRNTV 73
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 84.3 bits (207), Expect = 6e-14
Identities = 42/142 (29%), Positives = 76/142 (53%)
Frame = +1
Query: 367 LI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA*A 546
++ LL+ P L V PP WI NT+ AS+GNP + +Y F +R+ L++A
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60
Query: 547 EELGYITNAEAKTIAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNIEE 726
+ +G TN +A+++AI KA + C + ++ + +S+ ++ IL+ WK P + +E+
Sbjct: 61 QSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTPWELVERVED 120
Query: 727 IKKLEGDKQCKYSHILK*GNKL 792
I ++ HI + N+L
Sbjct: 121 ILEIMSHMDVTIKHIFREVNQL 142
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 72.4 bits (176), Expect = 3e-10
Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Frame = +1
Query: 277 RCIFQIFATIKKLVQSRNPSIQNIPNRWDDLI*LLEGNSPHLKIIKVT*HPPSRNWILYN 456
R IFQI A L+++R S +++P W ++ L + K+ KV P I
Sbjct: 3125 RLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQIKIK 3184
Query: 457 TNEASRGNPGRGAYRFSVRDENKNLIHA*AEELGYI--TNAEAKTIAILKASK*CAHKQM 630
T+ P R ++ F VRDE +++ A A+E+G + TN +A+ +AIL+A K QM
Sbjct: 3185 TD------PRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQM 3238
Query: 631 DKIIFQKNSILVQRILIEEWK 693
D+++ + +S+L I+ + WK
Sbjct: 3239 DRVVIKTDSLLTNNIVDKSWK 3259
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 71.2 bits (173), Expect = 6e-10
Identities = 36/105 (34%), Positives = 64/105 (60%)
Frame = +1
Query: 406 IIKVT*HPPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKT 585
+++V P RN + NT+ A+RGN G + F VRDE +LI+A A+ +G TN EA+
Sbjct: 1031 VMQVQEEKPGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATNMEAEA 1090
Query: 586 IAILKASK*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNI 720
+A+L+A C K + + I + +S+++++++ +WK P + I
Sbjct: 1091 LALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIPWELVERI 1135
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 1 SRCWCCSNPKGETIHHLVAKSLSANRIGSNFSSFADINIEGLQLQQITV 147
SRCWCCS + ET+ H+ + ANR+ FS+FA I IE + LQQ+ +
Sbjct: 938 SRCWCCSETEEETMTHIFLTAPIANRLWRQFSNFAGIQIESMHLQQLII 986
Score = 24.6 bits (52), Expect(2) = 3e-06
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 155 WR*LVNDRLKPVLQAIPAVVICEL*KRK 238
W+ N +LK V++A+P +++ L KR+
Sbjct: 989 WKHSDNAKLKVVMRAMPTIIMWTLWKRR 1016
>ref|XP_006358679.1| PREDICTED: uncharacterized protein LOC102578253 [Solanum tuberosum]
Length = 277
Score = 60.8 bits (146), Expect = 8e-07
Identities = 40/126 (31%), Positives = 62/126 (49%)
Frame = +1
Query: 427 PPSRNWILYNTNEASRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKTIAILKAS 606
PPS L + S G G G +RD+ + I A + LG T+ + A+L
Sbjct: 146 PPSLRVKLNSDGSFSNGQSGSGGI---IRDQEGDFIFAYSIPLGNGTSNTVEAEALLYGL 202
Query: 607 K*CAHKQMDKIIFQKNSILVQRILIEEWKPP*NITRNIEEIKKLEGDKQCKYSHILK*GN 786
+ CA K M+ I + +S+L+ + + EWK P I+ ++EI+K+ D + H K N
Sbjct: 203 QWCASKGMEMAIGETDSLLLSKTIKREWKSPWKISNQVQEIQKMIEDHKFSIVHCFKEAN 262
Query: 787 KLDDAL 804
K DAL
Sbjct: 263 KPADAL 268
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 59.7 bits (143), Expect = 2e-06
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Frame = +1
Query: 271 VRRCIFQIFATIKKLVQSRNPSIQNIPNRWDDLI*LLEGNSPHLKIIKVT*HPPSRNWIL 450
+ R + I+ K++++ PSI N P W LI E ++K+ KVT P WI
Sbjct: 242 ISRVKYAIYKDTFKMLKNSFPSI-NWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIK 300
Query: 451 YNTNEASRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKTIAILKASK*CAHKQM 630
NT+ ++ N G+ +RD+ +I A + LG +N +A+ A L
Sbjct: 301 INTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGF 360
Query: 631 DKIIFQKNSILVQRILIEEWKPP*NITRNIEEIKKLEGDKQ-CKYSHILK*GNKLDDALT 807
I+ + +S LV + + + PP N+T +E ++++ Q + HI + N + DAL+
Sbjct: 361 KNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCCHIFREANWVADALS 420
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 57.8 bits (138), Expect = 6e-06
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Frame = +1
Query: 292 IFATIKKLVQSRNPSIQNIP--NRWDDLI*LLEGNSPHLKIIKVT*HPPSRNWILYNTNE 465
IF I +++++ P NIP + W+ L L+E HLK+ V P NT+
Sbjct: 170 IFKDIMQIIKAVYP---NIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDG 226
Query: 466 ASRGNPGRGAYRFSVRDENKNLIHA*AEELGYITNAEAKTIAILKASK*CAHKQMDKIIF 645
+++ N G+ +RD LI+A A LG+ TN A+ A L + C +KII
Sbjct: 227 SAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIIL 286
Query: 646 QKNSILVQRILIEEWKPP*NITRNIEEIKKLEGDK---QCKYSHILK*GNKLDDAL 804
+ +S L+ + +I + P I++I+ + QCK HI + N D L
Sbjct: 287 EVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCK--HIYREANGTADLL 340