BLASTX nr result
ID: Atropa21_contig00036569
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00036569
(477 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 125 2e-30
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 105 6e-21
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p... 91 2e-18
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 92 2e-18
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 87 3e-18
ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein A... 80 3e-18
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 91 1e-16
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 1e-15
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 1e-15
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 87 3e-15
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 85 9e-15
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 85 1e-14
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 79 3e-14
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 74 4e-14
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 81 2e-13
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 76 5e-13
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript... 79 5e-13
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana] 79 5e-13
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 79 8e-13
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 78 1e-12
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 125 bits (314), Expect(2) = 2e-30
Identities = 64/124 (51%), Positives = 82/124 (66%)
Frame = +2
Query: 41 GGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL 220
GG+ Q+II LGY +L FKYLGV IEKV+ RI+SWTAK L
Sbjct: 539 GGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKL 598
Query: 221 *YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRM 400
YAGR QLVK+V+FGVQ+ WA LF++PAK++K I RSY+ SGV +TK AL++WD++
Sbjct: 599 SYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKV 658
Query: 401 CLPK 412
C PK
Sbjct: 659 CSPK 662
Score = 32.7 bits (73), Expect(2) = 2e-30
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 403 SSKAVGGMNFINLKAWNKVVVTKNC 477
S K GG+ INLK WN+ VTK C
Sbjct: 660 SPKYEGGLGLINLKIWNRSAVTKLC 684
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 105 bits (262), Expect = 6e-21
Identities = 53/144 (36%), Positives = 86/144 (59%)
Frame = +2
Query: 38 IGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKH 217
+ G+ +AE ++II LG+ +G+L KYLGV ++++ ++ WT +
Sbjct: 32 LSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRT 91
Query: 218 L*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDR 397
L YAGR+QL+ SV+F +Q YWA LF+LP +V+K + +S++ SG + T A V+WD+
Sbjct: 92 LSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQ 151
Query: 398 MCLPKQLVG*TSST*KLGIKLLSQ 469
+CLPK+ G LGIK + +
Sbjct: 152 VCLPKKEGG-------LGIKSIKE 168
>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
[Medicago truncatula]
Length = 120
Score = 90.5 bits (223), Expect(2) = 2e-18
Identities = 40/82 (48%), Positives = 62/82 (75%)
Frame = +2
Query: 179 KVVGRISSWTAKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGV 358
+++ RI +W++K L YAGR+QL+KSV+FGVQ+YW+ +FVLP KV+K I R ++ +G
Sbjct: 21 RIIYRIENWSSKFLSYAGRLQLIKSVLFGVQTYWSQVFVLPQKVLKLIQTACRVFLWTGK 80
Query: 359 NTITKIALVSWDRMCLPKQLVG 424
+ +K AL++W+R+CLPK G
Sbjct: 81 SGTSKRALIAWERICLPKTAGG 102
Score = 27.7 bits (60), Expect(2) = 2e-18
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 409 KAVGGMNFINLKAWNKVVVTK 471
K GG N I+LK WN+ + K
Sbjct: 98 KTAGGWNVIDLKVWNQAAICK 118
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 92.4 bits (228), Expect(2) = 2e-18
Identities = 48/128 (37%), Positives = 73/128 (57%)
Frame = +2
Query: 41 GGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL 220
GGLN Q I G+ +G L +YLGV +EK+VG+I W++K L
Sbjct: 220 GGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSSKLL 279
Query: 221 *YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRM 400
AGRIQLV+S+I + YW +F +P KV++ I++ RS+I SG + + +LV+W ++
Sbjct: 280 SIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQV 339
Query: 401 CLPKQLVG 424
C P + G
Sbjct: 340 CKPARCGG 347
Score = 25.4 bits (54), Expect(2) = 2e-18
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 418 GGMNFINLKAWNKVVVTK 471
GG+N INL+ WN + K
Sbjct: 346 GGLNLINLELWNVTAMLK 363
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 87.4 bits (215), Expect(2) = 3e-18
Identities = 47/135 (34%), Positives = 77/135 (57%)
Frame = +2
Query: 8 NPTCLNVQFTIGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVV 187
NP+ N+ +N E +IS G+ +G + F+YLG+ I+K+V
Sbjct: 550 NPSKCNIYCGSVDINVKEQLLLIS--GFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIV 607
Query: 188 GRISSWTAKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTI 367
GRI+ W+A L YAGR+QL++SVIF ++W LP V+ INA RS++ G + I
Sbjct: 608 GRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLWIGNSNI 667
Query: 368 TKIALVSWDRMCLPK 412
++ + ++W+++C PK
Sbjct: 668 SRKSPIAWEKVCSPK 682
Score = 30.0 bits (66), Expect(2) = 3e-18
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 403 SSKAVGGMNFINLKAWNKVVVTK 471
S K GG+N INL WNK+ + K
Sbjct: 680 SPKINGGLNIINLAIWNKISILK 702
>ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 170
Score = 80.1 bits (196), Expect(2) = 3e-18
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = +2
Query: 242 LVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMCLPKQLV 421
LV+SV+FG+Q+YWA LF++P+KV+K I+ + RSY+ SG NTITK ALV W R+C PK +
Sbjct: 2 LVQSVLFGIQAYWAQLFIIPSKVIKLIDVHCRSYVWSGTNTITKKALVVWKRVCSPKSVG 61
Query: 422 G 424
G
Sbjct: 62 G 62
Score = 37.0 bits (84), Expect(2) = 3e-18
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 403 SSKAVGGMNFINLKAWNKVVVTKNC 477
S K+VGG+N INL +WNK + K+C
Sbjct: 56 SPKSVGGLNLINLHSWNKAGIAKHC 80
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/122 (37%), Positives = 73/122 (59%)
Frame = +2
Query: 44 GLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL* 223
G+NS++A R+ + +G+ G L +YLG+ I+++ RI SW+A+ L
Sbjct: 14 GVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLS 73
Query: 224 YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMC 403
+AGR+QLV+SV+ +Q YWA +F+LP KV + ++ RSY+ G A V+WD +C
Sbjct: 74 FAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVC 133
Query: 404 LP 409
LP
Sbjct: 134 LP 135
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 81.6 bits (200), Expect(2) = 1e-15
Identities = 43/128 (33%), Positives = 68/128 (53%)
Frame = +2
Query: 41 GGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL 220
GG+ EA+++ + G L F+YLGV I+K+ R W A L
Sbjct: 734 GGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLL 793
Query: 221 *YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRM 400
YAGR+QLVK++++ +Q+YW +F LP K++KA+ R ++ +G + A V+WD +
Sbjct: 794 SYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFL 853
Query: 401 CLPKQLVG 424
PK G
Sbjct: 854 QQPKSTGG 861
Score = 26.9 bits (58), Expect(2) = 1e-15
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 409 KAVGGMNFINLKAWNKVVVTK 471
K+ GG+N N+ WNK + K
Sbjct: 857 KSTGGLNVTNMVLWNKAAILK 877
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 81.6 bits (200), Expect(2) = 1e-15
Identities = 43/127 (33%), Positives = 68/127 (53%)
Frame = +2
Query: 44 GLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL* 223
G++ A+ + Y+ G+L F+YLGV +E + R +W AK L
Sbjct: 732 GVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLS 791
Query: 224 YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMC 403
YAGR+QL+KS++ +Q+YWA +F L KV++A+ R ++ +G TK A V+W +
Sbjct: 792 YAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQ 851
Query: 404 LPKQLVG 424
PK G
Sbjct: 852 RPKSRGG 858
Score = 26.9 bits (58), Expect(2) = 1e-15
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 409 KAVGGMNFINLKAWNKVVVTK 471
K+ GG N IN+K WN+ + K
Sbjct: 854 KSRGGWNVINMKYWNRAAMLK 874
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/127 (34%), Positives = 71/127 (55%)
Frame = +2
Query: 44 GLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL* 223
G+++ + I+ G+ +G L FKYLGV I+K+VG+I WTA+ L
Sbjct: 118 GIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLS 177
Query: 224 YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMC 403
YAGR+QLV SV+F + +YW F P V++ I A R ++ +G ++ + V+W ++C
Sbjct: 178 YAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQIC 237
Query: 404 LPKQLVG 424
P+ G
Sbjct: 238 SPRSCGG 244
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 85.1 bits (209), Expect = 9e-15
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Frame = +2
Query: 20 LNVQFT---IGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVG 190
+N+Q T + G N + + + LG QG L +YLGV ++++
Sbjct: 277 INLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINS 336
Query: 191 RISSWTAKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTIT 370
R +SWTA+HL +AGR+QL+KSVI+ ++WA +F+LP + + + +++ SG
Sbjct: 337 RFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLWSGAPNSA 396
Query: 371 KIALVSWDRMCLPKQLVG*TSST*KLGIKLLS 466
+ A +SWD +C K+ G LG+K LS
Sbjct: 397 REAKISWDIVCSSKESGG-------LGLKRLS 421
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/146 (30%), Positives = 77/146 (52%)
Frame = +2
Query: 29 QFTIGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWT 208
+ + G N A + + LG G L +YLGV ++++ R +SWT
Sbjct: 736 ELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWT 795
Query: 209 AKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVS 388
A+HL +AGR+QL+KSVI+ ++WA +F+ P + ++ + +++ SG + A +S
Sbjct: 796 ARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFLWSGAPNSARGAKIS 855
Query: 389 WDRMCLPKQLVG*TSST*KLGIKLLS 466
W+ +C PK+ G LG+K LS
Sbjct: 856 WNIVCSPKEAGG-------LGLKRLS 874
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 78.6 bits (192), Expect(2) = 3e-14
Identities = 40/124 (32%), Positives = 63/124 (50%)
Frame = +2
Query: 44 GLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL* 223
G+ E I G+ GD F+YLGV + K+ G I W+ K L
Sbjct: 27 GIRPHELSHIQQLTGFSLGDFPFRYLGVPLLSSRLNVCHYALLLSKITGLIQGWSKKSLS 86
Query: 224 YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMC 403
YAG+++L+++VI G+ ++W +F LP VM INA R+++ + LV+W +C
Sbjct: 87 YAGKLELIRAVIQGIVNFWMEIFSLPQSVMDWINASCRNFLWGKADIGKNKPLVAWSVVC 146
Query: 404 LPKQ 415
PK+
Sbjct: 147 SPKK 150
Score = 25.4 bits (54), Expect(2) = 3e-14
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 403 SSKAVGGMNFINLKAWNKVVVTK 471
S K GG+ +NLK WN ++++
Sbjct: 147 SPKKEGGLGLLNLKDWNLALLSR 169
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 74.3 bits (181), Expect(2) = 4e-14
Identities = 41/137 (29%), Positives = 66/137 (48%)
Frame = +2
Query: 2 VSNPTCLNVQFTIGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEK 181
V NP + F GG++ +I Y +G L +YLGV I+K
Sbjct: 548 VVNPNKCRIYF--GGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIKYYLPLIDK 605
Query: 182 VVGRISSWTAKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVN 361
+ RI WT+K L GR+Q+V I + +W +P V+K I++ RS++ S
Sbjct: 606 ITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWSRST 665
Query: 362 TITKIALVSWDRMCLPK 412
IT+ + ++W+ +C PK
Sbjct: 666 EITRKSPIAWNSVCRPK 682
Score = 28.9 bits (63), Expect(2) = 4e-14
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 409 KAVGGMNFINLKAWNKVVVTKNC 477
K GG+N NLK WN + V NC
Sbjct: 682 KGQGGLNIFNLKVWNHITVL-NC 703
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/146 (30%), Positives = 78/146 (53%)
Frame = +2
Query: 32 FTIGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTA 211
F GG++ A Q++I+ +G+ +G F YLGV ++K+ ++S+W A
Sbjct: 374 FCNGGISDARLQQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKA 433
Query: 212 KHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSW 391
L AGR+QL+KSV + + ++ P+ ++K + +R++I SG T K+ V+W
Sbjct: 434 SILSIAGRVQLIKSVAQSMLIHTITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAW 493
Query: 392 DRMCLPKQLVG*TSST*KLGIKLLSQ 469
++C P+ G LGI+ LSQ
Sbjct: 494 KKLCKPQSQGG-------LGIRSLSQ 512
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 75.9 bits (185), Expect(2) = 5e-13
Identities = 38/123 (30%), Positives = 63/123 (51%)
Frame = +2
Query: 47 LNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL*Y 226
+ + E I G+ G F+YLGV + K+ G I W+ K L Y
Sbjct: 71 IRTHELSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLSY 130
Query: 227 AGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMCL 406
AG+++L+++VI G+ ++W +F LP V+ INA R+++ + K LV+W +C
Sbjct: 131 AGKLELIRAVIQGIVNFWIGIFPLPQSVLDRINASCRNFLWGKADIGKKKPLVAWSVVCS 190
Query: 407 PKQ 415
PK+
Sbjct: 191 PKR 193
Score = 23.9 bits (50), Expect(2) = 5e-13
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 403 SSKAVGGMNFINLKAWNKVVVT 468
S K GG+ NLK WN +++
Sbjct: 190 SPKREGGLGLFNLKDWNLALLS 211
>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 746
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/144 (31%), Positives = 72/144 (50%)
Frame = +2
Query: 38 IGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKH 217
+ G+ + I+ + G L +YLG+ +EK+ RI WTA+H
Sbjct: 1 MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60
Query: 218 L*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDR 397
L +AGR+QL+ SVI + ++W F LP+ +K I++ S++ SG TK A V+W
Sbjct: 61 LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120
Query: 398 MCLPKQLVG*TSST*KLGIKLLSQ 469
+C PK G LGI+ L +
Sbjct: 121 VCTPKDEGG-------LGIRSLKE 137
>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
Length = 478
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/144 (31%), Positives = 72/144 (50%)
Frame = +2
Query: 38 IGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKH 217
+ G+ + I+ + G L +YLG+ +EK+ RI WTA+H
Sbjct: 1 MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60
Query: 218 L*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDR 397
L +AGR+QL+ SVI + ++W F LP+ +K I++ S++ SG TK A V+W
Sbjct: 61 LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120
Query: 398 MCLPKQLVG*TSST*KLGIKLLSQ 469
+C PK G LGI+ L +
Sbjct: 121 VCTPKDEGG-------LGIRSLKE 137
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Frame = +2
Query: 20 LNVQFT---IGGLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVG 190
+N+Q T + G N + + + LG QG L +YLGV ++++
Sbjct: 277 INLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINS 336
Query: 191 RISSWTAKHL*YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTIT 370
R +SWTA+HL +AGR+QL+KSVI+ ++WA +F+LP + + + +++ SG
Sbjct: 337 RFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLWSGAPNSA 396
Query: 371 KIALVSWD 394
+ A +SWD
Sbjct: 397 REAKISWD 404
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/142 (30%), Positives = 74/142 (52%)
Frame = +2
Query: 44 GLNSAEAQRIISYLGYGQGDLHFKYLGVXXXXXXXXXXXXXXXIEKVVGRISSWTAKHL* 223
G++ +IS +G G L +YLG+ E++ RI +WT+++L
Sbjct: 152 GVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLS 211
Query: 224 YAGRIQLVKSVIFGVQSYWA*LFVLPAKVMKAINAYYRSYI*SGVNTITKIALVSWDRMC 403
+AGR+ L+ SV++ ++W F LP+ +K IN+ +++ SG + A VSWD +C
Sbjct: 212 FAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDIC 271
Query: 404 LPKQLVG*TSST*KLGIKLLSQ 469
PKQ G LG++ L++
Sbjct: 272 KPKQEGG-------LGLRSLTE 286