BLASTX nr result
ID: Atropa21_contig00036841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00036841
(764 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT39281.2| Integrase core domain containing protein [Solanum... 89 1e-15
emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera] 49 1e-08
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 44 4e-08
gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao] 44 3e-07
emb|CAN71173.1| hypothetical protein VITISV_037664 [Vitis vinifera] 45 7e-07
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 40 1e-06
emb|CAN72554.1| hypothetical protein VITISV_015792 [Vitis vinifera] 40 2e-06
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 40 3e-06
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 46 4e-06
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 46 4e-06
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera] 45 5e-06
>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
Length = 1760
Score = 89.4 bits (220), Expect = 1e-15
Identities = 85/265 (32%), Positives = 115/265 (43%), Gaps = 18/265 (6%)
Frame = -2
Query: 763 RRVIETVKTLLYQASLPSNFEVLLVTKQFTL*TG*LHRI*KTSARMKLYSKQL*TTVNP* 584
+ V+ET KTLL+QASLPS+F + L ++R+ + + K + L
Sbjct: 605 KHVVETAKTLLHQASLPSSFWSFACHQAVYL----INRLTTPNLQNKCPYEILFHEAP-- 658
Query: 583 KY*LFMLLLGSTLC--------QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLS 428
KY L + LC +NKLEP PCVYLG T CHQCFDP+ +K+YLS
Sbjct: 659 KY--ESLRVFGCLCYPWLKPYAKNKLEPKSTPCVYLGFSTKH--YCHQCFDPVKNKLYLS 714
Query: 427 RDVFFFEENYPFENIFSQSKNNSRTNISWKFVRITPNQRIITWI*ILVMIFYHQRCICLN 248
RDV F E+ YPF NIF KN T+ SW+ IC +
Sbjct: 715 RDVQFLEDTYPFHNIFLNLKNQQSTD-SWE--------------------------ICYD 747
Query: 247 SHVRPMCRRLRPL*QLRHFSISIAEYSLNISSSPSRN--------LSPTASVP--PQSIS 98
V P+ + ++ YSL +S P+R+ S T S P P +I+
Sbjct: 748 --VLPVTNKPSSFDSCHTLPDALPVYSLLPNSMPARSEGVSIASGNSQTLSSPSLPHTIT 805
Query: 97 PSASNPTTSDQINKQPSNTHSPTTS 23
P I Q N P+TS
Sbjct: 806 PPPDYTQPQPLITYQRKNHQQPSTS 830
>emb|CAN82859.1| hypothetical protein VITISV_025377 [Vitis vinifera]
Length = 1578
Score = 48.9 bits (115), Expect(2) = 1e-08
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -2
Query: 541 QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFEN 386
++KLEP PC ++G +++ + CFDP T K ++SRDV F + +PF N
Sbjct: 635 KHKLEPKAQPCTFVGY--SLSQNAYLCFDPTTQKFFISRDVIFHKGTFPFSN 684
Score = 37.4 bits (85), Expect(2) = 1e-08
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -1
Query: 734 IIPSFTSVQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
++ + S+ + +A YLINR+ T L +Q P+E LFK NY
Sbjct: 571 LMDAHMSLSYWPYAFQTVAYLINRMPTSTLNNQSPFEKLFKQMPNY 616
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 43.5 bits (101), Expect(2) = 4e-08
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 11/190 (5%)
Frame = -2
Query: 538 NKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSKNNS 359
+KL+ PCV+LG T ++C D ++++Y+SR V F E +PF + N +
Sbjct: 691 HKLDKRSKPCVFLGYSN--THNAYKCLDLSSNRVYISRHVQFIEHKFPF------ASNTT 742
Query: 358 RTNISWKFVRITPNQRIITW-------I*ILVMIFYHQRCICLNSHVRPMCRRLRPL*QL 200
T++ +Q I TW I F H P C P +L
Sbjct: 743 PTDL---------BQAISTWSSCSPALAAIQPSFFVVPTSSKSFPHQAPSCTNTGPNQEL 793
Query: 199 RHFSISIAEYSLNISSSPSRNLSPTAS--VPPQSISPSASNPTTSDQIN-KQPSNTHSPT 29
I+ S SS P+ +P ++ PP+ +S P + D N PS + SP
Sbjct: 794 ------ISSLSPTSSSPPTTASAPLSACDAPPRYDLSLSSLPVSFDSSNISSPSLSLSPP 847
Query: 28 TS-EPINTLP 2
T + N LP
Sbjct: 848 TQPQGSNPLP 857
Score = 40.8 bits (94), Expect(2) = 4e-08
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = -1
Query: 713 VQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
+++ S+A A YLINRL TP LK Q P+E+LF+ NY
Sbjct: 633 LKYWSYAFLAAAYLINRLPTPILKHQSPFESLFQHMPNY 671
>gb|EOY32308.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
Length = 678
Score = 43.5 bits (101), Expect(3) = 3e-07
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = -2
Query: 541 QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSKNN 362
++KL+P PCV+L N + ++CFD + +I++SR V F E +PF + ++++
Sbjct: 415 KHKLQPKSKPCVFLRYSINQSA--YKCFDHESQRIFVSRHVMFQEHIFPFTS--AKTQTT 470
Query: 361 SRTNISWKFVRITPNQRIITWI 296
SR + +F + NQ TW+
Sbjct: 471 SRQAMIEEFNALVKNQ---TWV 489
Score = 34.3 bits (77), Expect(3) = 3e-07
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1
Query: 713 VQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
++F S A AVY IN+L TP L + P+E LF+ NY
Sbjct: 358 LKFWSHAFQVAVYPINKLPTPLLNLKSPFEILFETPPNY 396
Score = 22.7 bits (47), Expect(3) = 3e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 585 KNIDCLCYYWVQLYVKINL 529
K CLCY W++ Y K L
Sbjct: 400 KVFGCLCYPWLKPYNKHKL 418
>emb|CAN71173.1| hypothetical protein VITISV_037664 [Vitis vinifera]
Length = 809
Score = 45.4 bits (106), Expect(2) = 7e-07
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = -2
Query: 541 QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFEN 386
++KLEP PC ++G +++ + CF+P T K++ SR V F E +PF N
Sbjct: 252 KHKLEPKAQPCTFMGY--SLSQNSYLCFEPTTRKLFTSRHVIFQERTFPFSN 301
Score = 34.7 bits (78), Expect(2) = 7e-07
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 713 VQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
+ F + YLINR+ T L +Q P+E LFK NY
Sbjct: 195 LSFWPYVFQTTAYLINRMPTSTLNNQSPFEKLFKQGPNY 233
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 40.4 bits (93), Expect(3) = 1e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = -2
Query: 541 QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSKN 365
+NKL CV+LG +N + C +P+T ++Y++R V F E +PF++ QS +
Sbjct: 758 KNKLSYRSSQCVFLGYSSNHKG--YMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSS 814
Score = 35.4 bits (80), Expect(3) = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1
Query: 710 QF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
+F +A H A++LINRL T L Q P++ LF + NY
Sbjct: 702 KFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNY 739
Score = 22.7 bits (47), Expect(3) = 1e-06
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 591 IHKNIDCLCYYWVQLYVKINLS 526
I K CLCY +++ Y K LS
Sbjct: 741 IFKIFGCLCYPYIRPYNKNKLS 762
>emb|CAN72554.1| hypothetical protein VITISV_015792 [Vitis vinifera]
Length = 668
Score = 39.7 bits (91), Expect(3) = 2e-06
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -1
Query: 713 VQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
+++ S A A YLINRL TP LK Q P+E+LF+ NY
Sbjct: 160 LKYWSHAFLTAAYLINRLPTPVLKHQIPFESLFQQLPNY 198
Score = 37.4 bits (85), Expect(3) = 2e-06
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = -2
Query: 538 NKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYP 395
+KLE H PCV++G T ++C D ++++Y+SR V F + +P
Sbjct: 218 HKLEKHSKPCVFIGYSN--THNAYKCLDLSSNRVYISRHVQFIKHQFP 263
Score = 20.4 bits (41), Expect(3) = 2e-06
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = -3
Query: 573 CLCYYWVQLY 544
CLC+ W++ Y
Sbjct: 206 CLCFXWLRPY 215
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 40.4 bits (93), Expect(3) = 3e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = -2
Query: 541 QNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSKN 365
+NKL CV+LG +N + C +P+T ++Y++R V F E +PF++ QS +
Sbjct: 567 KNKLSYRSSQCVFLGYSSNHKG--YMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSS 623
Score = 33.9 bits (76), Expect(3) = 3e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 710 QF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
+F +A H ++LINRL T L Q P++ LF + NY
Sbjct: 511 KFWLYAFHTTIFLINRLPTKVLNYQSPFQILFGKSPNY 548
Score = 22.7 bits (47), Expect(3) = 3e-06
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 591 IHKNIDCLCYYWVQLYVKINLS 526
I K CLCY +++ Y K LS
Sbjct: 550 IFKIFGCLCYPYIRPYNKNKLS 571
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 LCQNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSK 368
L +NK +P + CV+LG ++C P T K+Y+SR V F E +PF+ +
Sbjct: 695 LAKNKFDPRSLQCVFLGYHNQYKG--YRCLYPPTGKVYISRHVIFDEAQFPFKEKYHSLV 752
Query: 367 NNSRTNI--SWKFVRITP 320
+T + +W+ +TP
Sbjct: 753 PKYQTTLLQAWQHTDLTP 770
Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 725 SFTSVQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
S T ++F A A YL N L + LK+ PYETLF+ ++Y
Sbjct: 636 SHTPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDY 678
>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 LCQNKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPFENIFSQSK 368
L +NK +P + CV+LG ++C P T K+Y+SR V F E +PF+ +
Sbjct: 538 LAKNKFDPRSLQCVFLGYHNQYKG--YRCLYPPTGKVYISRHVIFDEAQFPFKEKYHSLV 595
Query: 367 NNSRTNI--SWKFVRITP 320
+T + +W+ +TP
Sbjct: 596 PKYQTTLLQAWQHTDLTP 613
Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 725 SFTSVQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
S T ++F A A YL N L + LK+ PYETLF+ ++Y
Sbjct: 479 SHTPLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDY 521
>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
Length = 1144
Score = 45.4 bits (106), Expect(2) = 5e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -2
Query: 538 NKLEPHLIPCVYLGSLTNITVICHQCFDPITSKIYLSRDVFFFEENYPF 392
+KL+P IPC++LG + T ++C DP+T+++Y+SR V F E PF
Sbjct: 653 HKLQPKSIPCIFLGY--SQTQNAYKCMDPLTNRLYISRHVTFDELXSPF 699
Score = 31.6 bits (70), Expect(2) = 5e-06
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 716 SVQF*SFACHEAVYLINRLTTPNLKDQCPYETLFKATLNY 597
S+ + A A YLINR T LK + P+E LF NY
Sbjct: 594 SLSYWPHAFQTATYLINRQPTXLLKHKSPFEVLFGQRPNY 633