BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00036811
         (949 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   198   9e-65
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                194   3e-64
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    208   3e-64
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                193   2e-63
ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g...   202   2e-62
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   197   4e-62
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        190   1e-61
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     196   2e-61
ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715...   198   3e-61
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   190   2e-60
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   195   5e-60
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   201   7e-60
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   196   1e-58
gb|ABA98724.1| retrotransposon protein, putative, unclassified [...   192   1e-58
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   182   2e-58
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   182   2e-58
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e...   192   2e-58
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g...   185   3e-58
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      201   4e-58
gb|ABA93917.1| retrotransposon protein, putative, unclassified [...   189   8e-58

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  198 bits (504), Expect(4) = 9e-65
 Identities = 95/207 (45%), Positives = 142/207 (68%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D++FTS+F++++FK  K++L  S+AYH QT+GQ++R+N+CLESYLRCMT  + + W  W 
Sbjct: 675  DRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWI 734

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN++YH+A+ M PF+ +YGY PPQ++   V           L+E++T+ + L+ 
Sbjct: 735  ALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLKA 794

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            S+  A  RMK  AD+ +T+R  EVGD V+ KLQPYR ++     SLKL   +YGP++V++
Sbjct: 795  SMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLE 854

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            K+G  AY LQLP  A IH VF    L+
Sbjct: 855  KVGAVAYRLQLPEEAAIHPVFHVSQLK 881



 Score = 58.5 bits (140), Expect(4) = 9e-65
 Identities = 37/68 (54%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -3

Query: 221  FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
            FHVSQLKK LGT+ +   +      +G    E VAVL RRMI   N A+TQ LI WSNL 
Sbjct: 875  FHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLT 934

Query: 44   PEEAT*ED 21
            P EAT ED
Sbjct: 935  PAEATWED 942



 Score = 32.7 bits (73), Expect(4) = 9e-65
 Identities = 10/31 (32%), Positives = 24/31 (77%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           +T  +V + F+ +++KL+G+P++I++DR  +
Sbjct: 647 YTVEEVVQVFMDNIHKLHGMPIAIVTDRDRV 677



 Score = 26.9 bits (58), Expect(4) = 9e-65
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           R +KYAHFI + HP+
Sbjct: 633 RLTKYAHFIALSHPY 647


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  194 bits (493), Expect(4) = 3e-64
 Identities = 93/201 (46%), Positives = 130/201 (64%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            DKIFTS  W  LF     +LH SSAYH Q++GQ++R+N+CLE YLRC        W+ W 
Sbjct: 1244 DKIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWL 1303

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             LAE+ YNS+YHS+L   PF+V+YGY P            +  +  WL++R+ M +++Q+
Sbjct: 1304 HLAEYWYNSTYHSSLGTTPFEVLYGYPPNHFGIS-SRDCAIPELSVWLRDRKFMQQLVQQ 1362

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A  +MK  ADK ++ R F +GDWV+ KLQPY  SSVA   + KL+  +YGP+QVI 
Sbjct: 1363 HLHRAQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVID 1422

Query: 280  KIGNAAYELQLPPSAKIHLVF 218
            K+G  AY+LQLP ++ +H VF
Sbjct: 1423 KLGTVAYKLQLPETSSVHPVF 1443



 Score = 46.2 bits (108), Expect(4) = 3e-64
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = -3

Query: 125  VAVLGRRMIKGGNKAITQVLIRWSNLLPEEAT*EDYNLMKS 3
            +A+L +R+ K GN  ITQVLI WS+ +PE+AT ED   +K+
Sbjct: 1473 LAILDQRLAKKGNSVITQVLIHWSHTVPEQATWEDLEDLKT 1513



 Score = 43.1 bits (100), Expect(4) = 3e-64
 Identities = 17/31 (54%), Positives = 25/31 (80%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            FTA  VA+ +++H+YKL+GLP +I+SDR  I
Sbjct: 1216 FTAIDVAQAYMFHIYKLHGLPQTIVSDRDKI 1246



 Score = 31.2 bits (69), Expect(4) = 3e-64
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            RFSKYAHF+ + HPF
Sbjct: 1202 RFSKYAHFVALKHPF 1216


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  208 bits (530), Expect(4) = 3e-64
 Identities = 104/207 (50%), Positives = 136/207 (65%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            DKIFTS+ W  LF     +LHLSSAYH Q++GQ++R+N+CLE +LRC        W  W 
Sbjct: 600  DKIFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWL 659

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             LAEF YNSSYHSALN  PF+V+YGY P        A   +  +D WL ER  M ++L++
Sbjct: 660  HLAEFWYNSSYHSALNKTPFEVLYGYPPSHFGIRADA-CVISDLDSWLSERHLMTQLLRQ 718

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A   MK QADK ++ RSF+VGDWVF KLQPY  SSVA   + KLS  ++GPYQ++ 
Sbjct: 719  HLNRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILS 778

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            K+G+ AY+LQLP  + +H VF    L+
Sbjct: 779  KVGSVAYKLQLPADSMVHPVFHVSQLK 805



 Score = 39.7 bits (91), Expect(4) = 3e-64
 Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = -3

Query: 221  FHVSQLKKLGT----NIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWS 54
            FHVSQLK  GT    + I +  P I      P    V +L  R+ K GNK + Q+L+ WS
Sbjct: 799  FHVSQLK--GTQNFKHSIQSQLPNITDHIQYP----VQILDTRIQKKGNKVVRQILVCWS 852

Query: 53   NLLPEEAT*EDYNLMK 6
            NL   EAT ED   +K
Sbjct: 853  NLPAVEATWEDEEELK 868



 Score = 38.1 bits (87), Expect(4) = 3e-64
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           F+A  VA+ F+ +VYKL+GLP  IISDR  I
Sbjct: 572 FSALDVAKVFMLNVYKLHGLPQIIISDRDKI 602



 Score = 28.5 bits (62), Expect(4) = 3e-64
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           +FSKYAHF+ + HPF
Sbjct: 558 KFSKYAHFMPLSHPF 572


>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score =  193 bits (491), Expect(4) = 2e-63
 Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
 Frame = -1

Query: 820 DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
           DK+FTS  W  LF+    +LH SSAYH Q++ Q++R+N+CLE YLRC        W  W 
Sbjct: 279 DKVFTSQLWEHLFEGAGTKLHFSSAYHPQSDAQTERVNQCLEIYLRCFVHSVPTKWAAWL 338

Query: 640 SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQR-KVDSVD*WLKERQTMAKVLQ 464
            LAE+ YN+S+HS++   PF+V+YG+ P    F + +Q   +  +  WLKER+ M  ++Q
Sbjct: 339 HLAEYWYNTSFHSSVQATPFEVLYGHSPSH--FGIGSQDCAIPDLAQWLKERRLMQNLVQ 396

Query: 463 KSLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVI 284
           + L +A  +MK  ADK ++ RSFEVGDWV+ KLQPY  +SVA   + KL+  ++GPYQV 
Sbjct: 397 QHLHRAQQQMKHFADKKRSFRSFEVGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVT 456

Query: 283 KKIGNAAYELQLPPSAKIHLVFMSHNLRS 197
            KIG  AY+LQLP S  IH VF    L+S
Sbjct: 457 AKIGTVAYQLQLPSSTSIHPVFHVSQLKS 485



 Score = 48.1 bits (113), Expect(4) = 2e-63
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = -3

Query: 221 FHVSQLKKLGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLLP 42
           FHVSQLK            L  +T   P+   + +L RR+ K GN A+ QVLI+WS  +P
Sbjct: 478 FHVSQLKSAIGFTGPVQHQLPAST--APLQVPLRILDRRLTKRGNSAVAQVLIQWSASVP 535

Query: 41  EEAT*EDYNLMKS 3
           E+AT ED + ++S
Sbjct: 536 EDATWEDLDDLRS 548



 Score = 41.6 bits (96), Expect(4) = 2e-63
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA  VA+ F+ H++KL+GLPL IISDR  +
Sbjct: 251 FTALSVAKLFMKHIFKLHGLPLVIISDRDKV 281



 Score = 29.3 bits (64), Expect(4) = 2e-63
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPFYSSS 889
           +FSKYAHF+ + HPF + S
Sbjct: 237 KFSKYAHFLPLSHPFTALS 255


>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
           gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score =  202 bits (513), Expect(4) = 2e-62
 Identities = 100/208 (48%), Positives = 138/208 (66%)
 Frame = -1

Query: 820 DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
           DKIFTS  W  LF     +LHLS+AYH Q++GQ++R+N+CLE YLRC T      W  W 
Sbjct: 61  DKIFTSQLWEQLFTRSGTQLHLSTAYHPQSDGQTERVNQCLEIYLRCFTHATPSKWAVWL 120

Query: 640 SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            LAEF YN+++HSALN  PF+V+YG+ PP+          +  +  WLKER+ M  ++Q+
Sbjct: 121 HLAEFWYNTAFHSALNTSPFEVLYGH-PPRYFGIHSEDCAIPELQVWLKERRLMHSLIQQ 179

Query: 460 SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            L +A   MK  ADK ++ RSFE+GDWV+ KLQPY  SSVA   + KL+  ++GP+QVI+
Sbjct: 180 HLNRAQQHMKNMADKKRSFRSFELGDWVYIKLQPYVQSSVAARANHKLAFRYFGPFQVIQ 239

Query: 280 KIGNAAYELQLPPSAKIHLVFMSHNLRS 197
           K G+ AY+LQLP ++ IH VF    L++
Sbjct: 240 KFGSVAYKLQLPTTSSIHPVFHVSQLKA 267



 Score = 41.2 bits (95), Expect(4) = 2e-62
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA  VA+ F+ ++YKL+GLP +IISDR  I
Sbjct: 33  FTAIDVAKTFMLNIYKLHGLPQTIISDRDKI 63



 Score = 38.5 bits (88), Expect(4) = 2e-62
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -3

Query: 125 VAVLGRRMIKGGNKAITQVLIRWSNLLPEEAT*ED 21
           + +L  R+IK GN  ++QVLI+WS+   E+AT ED
Sbjct: 290 IMLLDNRLIKKGNTTVSQVLIQWSDTAVEDATWED 324



 Score = 27.3 bits (59), Expect(4) = 2e-62
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           +FSKY HF+ + HPF
Sbjct: 19  KFSKYGHFLPLSHPF 33


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  197 bits (501), Expect(4) = 4e-62
 Identities = 97/201 (48%), Positives = 135/201 (67%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D  FTS+FW++LFKL    L  SSAYH QT+GQ++ +N+ +E YLRC +  K K W +W 
Sbjct: 1186 DPTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWL 1245

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             LAE+ YN++ H++  + PF+ VYGY PP+L        ++  V+  LK R  + ++L+ 
Sbjct: 1246 PLAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRT 1305

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            +L+ A +RMKK AD   T RSF +GD V+ +LQPY+  SV   R+LKLS  FYGPY+V++
Sbjct: 1306 NLQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLE 1365

Query: 280  KIGNAAYELQLPPSAKIHLVF 218
            KIG  AY L+LPP AKIH VF
Sbjct: 1366 KIGTVAYRLELPPEAKIHPVF 1386



 Score = 44.7 bits (104), Expect(4) = 4e-62
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = -3

Query: 221  FHVSQLK-KLGTN--IIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSN 51
            FHVS LK KLG    ++VT+ P     +GV   E   +L RR+ K  N A+T+VL++W  
Sbjct: 1386 FHVSCLKEKLGERHQLVVTLPPX--DKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKG 1443

Query: 50   LLPEEAT*EDYNLM 9
            L  +EA+  +Y+ +
Sbjct: 1444 LGEDEASWVEYSTL 1457



 Score = 36.2 bits (82), Expect(4) = 4e-62
 Identities = 14/28 (50%), Positives = 25/28 (89%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDR 819
            +TA+++A+ FL +++KL+GLP SI++DR
Sbjct: 1158 YTASKIAQVFLANIFKLHGLPNSIVTDR 1185



 Score = 29.6 bits (65), Expect(4) = 4e-62
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPFYSSSGGQ 880
            R SKYAHFI I HP+ +S   Q
Sbjct: 1144 RLSKYAHFIPISHPYTASKIAQ 1165


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  190 bits (482), Expect(4) = 1e-61
 Identities = 88/207 (42%), Positives = 139/207 (67%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTS  ++++FK +K+ L  S++YH QT+GQ++R+N+CLESYLR MT  +   WH W 
Sbjct: 1306 DRIFTSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWL 1365

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN++YH+++ M PFQ +YGY PPQ+    V     +     ++++  + + L+ 
Sbjct: 1366 ALAEWWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKY 1425

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            SL +A  R+K  AD+ +++R+  VGD V+ KLQPYR ++     SLKL   FYGP+++++
Sbjct: 1426 SLTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIME 1485

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            K+G  AY+LQLP  + IH VF    L+
Sbjct: 1486 KVGRVAYKLQLPEGSNIHPVFHVSQLK 1512



 Score = 56.6 bits (135), Expect(4) = 1e-61
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221  FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
            FHVSQLKK +G+  +   +      +G    E VAVL RRMI  G  A+TQ L+ W NL 
Sbjct: 1506 FHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLS 1565

Query: 44   PEEAT*EDYNLMKS 3
            P EAT ED ++++S
Sbjct: 1566 PSEATWEDASMIQS 1579



 Score = 33.1 bits (74), Expect(4) = 1e-61
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            +T  QV   F+ ++++L+G+P++II+DR  I
Sbjct: 1278 YTVEQVVELFMNNIHRLHGMPMAIITDRDRI 1308



 Score = 26.2 bits (56), Expect(4) = 1e-61
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            R +KYAHFI + HP+
Sbjct: 1264 RLTKYAHFIAMAHPY 1278


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  196 bits (497), Expect(4) = 2e-61
 Identities = 95/207 (45%), Positives = 142/207 (68%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTSS ++++FK +K++L  S+AYH Q +GQ++R+N+CLESYLR MT  +   W+ W 
Sbjct: 1195 DRIFTSSLFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWL 1254

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN+++H+A+ M PF+ +YGY PPQ+    V     +     ++E++ +   L+ 
Sbjct: 1255 ALAEWWYNTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKN 1314

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            SL  A +RMK  ADK +T+R+ EVGD V+ KL+PYR S+     SLKL   FYGP++V++
Sbjct: 1315 SLADAQHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQ 1374

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            KIG  AY+LQLP  A+IH VF    L+
Sbjct: 1375 KIGQLAYKLQLPDDAQIHPVFHVSQLK 1401



 Score = 51.2 bits (121), Expect(4) = 2e-61
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221  FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
            FHVSQLKK LG + I   +      +G    E +AVL RRM+     A+TQ LI W NL 
Sbjct: 1395 FHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLS 1454

Query: 44   PEEAT*EDYNLMKS 3
            P EAT ED +++++
Sbjct: 1455 PAEATWEDASVIQA 1468



 Score = 31.6 bits (70), Expect(4) = 2e-61
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            +   QV   F+ +++KL+G+P+ II+DR  I
Sbjct: 1167 YDVEQVVEAFMNNIHKLHGMPMVIITDRDRI 1197



 Score = 26.6 bits (57), Expect(4) = 2e-61
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            R +KYAHFI + HP+
Sbjct: 1153 RLTKYAHFIALAHPY 1167


>ref|XP_006651601.1| PREDICTED: uncharacterized protein LOC102715003 [Oryza brachyantha]
          Length = 1415

 Score =  198 bits (504), Expect(4) = 3e-61
 Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            DKIFTS+ W  LF L    LHLSSAYH QT+GQ++R+N+CLE YLRC        W  W 
Sbjct: 1085 DKIFTSNLWDQLFSLAGTSLHLSSAYHPQTDGQTERVNQCLEIYLRCFVHASPSKWADWL 1144

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQR-KVDSVD*WLKERQTMAKVLQ 464
             LAEF YN  YH+AL   PF+V+YG+ P    F + AQ   V  +D WLK+R  M +++Q
Sbjct: 1145 HLAEFWYNCCYHTALQKSPFEVLYGHSPNH--FGITAQDCSVPDLDTWLKDRTLMQQLVQ 1202

Query: 463  KSLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVI 284
            + L +A  +MK  ADK ++ R F VGDWV+ K+QPY  SSVAT  + KL+  ++GP+Q++
Sbjct: 1203 QHLHRAQQQMKHLADKGRSFREFAVGDWVYLKIQPYVQSSVATGANNKLAFKYFGPFQIV 1262

Query: 283  KKIGNAAYELQLPPSAKIHLVFMSHNLRS 197
             ++G+ AY+L LP    IH V     L+S
Sbjct: 1263 SRVGSVAYKLNLPADCSIHPVIHVSQLKS 1291



 Score = 41.6 bits (96), Expect(4) = 3e-61
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            F A  VA+ F+ HVYKL+GLP +IISDR  I
Sbjct: 1057 FNALDVAKVFMSHVYKLHGLPTTIISDRDKI 1087



 Score = 37.0 bits (84), Expect(4) = 3e-61
 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = -3

Query: 218  HVSQLKKLGTNIIVTIDPLICTTEGVPMIEHVA-----VLGRRMIKGGNKAITQVLIRWS 54
            HVSQLK      +         T  +P I+ V      VL  R+ + GN   TQ+LI WS
Sbjct: 1285 HVSQLKSANGQQVFP-------TGSLPKIDVVPPYPLRVLDFRLSRKGNNTQTQLLIHWS 1337

Query: 53   NLLPEEAT*ED 21
            N   E+AT ED
Sbjct: 1338 NATVEDATWED 1348



 Score = 27.7 bits (60), Expect(4) = 3e-61
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            +FSKY HFI + HPF
Sbjct: 1043 KFSKYGHFIPLAHPF 1057


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  190 bits (483), Expect(4) = 2e-60
 Identities = 90/207 (43%), Positives = 143/207 (69%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D++FTS+F++++FK  K++L  S+A+H QT+GQ++R+N+CLESYLR MT  + + W  W 
Sbjct: 1331 DRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWL 1390

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN++YH+++ M PFQ +YGY PPQ+T   +     +     L+++  + + L+ 
Sbjct: 1391 ALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKS 1450

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            S+ +A  R+K  ADK +++R+ E+GD V+ KLQPYR  ++    SLKL   +YGP++VI+
Sbjct: 1451 SIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIE 1510

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            K+G  AY+LQLP  A IH VF    L+
Sbjct: 1511 KMGAVAYKLQLPDGAGIHPVFHVSQLK 1537



 Score = 52.4 bits (124), Expect(4) = 2e-60
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221  FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
            FHVSQLKK LG   I   +      +G    E  AVL RRMI   N+ +TQ LI W NL 
Sbjct: 1531 FHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLT 1590

Query: 44   PEEAT*EDYNLMKS 3
            P EAT ED + +++
Sbjct: 1591 PAEATWEDASYIQA 1604



 Score = 32.7 bits (73), Expect(4) = 2e-60
 Identities = 11/31 (35%), Positives = 23/31 (74%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            +T  QV + F+ +++KL+G+P+ I++DR  +
Sbjct: 1303 YTVEQVVQIFMDNIHKLHGMPMVIVTDRDRV 1333



 Score = 26.2 bits (56), Expect(4) = 2e-60
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            R +KYAHF+ + HP+
Sbjct: 1289 RLTKYAHFLALSHPY 1303


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  195 bits (496), Expect(4) = 5e-60
 Identities = 96/208 (46%), Positives = 132/208 (63%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            DKIFTS FW  LF     +LH+SSAYH Q++GQ++R+N+CLE YLRC        W  W 
Sbjct: 1260 DKIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWL 1319

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             LAEF YN+S+HS LN  PF+V+YGY P      L    ++  +  W  ER+ M ++LQ+
Sbjct: 1320 YLAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIGL-DDCQIADLHEWHTERKFMQQLLQQ 1378

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A  +MK QADK ++ R F VGDWV+ KLQPY  + VA     KL+  +YGP+QV+ 
Sbjct: 1379 HLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMS 1438

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLRS 197
            ++G  AY +QLP ++ IH VF    L++
Sbjct: 1439 RVGTVAYHIQLPATSSIHPVFHVSQLKA 1466



 Score = 39.3 bits (90), Expect(4) = 5e-60
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            F A  VA++F+ ++YKL+GLP +IISDR  I
Sbjct: 1232 FNAGGVAQEFMKNIYKLHGLPRAIISDRDKI 1262



 Score = 37.0 bits (84), Expect(4) = 5e-60
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = -3

Query: 221  FHVSQLKKLGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLLP 42
            FHVSQLK         +   + T+ G   +     L +R++K GN+++ Q+L  W +  P
Sbjct: 1459 FHVSQLKA-AVGFSKKVQDELPTSLGALQVPF-QFLDKRLVKKGNRSVLQLLTHWYHSSP 1516

Query: 41   EEAT*ED 21
             E+T ED
Sbjct: 1517 SESTWED 1523



 Score = 28.9 bits (63), Expect(4) = 5e-60
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPFYSSSGG 883
            +FSKY+HFI + HPF  ++GG
Sbjct: 1218 KFSKYSHFIPLSHPF--NAGG 1236


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  201 bits (511), Expect(4) = 7e-60
 Identities = 94/200 (47%), Positives = 136/200 (68%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTS+ W  LF+L   +L +SS+YH QT+GQ++R+N+CLE++LRC        W +W 
Sbjct: 1301 DRIFTSTLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWL 1360

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN+S+HSAL   PF+V+YG++P        A  + D +  WL ER+ M  +++ 
Sbjct: 1361 ALAEYWYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHEREKMQALIRD 1420

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A  RMK+QAD+++++RSF VGDWV+ KLQP+   SV T  + KLS  FYGP+QV+ 
Sbjct: 1421 HLLRAQTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLD 1480

Query: 280  KIGNAAYELQLPPSAKIHLV 221
            K+G  AY L LP S+ IH V
Sbjct: 1481 KVGTVAYRLDLPSSSLIHPV 1500



 Score = 37.4 bits (85), Expect(4) = 7e-60
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            F+A  VA  ++ H+++L+GLP S+ISDR  I
Sbjct: 1273 FSALDVAEAYMQHIHRLHGLPQSLISDRDRI 1303



 Score = 33.9 bits (76), Expect(4) = 7e-60
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 218  HVSQLKKLGTNIIVTIDPL-ICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLLP 42
            HVSQLKK          PL +        +    +L RR I+ G+K + Q+ +RW+   P
Sbjct: 1502 HVSQLKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRRFIRKGSKLVEQIQVRWTGDAP 1561

Query: 41   EEAT*ED 21
               T E+
Sbjct: 1562 AATTWEN 1568



 Score = 27.7 bits (60), Expect(4) = 7e-60
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            +FSKY+HF+ + HPF
Sbjct: 1259 KFSKYSHFVPLTHPF 1273


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  196 bits (497), Expect(4) = 1e-58
 Identities = 90/207 (43%), Positives = 141/207 (68%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTS  W++LFK +K++L  S+AYH QT+GQ++R+N+C+ESYLRCM   + K W  W 
Sbjct: 1056 DRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWL 1115

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             LAE+ YN+++H+AL + PFQ +YG+ PP +    +   + +    +L+E+Q M + L++
Sbjct: 1116 PLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKE 1175

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            +L +A  RMKK AD  +++R   VGD V+ K+QPYR ++    ++LKL+  FYGP++V++
Sbjct: 1176 NLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQ 1235

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            ++G  AY LQLP    IH VF    L+
Sbjct: 1236 RVGKVAYRLQLPEGVGIHPVFHISQLK 1262



 Score = 42.7 bits (99), Expect(4) = 1e-58
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221  FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
            FH+SQLK+  G N I + +  +   +G    E   V   R +   +  +TQ L++W+NL 
Sbjct: 1256 FHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLP 1315

Query: 44   PEEAT*EDYNLMKS 3
            PE+A+ ED + +KS
Sbjct: 1316 PEDASWEDASFIKS 1329



 Score = 32.7 bits (73), Expect(4) = 1e-58
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            ++   VA+ F+ +++KL+G P++I+SDR  I
Sbjct: 1028 YSVQLVAQAFIDNIFKLHGFPIAIVSDRDRI 1058



 Score = 25.0 bits (53), Expect(4) = 1e-58
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            RF+KYAH + + HP+
Sbjct: 1014 RFTKYAHSVPLSHPY 1028


>gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1269

 Score =  192 bits (489), Expect(4) = 1e-58
 Identities = 91/207 (43%), Positives = 137/207 (66%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTS+ W++LF+L   +L +SSAYH QT+GQ++R+N+CLE++LRC      K W++W 
Sbjct: 943  DRIFTSALWKELFQLADTQLQMSSAYHPQTDGQTERVNQCLETFLRCFVHACPKRWYRWL 1002

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAEF YN+++HSAL+  PF+V+YG+ P         +  V  +  WLKER+ +  + ++
Sbjct: 1003 ALAEFWYNTAFHSALDKSPFEVLYGHSPRHFGVFDRFECAVPDLQDWLKEREVITSLPRQ 1062

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A   MK QADK ++DR F VGDWVF K QP+   S+    + KL+  ++GP+Q++ 
Sbjct: 1063 HLLRAQQSMKLQADKKRSDREFAVGDWVFLKAQPHAQFSMTGRSNHKLAFRYFGPFQILA 1122

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            +IG+ AY LQLP +  IH V     LR
Sbjct: 1123 RIGSVAYRLQLPTTCAIHPVVHVSQLR 1149



 Score = 37.7 bits (86), Expect(4) = 1e-58
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = -3

Query: 218  HVSQLKKLGT---NIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNL 48
            HVSQL++  +   +  +   P +   E +P    V +L RR +K G  A+ Q+ IRWS  
Sbjct: 1144 HVSQLRQASSPAPDSSIQDLPALTEDEALP----VQILARRAVKKGAGAVEQLKIRWSGQ 1199

Query: 47   LPEEAT*ED 21
               EAT ED
Sbjct: 1200 TSAEATWED 1208



 Score = 36.2 bits (82), Expect(4) = 1e-58
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            FTA  VA  +L +VYK++GLP  +ISDR  I
Sbjct: 915  FTAFDVALAYLNNVYKMHGLPQHLISDRDRI 945



 Score = 29.6 bits (65), Expect(4) = 1e-58
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           +FSKYAHF+ + HPF
Sbjct: 901 KFSKYAHFVALAHPF 915


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  182 bits (461), Expect(4) = 2e-58
 Identities = 88/207 (42%), Positives = 141/207 (68%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTSS W+++F+   ++LH SSAYH QT+GQS+R+N+CLE+YLRCMTS K + W    
Sbjct: 586  DRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALL 645

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
              AE+ YN+++H++L M P+Q ++G +PP L   L+    ++      + +  + + ++ 
Sbjct: 646  PHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKS 705

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L KA  RMK  AD+++ +R+ EVGD V+ K+QPYR +S+    SLKL   +YGP++V++
Sbjct: 706  HLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLE 765

Query: 280  KIGNAAYELQLPPSAKIHLVFMSHNLR 200
            +IG+ AY+L LP +++IH VF    L+
Sbjct: 766  RIGSVAYKLLLPVTSQIHHVFHVSQLK 792



 Score = 43.9 bits (102), Expect(4) = 2e-58
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -3

Query: 221 FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
           FHVSQLKK LG+  +      +   EG  +   +AVL RR+I   N+ + Q  I W+NL 
Sbjct: 786 FHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLP 845

Query: 44  PEEAT*ED 21
              AT ED
Sbjct: 846 ESAATWED 853



 Score = 40.0 bits (92), Expect(4) = 2e-58
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA Q+   FL H YKL+GLP  I+SDR  I
Sbjct: 558 FTADQILTQFLEHFYKLHGLPTVIVSDRDRI 588



 Score = 29.6 bits (65), Expect(4) = 2e-58
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           RF+KYAHFI + HPF
Sbjct: 544 RFTKYAHFIPLSHPF 558


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  182 bits (461), Expect(4) = 2e-58
 Identities = 88/207 (42%), Positives = 141/207 (68%)
 Frame = -1

Query: 820 DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
           D+IFTSS W+++F+   ++LH SSAYH QT+GQS+R+N+CLE+YLRCMTS K + W    
Sbjct: 365 DRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALL 424

Query: 640 SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
             AE+ YN+++H++L M P+Q ++G +PP L   L+    ++      + +  + + ++ 
Sbjct: 425 PHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKS 484

Query: 460 SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
            L KA  RMK  AD+++ +R+ EVGD V+ K+QPYR +S+    SLKL   +YGP++V++
Sbjct: 485 HLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLE 544

Query: 280 KIGNAAYELQLPPSAKIHLVFMSHNLR 200
           +IG+ AY+L LP +++IH VF    L+
Sbjct: 545 RIGSVAYKLLLPVTSQIHHVFHVSQLK 571



 Score = 43.9 bits (102), Expect(4) = 2e-58
 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -3

Query: 221 FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
           FHVSQLKK LG+  +      +   EG  +   +AVL RR+I   N+ + Q  I W+NL 
Sbjct: 565 FHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLP 624

Query: 44  PEEAT*ED 21
              AT ED
Sbjct: 625 ESAATWED 632



 Score = 40.0 bits (92), Expect(4) = 2e-58
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA Q+   FL H YKL+GLP  I+SDR  I
Sbjct: 337 FTADQILTQFLEHFYKLHGLPTVIVSDRDRI 367



 Score = 29.6 bits (65), Expect(4) = 2e-58
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           RF+KYAHFI + HPF
Sbjct: 323 RFTKYAHFIPLSHPF 337


>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 335

 Score =  192 bits (489), Expect(4) = 2e-58
 Identities = 91/207 (43%), Positives = 141/207 (68%)
 Frame = -1

Query: 820 DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
           D+IFTS  ++++FK+LK+ L LS+AYH QT+ Q++R+N+CLE+YLR MT  + + W  W 
Sbjct: 71  DRIFTSHLFQEIFKMLKVTLRLSTAYHPQTDRQTERVNQCLEAYLRSMTFQEPREWMNWL 130

Query: 640 SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
           +LAE+ YN++YH++L + PFQ +YGY PPQ+    +     +     +++++ M + L+ 
Sbjct: 131 TLAEWWYNTTYHTSLKVTPFQALYGYPPPQVGELSIPCNVSEEARITVEQKEQMLEQLKS 190

Query: 460 SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
           +L  A +RMK  ADK +T+R F+VGD V+ K+QPYR ++     SLKL   FYGP++V++
Sbjct: 191 NLHNAQDRMKHYADKSRTERQFQVGDMVYLKMQPYRLTAFGLRGSLKLRSKFYGPFRVLE 250

Query: 280 KIGNAAYELQLPPSAKIHLVFMSHNLR 200
           K+G  AY LQLP    IH VF  + L+
Sbjct: 251 KLGTVAYRLQLPEHTLIHPVFHVNQLK 277



 Score = 47.4 bits (111), Expect(4) = 2e-58
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = -3

Query: 221 FHVSQLKK-LGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLL 45
           FHV+QLKK LG++ +      +    G    E V VL RR++   N+ + Q+LI+W NL 
Sbjct: 271 FHVNQLKKHLGSHAVPLTGLPLVGENGKIKTEPVVVLDRRIVPRRNEPVAQLLIQWLNLG 330

Query: 44  PEEAT 30
           PE+AT
Sbjct: 331 PEDAT 335



 Score = 29.6 bits (65), Expect(4) = 2e-58
 Identities = 10/31 (32%), Positives = 22/31 (70%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           ++   V + F+ ++ KL+G+P++I++DR  I
Sbjct: 43  YSVQHVVQVFMDNILKLHGMPITIVTDRDRI 73



 Score = 25.4 bits (54), Expect(4) = 2e-58
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           R +KYAHF+ + HP+
Sbjct: 29  RLTKYAHFLSLAHPY 43


>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
            gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
            sativa Japonica Group]
          Length = 783

 Score =  185 bits (469), Expect(4) = 3e-58
 Identities = 89/203 (43%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            DKIFTS  W  LF     +LH SSAYH Q++GQ++R N+CLE YL+C        W  W 
Sbjct: 429  DKIFTSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWL 488

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD--*WLKERQTMAKVL 467
             LAE+ YN+SYHS ++  PF+ +YGY P      +   R  D+ +   W+++R+ M +++
Sbjct: 489  HLAEYWYNNSYHSTIDRTPFEALYGYPPRHFGISI---RDCDNSELITWMQDRKLMQQLV 545

Query: 466  QKSLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQV 287
            Q+ L +A  +MK  ADK ++ R F+VG+WV+ KLQPY  SSVA   + KL+  ++GP+Q+
Sbjct: 546  QQHLHRAQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYFGPFQI 605

Query: 286  IKKIGNAAYELQLPPSAKIHLVF 218
            ++K+G  AY+LQLP ++ IH VF
Sbjct: 606  LEKLGTVAYKLQLPATSSIHPVF 628



 Score = 41.2 bits (95), Expect(4) = 3e-58
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = -3

Query: 221 FHVSQLKKLGTNIIVTIDPLICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLLP 42
           FHVS LK+          PL  T   V     +A+L  R+ K GN  + QVL  WS+ +P
Sbjct: 628 FHVSLLKEAKGFQPSVHTPLSPTYSAVQY--PIALLDHRLTKKGNHTVHQVLTHWSDTIP 685

Query: 41  EEAT*EDYNLMKS 3
            +AT ED + +K+
Sbjct: 686 AQATWEDLHDLKA 698



 Score = 39.7 bits (91), Expect(4) = 3e-58
 Identities = 19/31 (61%), Positives = 23/31 (74%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA  VA+ F+ +VYKL+GLP  IISDR  I
Sbjct: 401 FTAIDVAKAFMSNVYKLHGLPQIIISDRDKI 431



 Score = 28.9 bits (63), Expect(4) = 3e-58
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           +FSKY+HFI + HPF
Sbjct: 387 KFSKYSHFIPLRHPF 401


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  201 bits (512), Expect(3) = 4e-58
 Identities = 98/210 (46%), Positives = 143/210 (68%), Gaps = 3/210 (1%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTSSFW+ LF++    L +SS+YH Q++GQ++RLN+CLE++LRC        W  W 
Sbjct: 1262 DRIFTSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWL 1321

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQ---LTFELVAQRKVDSVD*WLKERQTMAKV 470
            S+AE+ YN++ HS L   PF+V+YG+ P     L   +V Q ++++   WLKER+ M KV
Sbjct: 1322 SVAEYWYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVVPQPELET---WLKERELMTKV 1378

Query: 469  LQKSLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQ 290
            ++  L +A +RMK+QADK +++R F VGDWV+ KLQPY  SSVAT  + KLS  F+GP+Q
Sbjct: 1379 IKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQ 1438

Query: 289  VIKKIGNAAYELQLPPSAKIHLVFMSHNLR 200
            +  ++G+ AY L LP S+ IH +F    L+
Sbjct: 1439 ITDRLGSVAYRLALPASSSIHPIFHVSQLK 1468



 Score = 45.4 bits (106), Expect(3) = 4e-58
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -3

Query: 902  FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
            FTAA+VAR FL +VYKL+GLP++IISDR  I
Sbjct: 1234 FTAAKVARVFLDNVYKLHGLPVNIISDRDRI 1264



 Score = 26.6 bits (57), Expect(3) = 4e-58
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 945  RFSKYAHFILIHHPF 901
            +FSKY HF+ + HPF
Sbjct: 1220 KFSKYGHFLPLLHPF 1234


>gb|ABA93917.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1091

 Score =  189 bits (479), Expect(4) = 8e-58
 Identities = 90/200 (45%), Positives = 131/200 (65%)
 Frame = -1

Query: 820  DKIFTSSFWRDLFKLLKIELHLSSAYHIQTNGQSDRLNRCLESYLRCMTSHKHKAWHQWW 641
            D+IFTS+ W  LF L   +L +SS+YH QT+GQ++R+N+CLE++LRC        W +W 
Sbjct: 755  DRIFTSTLWTTLFCLAGTQLQMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSHWTKWL 814

Query: 640  SLAEFLYNSSYHSALNMPPFQVVYGYEPPQLTFELVAQRKVDSVD*WLKERQTMAKVLQK 461
            +LAE+ YN+S+HS+L M PF+V+YG++P        A      +  WL +R  M  ++++
Sbjct: 815  ALAEYWYNTSFHSSLGMTPFEVLYGHKPRYFGLSTNAACLSPELTDWLHDRAKMQNLIRE 874

Query: 460  SLRKA*NRMKKQADKYKTDRSFEVGDWVFFKLQPYR*SSVATMRSLKLSLNFYGPYQVIK 281
             L +A  RMK QADK +++RSF VGDWV+ KLQP+   SV T  + KLS  FYGP+Q++ 
Sbjct: 875  HLLRAQTRMKMQADKGRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQILA 934

Query: 280  KIGNAAYELQLPPSAKIHLV 221
            +IG   Y+  LP S+ IH V
Sbjct: 935  RIGTMTYKFALPESSLIHPV 954



 Score = 40.8 bits (94), Expect(4) = 8e-58
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = -3

Query: 902 FTAAQVARDFLYHVYKLYGLPLSIISDRQNI 810
           FTA  VA  F+ H+++L+GLP SIISDR  I
Sbjct: 727 FTALDVAEAFMQHIHRLHGLPQSIISDRDRI 757



 Score = 35.8 bits (81), Expect(4) = 8e-58
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 218  HVSQLKKLGTNIIVTIDPL-ICTTEGVPMIEHVAVLGRRMIKGGNKAITQVLIRWSNLLP 42
            HVSQLKK         D L +   +   ++    +L RR+I+ G+K +  V +RWS   P
Sbjct: 956  HVSQLKKALAPGESFQDSLPVLNPDDASIVVPAEILDRRLIRKGSKQVLLVQVRWSGNDP 1015

Query: 41   EEAT*EDYN 15
               T E+Y+
Sbjct: 1016 TMVTCENYH 1024



 Score = 27.7 bits (60), Expect(4) = 8e-58
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 945 RFSKYAHFILIHHPF 901
           +FSKY+HF+ + HPF
Sbjct: 713 KFSKYSHFVPLAHPF 727