BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00036737
         (677 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi...   228   1e-57
ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...   218   1e-54

>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1201

 Score =  228 bits (582), Expect = 1e-57
 Identities = 118/160 (73%), Positives = 125/160 (78%), Gaps = 8/160 (5%)
 Frame = +2

Query: 221 FLRPFCLMASLKLSLYVDSSWESKKLNCTVKALNFTDSKCCVPSFLGGGAFVVSPFCKLK 400
           FL P CLMASLKL LYVDSSWESKKLNCTVK L FTDSKCCVPSFLGGGAFVVSPFC LK
Sbjct: 258 FLWPLCLMASLKLPLYVDSSWESKKLNCTVKPLIFTDSKCCVPSFLGGGAFVVSPFCNLK 317

Query: 401 HIRVSKXXXXXXXXXXXXXNGDGVDGFEGNLGNESFVTERPNLGRE--KGKFNVWKRFRR 574
           HIRVS+             + +GVDGFEG LGNESFVTERPNLGR+  KGKFNVW+RFRR
Sbjct: 318 HIRVSRLETEELETSELSIDNEGVDGFEGELGNESFVTERPNLGRDSKKGKFNVWRRFRR 377

Query: 575 VKRVSRDSNYRSSFREKDRK------SMIVFDEKSDENVI 676
           VK+V +DSNYRSSFR KDRK        IVFD  SDENVI
Sbjct: 378 VKKVPKDSNYRSSFRLKDRKYGTEENPRIVFDVNSDENVI 417


>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565353364|ref|XP_006343602.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score =  218 bits (555), Expect = 1e-54
 Identities = 113/153 (73%), Positives = 122/153 (79%), Gaps = 8/153 (5%)
 Frame = +2

Query: 242 MASLKLSLYVDSSWESKKLNCTVKALNFTDSKCCVPSFLGGGAFVVSPFCKLKHIRVSKX 421
           MASLKL LYVDSSWESKKLNCTVKALNFTDSKC VPSFLGGGAFVVSPFC LKHIRVS+ 
Sbjct: 1   MASLKLPLYVDSSWESKKLNCTVKALNFTDSKCWVPSFLGGGAFVVSPFCNLKHIRVSRL 60

Query: 422 XXXXXXXXXXXXNGDGVDGFEGNLGNESFVTERPNLGR--EKGKFNVWKRFRRVKRVSRD 595
                       + +GVDGFEG LGN+SFVTERPNLGR  +KGKFNVWKRFRRVK+V RD
Sbjct: 61  ETEELETSELSLDNEGVDGFEGELGNDSFVTERPNLGRDSQKGKFNVWKRFRRVKKVPRD 120

Query: 596 SNYRSSFREKDRKS------MIVFDEKSDENVI 676
           SN+RSSFR KDRK+      MI FD  SDE+VI
Sbjct: 121 SNHRSSFRLKDRKNGMEENPMIAFDVNSDESVI 153