BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035989
         (1355 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi...   770   0.0  
ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containi...   766   0.0  
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi...   566   e-159
gb|EOX96228.1| Pentatricopeptide repeat (PPR) superfamily protei...   515   e-143
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]   514   e-143
ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi...   513   e-143
gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss...   509   e-142
ref|XP_002320719.2| pentatricopeptide repeat-containing family p...   503   e-140
ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part...   500   e-139
gb|ESW27348.1| hypothetical protein PHAVU_003G194000g [Phaseolus...   499   e-139
gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]     497   e-138
ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   493   e-137
ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containi...   490   e-136
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi...   476   e-131
gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola...   453   e-125
gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabi...   452   e-124
gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas...   451   e-124
ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Caps...   450   e-124
ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidop...   450   e-124
gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]            450   e-124

>ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Solanum tuberosum]
          Length = 625

 Score =  770 bits (1988), Expect = 0.0
 Identities = 375/405 (92%), Positives = 389/405 (96%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            LVSWNAMLTG V+LDQGFDV W+LFD+MPERDLVSWNLMLYCCVKSGNAEKATALFDMIP
Sbjct: 221  LVSWNAMLTGYVKLDQGFDVAWELFDKMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 280

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            KKDVVSWAIMVDGYAKIGKIDIARRYFDDMP RDVISCNAIM GYVKN HCLEALKVFHD
Sbjct: 281  KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNGHCLEALKVFHD 340

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            MLRG+SLAPDSTT L+ALSAVAELGYIDEGIALHCYIE+NGFLVAGKLGVALIDMYAKCG
Sbjct: 341  MLRGNSLAPDSTTALLALSAVAELGYIDEGIALHCYIEENGFLVAGKLGVALIDMYAKCG 400

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+DSAM VFNDIQEK V HWNAMIGGLAIHGFGD+AF++FMEMERLSLDIDDITFIAVLN
Sbjct: 401  SIDSAMGVFNDIQEKNVDHWNAMIGGLAIHGFGDVAFELFMEMERLSLDIDDITFIAVLN 460

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEGM+CFEIMRRAH MEPKLQHYGCMVDILSRAG+VEEAIKFVDEMPI PND
Sbjct: 461  ACAHSGLVKEGMICFEIMRRAHRMEPKLQHYGCMVDILSRAGHVEEAIKFVDEMPIHPND 520

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLSSCRN+ENVHI DP DKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM
Sbjct: 521  VVWRTLLSSCRNQENVHIGDPTDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 580

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV 139
            KE+DLKK  GSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV
Sbjct: 581  KEKDLKKTVGSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV 625



 Score = 88.2 bits (217), Expect = 7e-15
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            D+   N ++   V+ G  E    +FD +  +D VS+  M+DGY K G +D+A R FD MP
Sbjct: 156  DVFLQNCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMP 215

Query: 1080 --ERDVISCNAIMTGYVKNDHCLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYIDE 907
               R+++S NA++TGYVK D   +      D +    L   +    + L    + G  ++
Sbjct: 216  IEMRNLVSWNAMLTGYVKLDQGFDVAWELFDKMPERDLVSWN----LMLYCCVKSGNAEK 271

Query: 906  GIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAI 727
              AL   I     +        ++D YAK G +D A   F+D+  + V   NA++ G   
Sbjct: 272  ATALFDMIPKKDVV----SWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVK 327

Query: 726  HGFGDLAFQMFMEMER-LSLDIDDITFIAVLNACGHSGLVKEGMV--CFEIMRRAHHMEP 556
            +G    A ++F +M R  SL  D  T +  L+A    G + EG+   C+ I      +  
Sbjct: 328  NGHCLEALKVFHDMLRGNSLAPDSTTALLALSAVAELGYIDEGIALHCY-IEENGFLVAG 386

Query: 555  KLQHYGCMVDILSRAGYVEEAI 490
            KL     ++D+ ++ G ++ A+
Sbjct: 387  KLG--VALIDMYAKCGSIDSAM 406


>ref|XP_004229808.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Solanum lycopersicum]
          Length = 625

 Score =  766 bits (1978), Expect = 0.0
 Identities = 373/405 (92%), Positives = 388/405 (95%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            LVSWNA+LTG V+LDQGFDV W+LFDRMP+RDLVSWNLMLYCCVKSGNAEKATALFDMIP
Sbjct: 221  LVSWNALLTGYVKLDQGFDVAWELFDRMPQRDLVSWNLMLYCCVKSGNAEKATALFDMIP 280

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            KKDVVSWAIMVDGYAKIGKIDIARRYFDDMP RDVISCNAIM GYVKN HCLEALKVFHD
Sbjct: 281  KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVKNGHCLEALKVFHD 340

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            ML  SS APDSTT L+ALSAV+ELGYIDEGIALHCYIE+NGF VAGKLGVALIDMYAKCG
Sbjct: 341  MLSDSSPAPDSTTALLALSAVSELGYIDEGIALHCYIEENGFPVAGKLGVALIDMYAKCG 400

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            SVDSAM VFNDIQEK V HWNAMIGGLAIHGFGDLAF++FMEMERLSLDIDDITFIAVLN
Sbjct: 401  SVDSAMGVFNDIQEKNVDHWNAMIGGLAIHGFGDLAFELFMEMERLSLDIDDITFIAVLN 460

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            ACGHSGLVKEGM+CFEIMRRAHHMEPKLQHYGCMVD+LSRAG+VEEAIKFVDEMPI PND
Sbjct: 461  ACGHSGLVKEGMICFEIMRRAHHMEPKLQHYGCMVDVLSRAGHVEEAIKFVDEMPIHPND 520

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLSSCRN+ENVHI DP+DKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM
Sbjct: 521  VVWRTLLSSCRNQENVHIGDPMDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 580

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV 139
            KE+DLKK  GSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV
Sbjct: 581  KEKDLKKTVGSSRIELQGIVHEFSVGDKSHDQVEEIYSTLQMVCV 625



 Score = 84.7 bits (208), Expect = 8e-14
 Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            D+   N ++   V+ G  E    +FD +  +D VS+  ++DGY K G +D+A R FD MP
Sbjct: 156  DVFLQNCLISMYVRCGFVEYGHRVFDRMCMRDSVSYNTIIDGYVKCGMLDVACRLFDFMP 215

Query: 1080 --ERDVISCNAIMTGYVKNDHCLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYIDE 907
               R+++S NA++TGYVK D   +      D +    L   +    + L    + G  ++
Sbjct: 216  IEMRNLVSWNALLTGYVKLDQGFDVAWELFDRMPQRDLVSWN----LMLYCCVKSGNAEK 271

Query: 906  GIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAI 727
              AL   I     +        ++D YAK G +D A   F+D+  + V   NA++ G   
Sbjct: 272  ATALFDMIPKKDVV----SWAIMVDGYAKIGKIDIARRYFDDMPVRDVISCNAIMAGYVK 327

Query: 726  HGFGDLAFQMFMEM-ERLSLDIDDITFIAVLNACGHSGLVKEGMV--CFEIMRRAHHMEP 556
            +G    A ++F +M    S   D  T +  L+A    G + EG+   C+ I      +  
Sbjct: 328  NGHCLEALKVFHDMLSDSSPAPDSTTALLALSAVSELGYIDEGIALHCY-IEENGFPVAG 386

Query: 555  KLQHYGCMVDILSRAGYVEEAI 490
            KL     ++D+ ++ G V+ A+
Sbjct: 387  KLG--VALIDMYAKCGSVDSAM 406


>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  566 bits (1459), Expect = e-159
 Identities = 267/400 (66%), Positives = 329/400 (82%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+M++G  R ++G  V W+LF+ MP+RDL+SWN M+  CVK G  E A  LF+ +P
Sbjct: 221  LISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP 280

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DVVSWA MVDGYAK+G+IDIAR  FD+MPERDVISCNA+M GYV+N H +EAL  FHD
Sbjct: 281  KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHD 340

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            ML    L PD+ T+LI LSA+A+LG+ DEG+ALHCYIEDNGF ++ KLGVALIDMYAKCG
Sbjct: 341  MLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCG 400

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+D+A+ VF DI +K++ HWNA+IGGLAIHG G++AF++FMEME+L +  DDITFI VLN
Sbjct: 401  SIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLN 460

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++CFE+MRR H +EPKLQHYGCMVDIL RAG+VEEA KFV++MPI PND
Sbjct: 461  ACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPND 520

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLS+CRN EN  I +P+ K L+ ++S+N SSYVLLSNIYA FG W+ V R+R +M
Sbjct: 521  VVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMM 580

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            K+RDLKKI G S+IEL+G VHEF V DKSH QV EIYS L
Sbjct: 581  KQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSML 620



 Score = 85.5 bits (210), Expect = 5e-14
 Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 10/302 (3%)
 Frame = -3

Query: 1347 SWNAMLTGCVRLD---QGFDVVWDLFDRMP-ERDLVSWNLMLYCCVKSGNAEKATALFDM 1180
            S++ +L  C RL    +G  +   L  RM    D+   N ++   ++ G    A  LFD 
Sbjct: 124  SFSLVLKACSRLGLIKEGMQI-HGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDR 182

Query: 1179 IPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP--ERDVISCNAIMTGYVKNDHCLE-AL 1009
            + K+D VS+  M+DGY K G +  AR  FD MP  ++++IS N++++GY +++  L  A 
Sbjct: 183  MMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAW 242

Query: 1008 KVFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDM 829
            ++F +M +   ++ +S      +    + G ++    L   +     +        ++D 
Sbjct: 243  ELFEEMPKRDLISWNS-----MIDGCVKCGKMENAHHLFNQMPKRDVVSWAN----MVDG 293

Query: 828  YAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEM-ERLSLDIDDIT 652
            YAK G +D A  +F+++ E+ V   NAM+ G   +G    A   F +M  R  L  D+ T
Sbjct: 294  YAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNAT 353

Query: 651  FIAVLNACGHSGLVKEGMV--CFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVD 478
             +  L+A    G   EG+   C+ I      +  KL     ++D+ ++ G ++ A+   +
Sbjct: 354  LLITLSAIAQLGHFDEGVALHCY-IEDNGFSLSEKLG--VALIDMYAKCGSIDNALSVFE 410

Query: 477  EM 472
            ++
Sbjct: 411  DI 412


>gb|EOX96228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
            [Theobroma cacao]
          Length = 637

 Score =  515 bits (1327), Expect = e-143
 Identities = 243/400 (60%), Positives = 319/400 (79%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L++WN+M++G  +L+ G  +   LF+ MP+RDL+SWN M+   VK GN E A ALF  +P
Sbjct: 221  LITWNSMISGYAQLEYGMVMALKLFEEMPDRDLISWNSMINGFVKCGNMEDAQALFVKMP 280

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DVVSWA M++GYAK+GKID+ARR FD+MPERDV+ CNA+M GYV+N +C EAL++F+ 
Sbjct: 281  KRDVVSWANMINGYAKVGKIDLARRLFDEMPERDVVVCNAMMGGYVQNGYCSEALEIFYH 340

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            + R  +L PD+ T+LI LSA+A+LG ID+G+A+H Y+E+N F ++G+LGVALIDMY+KCG
Sbjct: 341  LQRYDNLQPDNATLLIVLSAIAQLGRIDKGLAIHQYLEENKFSLSGRLGVALIDMYSKCG 400

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            SV + M VF  I++++V HWNAMIGGLAIHG G+LAF + +EMERLS++ DDIT+I VLN
Sbjct: 401  SVKNGMLVFESIEDRSVDHWNAMIGGLAIHGLGELAFSLLIEMERLSVEPDDITYIGVLN 460

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            ACGH+GLVKEG++CF+IMRR H M PKL+HYGC+VDIL RAG + EA KF++EMPI  ND
Sbjct: 461  ACGHAGLVKEGLICFDIMRRVHKMVPKLKHYGCIVDILGRAGQIAEARKFIEEMPIEAND 520

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WR+LLS+C+N EN+ + +P+ + L+ L+S NSSSY+LLSN+YA  G W  V  VR  M
Sbjct: 521  VIWRSLLSACKNHENIDVGEPVAEHLISLDSCNSSSYILLSNMYAGLGMWSAVSNVRMRM 580

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            KER+LKKI G S IEL+G VHEF V DKSH QV EIYS L
Sbjct: 581  KERNLKKIPGCSWIELEGTVHEFFVQDKSHPQVMEIYSLL 620



 Score = 95.5 bits (236), Expect = 5e-17
 Identities = 70/265 (26%), Positives = 137/265 (51%), Gaps = 8/265 (3%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   ++ G    A  LFD + ++D VS+  M+DGY K G I +AR  F+ MP
Sbjct: 156  DLFLQNCLISLYIRCGFVGYARQLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMP 215

Query: 1080 --ERDVISCNAIMTGYVKNDH-CLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
              ++++I+ N++++GY + ++  + ALK+F +M     ++ +S      ++   + G ++
Sbjct: 216  MEDKNLITWNSMISGYAQLEYGMVMALKLFEEMPDRDLISWNS-----MINGFVKCGNME 270

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +  AL   +     +        +I+ YAK G +D A  +F+++ E+ V   NAM+GG  
Sbjct: 271  DAQALFVKMPKRDVVSWAN----MINGYAKVGKIDLARRLFDEMPERDVVVCNAMMGGYV 326

Query: 729  IHGFGDLAFQMFMEMERL-SLDIDDITFIAVLNACGHSGLVKEGMVCFEIMRRAHHMEPK 553
             +G+   A ++F  ++R  +L  D+ T + VL+A    G + +G+   + +      E K
Sbjct: 327  QNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIAQLGRIDKGLAIHQYLE-----ENK 381

Query: 552  LQHYG----CMVDILSRAGYVEEAI 490
                G     ++D+ S+ G V+  +
Sbjct: 382  FSLSGRLGVALIDMYSKCGSVKNGM 406


>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
          Length = 690

 Score =  514 bits (1325), Expect = e-143
 Identities = 246/392 (62%), Positives = 308/392 (78%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+M++G  R ++G  V W+LF+ MP+RDL+SWN M+  CVK G  E A  LF+ +P
Sbjct: 277  LISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMP 336

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DVVSWA MVDGYAK+G+IDIAR  FD+MPERDVISCNA+M GYV+N   +EAL  FHD
Sbjct: 337  KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHD 396

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            ML    L P + T+LI LSA+A+LG+ DEG+ALHCYIEDNGF ++ KLG ALIDMYAKCG
Sbjct: 397  MLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDMYAKCG 456

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+D+A+          + HWNA++ GLAIHG G++AF++FMEME+L +  +DITFI VLN
Sbjct: 457  SIDNAL----------IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLN 506

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++ F +MR  H +EPKLQHYGCMVDIL RAG+VEE  KFV++MPI PND
Sbjct: 507  ACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMPIEPND 566

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLS+CRN EN  I +P+ K L+ ++S+N SSYVLLSNIYA FG W+ V R+R +M
Sbjct: 567  VVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAXFGMWNDVYRIRMMM 626

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQ 178
            K+RDLKKI G S+IEL+G VHEF V DKSH Q
Sbjct: 627  KQRDLKKIPGCSQIELEGNVHEFFVRDKSHPQ 658



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 9/295 (3%)
 Frame = -3

Query: 1347 SWNAMLTGCVRLD---QGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMI 1177
            S++ +L  C RL    +G  +   L       D+   N ++   ++ G    A  LFD +
Sbjct: 180  SFSLVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRM 239

Query: 1176 PKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP--ERDVISCNAIMTGYVKNDHCLE-ALK 1006
              +D VS+  M+DGY K G +  AR  FD MP  ++++IS N++++GY +++  L  A +
Sbjct: 240  MXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWE 299

Query: 1005 VFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMY 826
            +F +M +   ++ +S      +    + G ++    L   +     +        ++D Y
Sbjct: 300  LFEEMPKRDLISWNS-----MIDGCVKCGKMENAHHLFNXMPKRDVVSWAN----MVDGY 350

Query: 825  AKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEM-ERLSLDIDDITF 649
            AK G +D A  +F+++ E+ V   NAM+ G   +G    A   F +M     L   + T 
Sbjct: 351  AKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATL 410

Query: 648  IAVLNACGHSGLVKEGMV--CFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAI 490
            +  L+A    G   EG+   C+ I      +  KL     ++D+ ++ G ++ A+
Sbjct: 411  LITLSAIAQLGHFDEGVALHCY-IEDNGFSLSEKLG--XALIDMYAKCGSIDNAL 462


>ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Citrus sinensis]
          Length = 634

 Score =  513 bits (1321), Expect = e-143
 Identities = 235/400 (58%), Positives = 320/400 (80%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN++L G  +L  G    W +F++MPERDL+SWN ML+ CVK G  + A ALFD +P
Sbjct: 218  LISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMP 277

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DVVSWA M+DGYAK+G++DIARR FD+MP+RDV++CNA+M GYV+N + ++AL++F +
Sbjct: 278  KRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDN 337

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M     L PD  +++I LSA+A+LG+ID+G+A+H Y+E + F + GK GVALIDMY+KCG
Sbjct: 338  MQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCG 397

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+++A+ VF  I++ +V HWNAMI GLAIHG G+LAF + MEMERLS++ DDITF  +LN
Sbjct: 398  SIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLN 457

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++CFE+MRR H +EP+LQHYGCMVDIL RAG++E A   +++MP+ PND
Sbjct: 458  ACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPND 517

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRTLLS+CRN EN+++ +P+ K L+G++S NSSSYVLLSN++A  G W+  RRVR++M
Sbjct: 518  VIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMM 577

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            KER+LKK+ G S IEL+G+VHEF V DKS  QV +IY  L
Sbjct: 578  KERNLKKLPGCSWIELEGVVHEFFVRDKSRLQVRDIYYML 617



 Score =  109 bits (272), Expect = 3e-21
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   V+ G  E A  LFD +  +D VS+  M+DGY K G I+ AR  FD MP
Sbjct: 153  DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 212

Query: 1080 --ERDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
              ER++IS N+++ GY +    L+ A ++F  M     ++ +S      L    + G +D
Sbjct: 213  IRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNS-----MLHGCVKCGKMD 267

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +  AL   +     +        +ID YAK G VD A  +F+++ ++ V   NAM+GG  
Sbjct: 268  DAQALFDKMPKRDVVSWAN----MIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYV 323

Query: 729  IHGFGDLAFQMFMEME-RLSLDIDDITFIAVLNACGHSGLVKEGMVCFEIMRRAHHMEPK 553
             +G+   A ++F  M+  L L  DD + + VL+A    G + +G+     + +       
Sbjct: 324  RNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEK-DQFSLN 382

Query: 552  LQHYGCMVDILSRAGYVEEAIKFVDEM 472
             +H   ++D+ S+ G +E AIK  +++
Sbjct: 383  GKHGVALIDMYSKCGSIENAIKVFEQI 409


>gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 637

 Score =  509 bits (1312), Expect = e-142
 Identities = 240/400 (60%), Positives = 316/400 (79%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L++WN+M++G  +L  G  +   LF++MP+RDL+SWN M+   VK GN E A  LFD +P
Sbjct: 221  LITWNSMISGYTQLKDGMGLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDKMP 280

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++DVVSWA M++GYAK+GKID+AR  F++M ERD++ CNA+M G V+N +C EAL++F+ 
Sbjct: 281  RRDVVSWANMINGYAKVGKIDLARSLFNEMSERDIVVCNAMMAGCVQNGYCGEALEIFYH 340

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            + R  SL PDS T+LIALSA+A+LG++D G+ALH Y++   F + G+LGVALIDMY+KCG
Sbjct: 341  LPRNCSLQPDSATLLIALSAIAQLGHVDRGLALHHYLKQKKFSLGGRLGVALIDMYSKCG 400

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+ +A+ VF  I+ KTV HWNAMIGGLAIHG G+LAF++ M+ME+L ++ DDIT+I VLN
Sbjct: 401  SIKNAVLVFEGIKYKTVDHWNAMIGGLAIHGMGELAFKLLMDMEKLCVEPDDITYIGVLN 460

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            ACGH+GLVKEG++CF+IMRR H M PKLQHYGC+VDIL RAG ++ A KF++EMPI  ND
Sbjct: 461  ACGHAGLVKEGLICFDIMRRVHKMVPKLQHYGCVVDILGRAGQIDVARKFIEEMPIEAND 520

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WR+LLS+C+N EN+ + +P  K L+ L+S NSSSYVLLSN+YA  G W+ V  VR +M
Sbjct: 521  VIWRSLLSACKNHENIEVGEPAGKHLITLDSCNSSSYVLLSNMYAGLGMWNAVSSVRLMM 580

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            KER+LKKI G SRIEL+G VHEF V DKSH QV EIYS L
Sbjct: 581  KERNLKKIPGCSRIELEGTVHEFFVQDKSHPQVMEIYSLL 620



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 9/266 (3%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   ++ G    A  LFD +  +D VS+  M+DGY K G ID+A+  FD MP
Sbjct: 156  DLFLQNCLISYYLRCGFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMP 215

Query: 1080 --ERDVISCNAIMTGYVK-NDHCLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
               +++I+ N++++GY +  D    AL +F  M     ++ +S      ++   + G ++
Sbjct: 216  LENKNLITWNSMISGYTQLKDGMGLALGLFEKMPDRDLISWNS-----MINGFVKCGNME 270

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +   L   +     +        +I+ YAK G +D A  +FN++ E+ +   NAM+ G  
Sbjct: 271  DAQILFDKMPRRDVVSWAN----MINGYAKVGKIDLARSLFNEMSERDIVVCNAMMAGCV 326

Query: 729  IHGFGDLAFQMFMEMER-LSLDIDDITFIAVLNACGHSGLVKEGMVCFEIMRRAHHMEPK 553
             +G+   A ++F  + R  SL  D  T +  L+A    G V  G+         H+++ K
Sbjct: 327  QNGYCGEALEIFYHLPRNCSLQPDSATLLIALSAIAQLGHVDRGLALH------HYLKQK 380

Query: 552  LQHYG-----CMVDILSRAGYVEEAI 490
                G      ++D+ S+ G ++ A+
Sbjct: 381  KFSLGGRLGVALIDMYSKCGSIKNAV 406


>ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550323642|gb|EEE99034.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 643

 Score =  503 bits (1295), Expect = e-140
 Identities = 236/400 (59%), Positives = 314/400 (78%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+++ G  + + G  V W LF +MPERDL+SWN M+  CVK G  E A  LFD +P
Sbjct: 226  LISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMP 285

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
             +D+VSWA M+DGYAK G++DIAR  FD+MPERDV++ NA+M GYV+N +C+EAL +F+ 
Sbjct: 286  NRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYG 345

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M    +   D+ T+LIALSA+A+LG+ID+G+A+H +IE+ GF + G+LGVALIDMY+KCG
Sbjct: 346  MQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCG 405

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+++AM VF +I+EK+V HWNA+IGGLAIHG G+LAF   MEMER+ ++ DDITFI +LN
Sbjct: 406  SIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLN 465

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            ACGH+GLVKEGM+CFE+MRR H +EPKLQHYGCMVDIL RAG++EEA  FV+EMP  PND
Sbjct: 466  ACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPND 525

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WR+LLS+C+  E+ ++  P+ + L+ L+S + SSYVL SN+YA  GKW+ VR+VR +M
Sbjct: 526  VIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMM 585

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            K+++LKKI G S IEL+G V+ F V DKSH Q   IYS L
Sbjct: 586  KQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSIL 625



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 42/321 (13%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   VK G   +A+ +FD +PK+D VS+  M+DGY K G+ID+AR  FD +P
Sbjct: 161  DLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 220

Query: 1080 --ERDVISCNAIMTGYVKN-DHCLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
              ER++IS N+++ GY ++ D  L A ++F  M     ++ +S      +    + G ++
Sbjct: 221  LEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPERDLISWNS-----MIDGCVKCGRME 275

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +   L   + +   +        +ID YAK G VD A  +F+++ E+ V  +NAM+GG  
Sbjct: 276  DAQGLFDRMPNRDIVSWAN----MIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYV 331

Query: 729  IHGFGDLAFQMFMEM------------------------------------ERLSLDIDD 658
             +G+   A  +F  M                                    E +   +D 
Sbjct: 332  QNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDG 391

Query: 657  ITFIAVLNACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVD 478
               +A+++     G ++  M+ FE ++     E  + H+  ++  L+  G  E A  F+ 
Sbjct: 392  RLGVALIDMYSKCGSIENAMMVFENIK-----EKSVDHWNAIIGGLAIHGLGELAFDFLM 446

Query: 477  EMP---ICPNDVVWRTLLSSC 424
            EM    + P+D+ +  LL++C
Sbjct: 447  EMERMRVEPDDITFIGLLNAC 467


>ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina]
            gi|557547533|gb|ESR58511.1| hypothetical protein
            CICLE_v10023562mg, partial [Citrus clementina]
          Length = 658

 Score =  500 bits (1287), Expect = e-139
 Identities = 226/383 (59%), Positives = 310/383 (80%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN++L G  +L  G    W +F++MPERDL+SWN ML+ CVK G  + A ALFD +P
Sbjct: 275  LISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNSMLHGCVKCGKMDDAQALFDKMP 334

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DVVSWA M+DGYAK+G++DIARR FD+MP+RDV++CNA+M GYV+N + ++AL++F +
Sbjct: 335  KRDVVSWANMIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYVRNGYSMKALEIFDN 394

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M     L PD  +++I LSA+A+LG+ID+G+A+H Y+E + F + GK GVALIDMY+KCG
Sbjct: 395  MQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEKDQFSLNGKHGVALIDMYSKCG 454

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+++A+ VF  I++ +V HWNAMI GLAIHG G+LAF + MEMERLS++ DDITF  +LN
Sbjct: 455  SIENAIKVFEQIEDGSVDHWNAMINGLAIHGLGELAFDLLMEMERLSIEPDDITFTGLLN 514

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++CFE+MRR H +EP+LQHYGCMVDIL RAG++E A   +++MP+ PND
Sbjct: 515  ACAHAGLVKEGLLCFELMRRIHKLEPELQHYGCMVDILGRAGHIEAARNLIEDMPMEPND 574

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRTLLS+CRN EN+++ +P+ K L+G++S NSSSYVLLSN++A  G W+  RRVR++M
Sbjct: 575  VIWRTLLSACRNYENLNVGEPVAKHLIGMDSSNSSSYVLLSNMFAGLGMWNDARRVRSMM 634

Query: 273  KERDLKKIAGSSRIELQGIVHEF 205
            KER+LKK+ G S IEL+G+VHEF
Sbjct: 635  KERNLKKLPGCSWIELEGVVHEF 657



 Score =  109 bits (272), Expect = 3e-21
 Identities = 80/267 (29%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   V+ G  E A  LFD +  +D VS+  M+DGY K G I+ AR  FD MP
Sbjct: 210  DLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGYVKSGNIESARELFDSMP 269

Query: 1080 --ERDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
              ER++IS N+++ GY +    L+ A ++F  M     ++ +S      L    + G +D
Sbjct: 270  IRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPERDLISWNS-----MLHGCVKCGKMD 324

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +  AL   +     +        +ID YAK G VD A  +F+++ ++ V   NAM+GG  
Sbjct: 325  DAQALFDKMPKRDVVSWAN----MIDGYAKLGRVDIARRLFDEMPKRDVVACNAMMGGYV 380

Query: 729  IHGFGDLAFQMFMEME-RLSLDIDDITFIAVLNACGHSGLVKEGMVCFEIMRRAHHMEPK 553
             +G+   A ++F  M+  L L  DD + + VL+A    G + +G+     + +       
Sbjct: 381  RNGYSMKALEIFDNMQCELYLHPDDASLVIVLSAIAQLGHIDKGVAIHRYLEK-DQFSLN 439

Query: 552  LQHYGCMVDILSRAGYVEEAIKFVDEM 472
             +H   ++D+ S+ G +E AIK  +++
Sbjct: 440  GKHGVALIDMYSKCGSIENAIKVFEQI 466


>gb|ESW27348.1| hypothetical protein PHAVU_003G194000g [Phaseolus vulgaris]
          Length = 618

 Score =  499 bits (1286), Expect = e-139
 Identities = 234/400 (58%), Positives = 306/400 (76%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L++WN+M+ G V  ++G    W LF +MPERDLVSWN M+  CVK G  E A  LFD +P
Sbjct: 216  LITWNSMIGGYVMWEEGLGFAWSLFVKMPERDLVSWNTMIGGCVKHGRVEDARRLFDEMP 275

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++D+VSW  M+DGYAK G +  ARR FD+MP RDVISCN++M GYV+N +C+EALK+FHD
Sbjct: 276  ERDLVSWVTMIDGYAKSGDVLAARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHD 335

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M R  ++ PD TT+LI L+A A+LG++++G+ +H Y+   G+ + GKLGVALIDMY+KCG
Sbjct: 336  MKRAGNVFPDDTTLLIVLTAFAQLGHVEDGVVIHHYLMKKGYSLNGKLGVALIDMYSKCG 395

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S++ A+ VF ++++K V HWNA+IGGLAIHG G++AF   MEM R+S+  DDITFI VL+
Sbjct: 396  SIEDAISVFENVEQKCVDHWNALIGGLAIHGMGEMAFDFLMEMGRVSVIPDDITFIGVLS 455

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GL+KEGM+CFEIM++ + +EPK+QHYGCMVD+LSRAG+VEEA K ++EMP+ PND
Sbjct: 456  ACRHAGLLKEGMICFEIMQKVYKLEPKVQHYGCMVDMLSRAGHVEEARKLIEEMPVEPND 515

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+W+ LLSSC+  EN  +  P+ + L  L S +  SYVLLSNIYA  G WD V+RVRT M
Sbjct: 516  VIWKALLSSCQIYENFSMGKPIAQHLTQLYSCSPGSYVLLSNIYASLGMWDNVKRVRTEM 575

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            KER LKKI G S IEL G VH FSV D++H QV EIYS L
Sbjct: 576  KERHLKKIPGCSWIELGGTVHHFSVKDRTHPQVTEIYSLL 615



 Score = 81.6 bits (200), Expect = 7e-13
 Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKK----DVVSWAIMVDGYAKIGKIDIARRYF 1093
            D  +++L +  C K G   +   +  ++ K     DV     ++  + + G +++AR+ F
Sbjct: 118  DAYTFSLTMKACGKVGLVREGMQVCGLLWKMNFGTDVFLQNCLIGLFVRCGCVELARQVF 177

Query: 1092 DDMPERDVISCNAIMTGYVKNDHCLEALKVFHDMLRGSSLAPDSTT---------VLIAL 940
            D MP+RD++S N+++ GYVK     +A  +F  M   + +  +S           +  A 
Sbjct: 178  DRMPDRDIVSYNSMIGGYVKFGKVEQARDLFDGMEERNLITWNSMIGGYVMWEEGLGFAW 237

Query: 939  SAVAELGYID--------EGIALHCYIEDNGFLVAGK------LGVALIDMYAKCGSVDS 802
            S   ++   D         G   H  +ED   L            V +ID YAK G V +
Sbjct: 238  SLFVKMPERDLVSWNTMIGGCVKHGRVEDARRLFDEMPERDLVSWVTMIDGYAKSGDVLA 297

Query: 801  AMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERL-SLDIDDITFIAVLNACG 625
            A  +F+++  + V   N+M+ G   +G+   A ++F +M+R  ++  DD T + VL A  
Sbjct: 298  ARRLFDEMPRRDVISCNSMMAGYVQNGYCVEALKIFHDMKRAGNVFPDDTTLLIVLTAFA 357

Query: 624  HSGLVKEGMVCFE-IMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEM 472
              G V++G+V    +M++ + +  KL     ++D+ S+ G +E+AI   + +
Sbjct: 358  QLGHVEDGVVIHHYLMKKGYSLNGKLG--VALIDMYSKCGSIEDAISVFENV 407


>gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis]
          Length = 626

 Score =  497 bits (1279), Expect = e-138
 Identities = 237/400 (59%), Positives = 315/400 (78%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            LV+WN+M++G  + D  F   W+LF+ MPERD VSWN M+   VK G  E A +LF+ +P
Sbjct: 215  LVTWNSMISGYAQSDLEF--AWELFETMPERDSVSWNTMINGYVKRGKIEDARSLFNRMP 272

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+D+VSWA ++DGY+K+G+I +AR  F++MP+RDV++CNA+M GYV N + +E L++F  
Sbjct: 273  KRDIVSWANLIDGYSKLGRIHVARSLFNEMPDRDVVACNAMMAGYVGNGYFMEGLEIFRH 332

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M  G  ++PD TT+LIALSAVA+LG+I++G+ALH YI++NG  +  KLGVALIDMYAKCG
Sbjct: 333  MQNGD-VSPDVTTLLIALSAVAQLGHIEKGVALHFYIQENGVPLGRKLGVALIDMYAKCG 391

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+D A+ VF  ++E++V HWNAMIGG AIHG G+LAF + MEMERLS+  DDITFI VLN
Sbjct: 392  SIDKAIAVFEGMEERSVDHWNAMIGGYAIHGLGELAFCLLMEMERLSVKPDDITFIGVLN 451

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            ACGH+GLVKEG++CFE+MRR H +EPKLQHYGC+VD+L RAG+VEEA +F++EMPI PND
Sbjct: 452  ACGHAGLVKEGLMCFELMRRVHKVEPKLQHYGCIVDMLGRAGHVEEARRFIEEMPIEPND 511

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLS+C++ +   I +P+ K L+  +S N S YVLLSN+YA  G W  V +VR +M
Sbjct: 512  VVWRTLLSACKSHKKFDIGEPIAKNLIQKDSCNPSFYVLLSNMYAGLGMWGDVFKVRMMM 571

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            +ER++ K+ G SRIEL+G+VHEF V DKSH Q+ EIYS L
Sbjct: 572  RERNVTKLPGCSRIELEGVVHEFMVQDKSHPQITEIYSML 611



 Score = 95.1 bits (235), Expect = 6e-17
 Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
 Frame = -3

Query: 1266 ERDLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDD 1087
            +  LVSW L   C       E A  +FD + K+D VS+  M+DGY K G ID+AR  FD 
Sbjct: 154  QNGLVSWYLRCGC------VEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDC 207

Query: 1086 MP--ERDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGY 916
            MP  E+++++ N++++GY ++D  LE A ++F  M        DS +    ++   + G 
Sbjct: 208  MPLEEKNLVTWNSMISGYAQSD--LEFAWELFETMPE-----RDSVSWNTMINGYVKRGK 260

Query: 915  IDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGG 736
            I++  +L   +     +        LID Y+K G +  A  +FN++ ++ V   NAM+ G
Sbjct: 261  IEDARSLFNRMPKRDIVSWAN----LIDGYSKLGRIHVARSLFNEMPDRDVVACNAMMAG 316

Query: 735  LAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLNACGHSGLVKEGMVC-FEIMRRAHHME 559
               +G+     ++F  M+   +  D  T +  L+A    G +++G+   F I      + 
Sbjct: 317  YVGNGYFMEGLEIFRHMQNGDVSPDVTTLLIALSAVAQLGHIEKGVALHFYIQENGVPLG 376

Query: 558  PKLQHYGCMVDILSRAGYVEEAIKFVDEM 472
             KL     ++D+ ++ G +++AI   + M
Sbjct: 377  RKLG--VALIDMYAKCGSIDKAIAVFEGM 403


>ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g45350, chloroplastic-like [Vitis vinifera]
          Length = 704

 Score =  493 bits (1269), Expect = e-137
 Identities = 237/394 (60%), Positives = 309/394 (78%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+M++   R ++   V W+LF+ MP++DL+SWN M+  CVK G  E    LF+ +P
Sbjct: 215  LISWNSMISEYARSEERLKVAWELFEEMPKKDLISWNSMINGCVKCGKMENDHHLFNRMP 274

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+ VVS A MV+G+AK+G+IDIAR  F +MPE DVISCNA+M  YV+N + +E+LK FHD
Sbjct: 275  KRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESLKNFHD 334

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            ML    L  D+ T+LI LSA+A+LG+ DEG+ALHCYIEDNGF ++ KLGVALID YAKCG
Sbjct: 335  ML-SKELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDTYAKCG 393

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+D+A+ VF DI  K++ HWNA++ GLAIHG G++AF++FMEME+L +  +DITFI VLN
Sbjct: 394  SIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFIGVLN 453

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++CFE+M+R   +EPKLQHY CMVDIL +AG+VEE  KFV++M I PND
Sbjct: 454  ACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSIEPND 513

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            VVWRTLLS+CRN EN  I +P+ K L+ ++S+N SSYVLLSNIYA FG W+ V R+R +M
Sbjct: 514  VVWRTLLSACRNHENFTIGEPVAKHLISVDSYNLSSYVLLSNIYAGFGIWNDVHRIRMMM 573

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVE 172
            K+RDLKKI G S+IEL+G VH+F V DKSH Q +
Sbjct: 574  KQRDLKKIPGCSQIELEGNVHKFFVRDKSHPQAK 607



 Score = 71.2 bits (173), Expect = 9e-10
 Identities = 73/314 (23%), Positives = 144/314 (45%), Gaps = 8/314 (2%)
 Frame = -3

Query: 1347 SWNAMLTGCVRLD---QGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMI 1177
            S++ +L  C RL    +G  +   L       D+   N ++   ++ G       LFD +
Sbjct: 118  SFSLVLKACSRLGLIKEGMQIHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRM 177

Query: 1176 PKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP--ERDVISCNAIMTGYVKNDHCLE-ALK 1006
             KKD VS+  M+DGY K G +  A   FD MP  ++ +IS N++++ Y +++  L+ A +
Sbjct: 178  MKKDSVSFNSMIDGYVKHGMVKSAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWE 237

Query: 1005 VFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMY 826
            +F +M +   ++ +S      ++   + G ++    L   +     +        +++ +
Sbjct: 238  LFEEMPKKDLISWNS-----MINGCVKCGKMENDHHLFNRMPKRXVVSXAN----MVNGH 288

Query: 825  AKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFI 646
            AK G +D A  +F ++ E  V   NAM+     +G+   + + F +M    L +D+ T +
Sbjct: 289  AKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESLKNFHDMLSKELFLDNATLL 348

Query: 645  AVLNACGHSGLVKEGMV--CFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEM 472
              L+A    G   EG+   C+ I      +  KL     ++D  ++ G ++ A+   +++
Sbjct: 349  ITLSAIAQLGHFDEGVALHCY-IEDNGFSLSEKLG--VALIDTYAKCGSIDNALSVFEDI 405

Query: 471  PICPNDVVWRTLLS 430
                 D  W  +LS
Sbjct: 406  DNKSID-HWNAILS 418


>ref|XP_004514160.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cicer arietinum]
          Length = 630

 Score =  490 bits (1262), Expect = e-136
 Identities = 231/404 (57%), Positives = 306/404 (75%), Gaps = 4/404 (0%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRL----DQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALF 1186
            L++WN+M+ G +R     D G    W LF +MPERDLVSWN M+  CVK GN E A A F
Sbjct: 224  LITWNSMIGGYLRYGEDDDDGLRFAWSLFVKMPERDLVSWNTMIDGCVKRGNMEDAQAFF 283

Query: 1185 DMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALK 1006
            D +PK+D+VSW  M+DGYAK+G I  A   FD MP RDV+ CN++M GYV+N +C+EALK
Sbjct: 284  DKMPKRDLVSWVTMIDGYAKLGDIVAATSLFDGMPRRDVVCCNSMMAGYVQNGYCIEALK 343

Query: 1005 VFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMY 826
            +FHDM R + + PD+TT+LI L+AVA+LG +++G+A+H Y+ DNG+ ++  LGVA+IDMY
Sbjct: 344  LFHDMRRATDMLPDNTTLLIVLTAVAQLGRVEDGVAIHQYLIDNGYSLSDNLGVAVIDMY 403

Query: 825  AKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFI 646
            +KCGS+++A+ VF +I +K V HWNA+IGGLA+HG  ++A    MEM R  +  DDITFI
Sbjct: 404  SKCGSIENAISVFENIDKKCVDHWNALIGGLAVHGMSEMALDFLMEMFRRCILPDDITFI 463

Query: 645  AVLNACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPI 466
            AVL+AC H+G++KEG++CFE+M++ + ++PKLQHYGCMVD+LSRAG+VEEA K ++ MPI
Sbjct: 464  AVLSACRHAGMLKEGLICFELMQKVYKLKPKLQHYGCMVDMLSRAGHVEEATKLIENMPI 523

Query: 465  CPNDVVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRV 286
             PNDV+W+TLLS+C+  EN+ I  P+  QL+ L S N+SSYVLLSN YA  G WD VRRV
Sbjct: 524  EPNDVIWKTLLSACQIHENLSIGKPIAHQLIQLKSCNASSYVLLSNFYASLGMWDDVRRV 583

Query: 285  RTIMKERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            R  MKER L+KI G S IEL GIVH+F V D++H Q  EIYS L
Sbjct: 584  RLEMKERHLEKIPGCSWIELGGIVHKFFVQDRTHPQATEIYSLL 627



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 82/377 (21%), Positives = 155/377 (41%), Gaps = 70/377 (18%)
 Frame = -3

Query: 1338 AMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIPKKD-- 1165
            A+   C+ ++ GF +           D  +++L L  C   G   +   +  ++ K D  
Sbjct: 109  ALFLLCLMIENGFFL-----------DKYTFSLALKACSMLGLMREGMQIHGLLCKTDFG 157

Query: 1164 --VVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHDM 991
              V     ++  + + G +D A++ FD + ERD +S N+++ GYVK      A ++FH M
Sbjct: 158  CDVFLQNCLIGLFMRCGCVDFAKQVFDRISERDSVSYNSMIDGYVKCGLIGRACELFHGM 217

Query: 990  -LRGSSL--------------APDSTTVLIALSAVAELGYID--------EGIALHCYIE 880
             ++  +L                D   +  A S   ++   D        +G      +E
Sbjct: 218  EIKEKNLITWNSMIGGYLRYGEDDDDGLRFAWSLFVKMPERDLVSWNTMIDGCVKRGNME 277

Query: 879  D---------NGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAI 727
            D            LV+    V +ID YAK G + +A  +F+ +  + V   N+M+ G   
Sbjct: 278  DAQAFFDKMPKRDLVS---WVTMIDGYAKLGDIVAATSLFDGMPRRDVVCCNSMMAGYVQ 334

Query: 726  HGFGDLAFQMFMEMERLS-LDIDDITFIAVLNACGHSGLVKEGMVCFE-IMRRAHHMEPK 553
            +G+   A ++F +M R + +  D+ T + VL A    G V++G+   + ++   + +   
Sbjct: 335  NGYCIEALKLFHDMRRATDMLPDNTTLLIVLTAVAQLGRVEDGVAIHQYLIDNGYSLSDN 394

Query: 552  L-----------------------------QHYGCMVDILSRAGYVEEAIKFVDEM---P 469
            L                              H+  ++  L+  G  E A+ F+ EM    
Sbjct: 395  LGVAVIDMYSKCGSIENAISVFENIDKKCVDHWNALIGGLAVHGMSEMALDFLMEMFRRC 454

Query: 468  ICPNDVVWRTLLSSCRN 418
            I P+D+ +  +LS+CR+
Sbjct: 455  ILPDDITFIAVLSACRH 471


>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
            gi|449480068|ref|XP_004155790.1| PREDICTED:
            pentatricopeptide repeat-containing protein At2g45350,
            chloroplastic-like [Cucumis sativus]
          Length = 638

 Score =  476 bits (1224), Expect = e-131
 Identities = 220/400 (55%), Positives = 306/400 (76%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+ML G  +   G  +  +LF++MPERDLVSWN ++    K G  E A +LF+ +P
Sbjct: 224  LISWNSMLGGFAQTKDGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMP 283

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            K+DV+SW+ M+DGYAK+G I +AR  FD+MP++DV++ N IM GY +N +  EAL++FH+
Sbjct: 284  KRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHE 343

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M R S+L+PD TT+++ALSA+++LG++++  ++H Y  +NG  V GK+ VALIDMY+KCG
Sbjct: 344  MQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCG 403

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+++A+ +F+ + +K + HWNAMI G+A +G G LAF M +EM RLS+  D ITFI VLN
Sbjct: 404  SIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLN 463

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC H+GLVKEG++CFE+MR+ H +EPKLQHYGCMVDIL +AG VE A+KF++EMPI PND
Sbjct: 464  ACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPND 523

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            ++WRTLLS+C+N EN  I + + K L+ ++S NSSSYVLLSNIYA+ G W    +VR +M
Sbjct: 524  IIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMM 583

Query: 273  KERDLKKIAGSSRIELQGIVHEFSVGDKSHDQVEEIYSTL 154
            K+++L K+ G S IEL+G+VHEF V DKSH  V EIYS L
Sbjct: 584  KKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVL 623



 Score = 96.3 bits (238), Expect = 3e-17
 Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 11/301 (3%)
 Frame = -3

Query: 1347 SWNAMLTGCVRL---DQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMI 1177
            S++ +L  C R+   ++G  +   L       +L   N ++   ++ G+ E A  +FD +
Sbjct: 127  SFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRM 186

Query: 1176 PKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP--ERDVISCNAIMTGYVK-NDHCLEALK 1006
            P +D VS+  M+DGY K G ID+AR  FD MP  ++++IS N+++ G+ +  D    AL+
Sbjct: 187  PIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALE 246

Query: 1005 VFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMY 826
            +F  M        D  +    +   A+ G I+   +L   +     +        +ID Y
Sbjct: 247  LFEKMPE-----RDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSN----MIDGY 297

Query: 825  AKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLS-LDIDDITF 649
            AK G +  A  +F+++ +K V  +N ++ G A +G+   A ++F EM+R S L  D+ T 
Sbjct: 298  AKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTL 357

Query: 648  IAVLNACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYG----CMVDILSRAGYVEEAIKFV 481
            +  L+A    G V++           + +E  +   G     ++D+ S+ G +E AI   
Sbjct: 358  VVALSAISQLGHVEKA-----ASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIF 412

Query: 480  D 478
            D
Sbjct: 413  D 413


>gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
          Length = 584

 Score =  453 bits (1165), Expect = e-125
 Identities = 214/385 (55%), Positives = 287/385 (74%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN M++G  + + G +V   LFD MPE+DL+SWN ++   VK    E A +LFD++P
Sbjct: 192  LISWNCMISGYTQSEDGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMP 251

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            +KDVV+WA M+DGYAK+G +  A++ FD+MP+RDV++ N++M GYV+N +  EA+ +F+D
Sbjct: 252  RKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFND 311

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L+PD TT++I LSA+A+LG + + + +H YI DN F + GKLGVALID Y+KCG
Sbjct: 312  MEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCG 371

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  +M VF +I+ K++ HWNAMIGGLAIHG G+ AF M +++E+ S+  DDITFI VLN
Sbjct: 372  SIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLN 431

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EPKLQHYGCMVDILSR+G +E A   ++EMPI PND
Sbjct: 432  ACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPND 491

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C N +     + + K L     +N SS+VLLSN+YA FG W  VRRVRT M
Sbjct: 492  VIWRTFLTACSNHKEFETGELVAKHLFLQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTM 551

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER L+KI G S IEL G VHEF V
Sbjct: 552  KERKLRKIPGCSWIELDGNVHEFFV 576



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 14/306 (4%)
 Frame = -3

Query: 1347 SWNAMLTGCVRL---DQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMI 1177
            S + +L  C RL   D G  V   L       DL   N ++   +K G    A  +FD +
Sbjct: 95   SISLVLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRM 154

Query: 1176 PKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP--ERDVISCNAIMTGYVKNDHCLE-ALK 1006
            P++D VS+  M+DGY K G I+ AR  FD MP  ++++IS N +++GY +++  +  A K
Sbjct: 155  PQRDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVASK 214

Query: 1005 VFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIED--NGFLVAGKLGV---- 844
            +F +M     ++ +S               + +G   H  IED  + F +  +  V    
Sbjct: 215  LFDEMPEKDLISWNS---------------LIDGYVKHRRIEDAKSLFDLMPRKDVVTWA 259

Query: 843  ALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLS-LD 667
             +ID YAK G V  A  +F+++ ++ V  +N+M+ G   + +   A  +F +ME+ S L 
Sbjct: 260  TMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLS 319

Query: 666  IDDITFIAVLNACGHSGLVKEGM-VCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAI 490
             D+ T + VL+A    G + + + +   IM     +  KL     ++D  S+ G +++++
Sbjct: 320  PDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLG--VALIDTYSKCGSIQKSM 377

Query: 489  KFVDEM 472
            +  +E+
Sbjct: 378  RVFEEI 383


>gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
          Length = 579

 Score =  452 bits (1162), Expect = e-124
 Identities = 214/385 (55%), Positives = 286/385 (74%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN++++G  +  +G D+   LF  MPE+DL+SWN M+   VK G  E A  LFDM+P
Sbjct: 186  LISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVP 245

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++DVV+WA M+DGYAK+G +  A+  FD MP RDV++ N++M GYV+N   +EAL++F D
Sbjct: 246  RRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSD 305

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L+PD TT++I LSA+A+LG + + + +H YI +  FL+ GKLGVALIDMY+KCG
Sbjct: 306  MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCG 365

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  AM VF  I+ K++ HWNAMIGGLAIHG G+ AF M +++ER S+  DDITF+ VLN
Sbjct: 366  SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLN 425

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EP+LQHYGCMVDILSR+G +E A   ++EMPI PND
Sbjct: 426  ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPND 485

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C + +     + + K L+    +N SSYVLLSN+YA FG W  VRRVRT+M
Sbjct: 486  VIWRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNMYASFGMWKDVRRVRTMM 545

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER ++KI G S IEL G VHEF V
Sbjct: 546  KERKIEKIPGCSWIELDGXVHEFFV 570



 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   +K G    A  +FD +P++D VS+  M+DGY K G I+ A   FD MP
Sbjct: 121  DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMP 180

Query: 1080 E--RDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
               +++IS N++++GY +    ++ A K+F +M     ++ +S      +    + G I+
Sbjct: 181  REMKNLISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNS-----MIDGYVKHGRIE 235

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +   L   +     +        +ID YAK G V  A  +F+ +  + V  +N+M+ G  
Sbjct: 236  DAKDLFDMVPRRDVVT----WATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYV 291

Query: 729  IHGFGDLAFQMFMEMERLS-LDIDDITFIAVLNACGHSGLVKEGM-VCFEIMRRAHHMEP 556
             + F   A ++F +ME+ S L  D+ T + VL+A    G + + M +   I+ +   +  
Sbjct: 292  QNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGG 351

Query: 555  KLQHYGCMVDILSRAGYVEEAI 490
            KL     ++D+ S+ G ++ A+
Sbjct: 352  KLG--VALIDMYSKCGSIQHAM 371


>gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
          Length = 617

 Score =  451 bits (1159), Expect = e-124
 Identities = 213/385 (55%), Positives = 285/385 (74%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN++++G  +   G D+  +LF  MPE+DL+SWN M+   VK G  E A  LFD +P
Sbjct: 224  LISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMP 283

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++DVV+WA M+DGYAK+G +  A+  FD MP RDV+S N++M GYV+N + +EAL++F D
Sbjct: 284  RRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSD 343

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L+PD TT++I LSA+A+LG + + + +H YI +  F + GKLGVALIDMY+KCG
Sbjct: 344  MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCG 403

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  AM VF  I+ K++ HWNAMIGGLAIHG G+ AF M +++ER S+  DDITF+ VLN
Sbjct: 404  SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLN 463

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EP+LQHYGCMVDILSR+G +E A   + EMPI PND
Sbjct: 464  ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPND 523

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C + +     + + K L+    +N SSYVLLSN+YA FGKW  VRR+RT+M
Sbjct: 524  VIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRIRTMM 583

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER ++KI G S IEL G VHEF V
Sbjct: 584  KERKIEKIPGCSWIELDGRVHEFFV 608


>ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Capsella rubella]
            gi|482564793|gb|EOA28983.1| hypothetical protein
            CARUB_v10025235mg [Capsella rubella]
          Length = 607

 Score =  450 bits (1158), Expect = e-124
 Identities = 213/385 (55%), Positives = 284/385 (73%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN++++G  +   GFD+   LF  MPE+DL+SWN M+   VK G  E A  LFD++P
Sbjct: 214  LISWNSIISGYAQASNGFDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKELFDVMP 273

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
             +DVV+WA M+DGYAK+G +  A+  FD MP RDV+S N++M GYV+N + +EAL++F  
Sbjct: 274  SRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSH 333

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L+PD TT++I LSA+A+LG + + + +H YI +  F + GKLGVALIDMY+KCG
Sbjct: 334  MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCG 393

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  AM VF  I+ K++ HWNAMIGGLAIHG G+ AF M +++ER S+  DDITF+ VLN
Sbjct: 394  SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLN 453

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EP+LQHYGCMVDILSR+G +E A   + EMPI PND
Sbjct: 454  ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPND 513

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C + +     + + K L+    +N SSYVLLSN+YA FGKW  VRRVRT+M
Sbjct: 514  VIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYASFGKWKDVRRVRTMM 573

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER ++K+ G S IEL G VHEF V
Sbjct: 574  KERKIEKVPGCSWIELDGRVHEFFV 598



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   +K G    A  +FD +P++D VS+  M+DGY K G I+ AR  FD MP
Sbjct: 149  DLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELFDLMP 208

Query: 1080 E--RDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
               +++IS N+I++GY +  +  + A K+F +M     ++ +S      +    + G I+
Sbjct: 209  REVKNLISWNSIISGYAQASNGFDIASKLFAEMPEKDLISWNS-----MIDGYVKHGRIE 263

Query: 909  EGIALHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLA 730
            +   L   +     +        +ID YAK G V  A  +F+ +  + V  +N+M+ G  
Sbjct: 264  DAKELFDVMPSRDVVT----WATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYV 319

Query: 729  IHGFGDLAFQMFMEMERLS-LDIDDITFIAVLNACGHSGLVKEGM-VCFEIMRRAHHMEP 556
             + +   A ++F  ME+ S L  D+ T + VL+A    G + + M +   I+ +   +  
Sbjct: 320  QNKYHMEALEIFSHMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG 379

Query: 555  KLQHYGCMVDILSRAGYVEEAI 490
            KL     ++D+ S+ G ++ A+
Sbjct: 380  KLG--VALIDMYSKCGSIQHAM 399



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
 Frame = -3

Query: 1077 RDVISCNAIMTGYVKNDHCLEALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYIDEGIA 898
            +D    NA++  +       +AL +F  ML  + ++ D  ++ + L A + LG++  G+ 
Sbjct: 78   KDPFLWNAVIKSHSHGKDPKQALLLFCLMLE-NGVSVDEFSMSLVLKACSRLGFVKGGLQ 136

Query: 897  LHCYIEDNGFLVAGKLGVALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGF 718
            +H ++   G      L   LI +Y KCG +  A  +F+ + ++    +N+MI G    G 
Sbjct: 137  IHGFLRKTGLWSDLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKCGS 196

Query: 717  GDLAFQMFMEMERLSLDIDDITFIAVLNACGHSGLVKEGMVCFEIMRR--AHHMEPKLQH 544
             + A ++F  M R   ++     I    A   +G        F+I  +  A   E  L  
Sbjct: 197  IESARELFDLMPREVKNLISWNSIISGYAQASNG--------FDIASKLFAEMPEKDLIS 248

Query: 543  YGCMVDILSRAGYVEEAIKFVDEMPICPNDVV-WRTLLSSCRNEENVHIEDPLDKQLV-- 373
            +  M+D   + G +E+A +  D MP    DVV W T++        VH    L  Q+   
Sbjct: 249  WNSMIDGYVKHGRIEDAKELFDVMP--SRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR 306

Query: 372  GLNSHNSSSYVLLSNIY 322
             + S+NS     + N Y
Sbjct: 307  DVVSYNSMMAGYVQNKY 323


>ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
            gi|218546767|sp|O22137.2|PP202_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g45350, chloroplastic; AltName: Full=Protein
            CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
            gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4
            protein [Arabidopsis thaliana]
          Length = 613

 Score =  450 bits (1157), Expect = e-124
 Identities = 214/385 (55%), Positives = 284/385 (73%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+M++G  +   G D+   LF  MPE+DL+SWN M+   VK G  E A  LFD++P
Sbjct: 220  LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++DVV+WA M+DGYAK+G +  A+  FD MP RDV++ N++M GYV+N + +EAL++F D
Sbjct: 280  RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L PD TT++I L A+A+LG + + I +H YI +  F + GKLGVALIDMY+KCG
Sbjct: 340  MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 399

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  AM VF  I+ K++ HWNAMIGGLAIHG G+ AF M +++ERLSL  DDITF+ VLN
Sbjct: 400  SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 459

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EP+LQHYGCMVDILSR+G +E A   ++EMP+ PND
Sbjct: 460  ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPND 519

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C + +     + + K L+    +N SSYVLLSN+YA FG W  VRRVRT+M
Sbjct: 520  VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMM 579

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER ++KI G S IEL G VHEF V
Sbjct: 580  KERKIEKIPGCSWIELDGRVHEFFV 604



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 80/268 (29%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   +K G    +  +FD +PK+D VS+  M+DGY K G I  AR  FD MP
Sbjct: 155  DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214

Query: 1080 --ERDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
               +++IS N++++GY +    ++ A K+F DM       P+    LI+ +++ + GY+ 
Sbjct: 215  MEMKNLISWNSMISGYAQTSDGVDIASKLFADM-------PEKD--LISWNSMID-GYVK 264

Query: 909  EGIALHCYIED--NGFLVAGKLGV----ALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNA 748
             G      IED    F V  +  V     +ID YAK G V  A  +F+ +  + V  +N+
Sbjct: 265  HG-----RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319

Query: 747  MIGGLAIHGFGDLAFQMFMEMERLS-LDIDDITFIAVLNACGHSGLVKEGM-VCFEIMRR 574
            M+ G   + +   A ++F +ME+ S L  DD T + VL A    G + + + +   I+ +
Sbjct: 320  MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379

Query: 573  AHHMEPKLQHYGCMVDILSRAGYVEEAI 490
              ++  KL     ++D+ S+ G ++ A+
Sbjct: 380  QFYLGGKLG--VALIDMYSKCGSIQHAM 405


>gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
          Length = 606

 Score =  450 bits (1157), Expect = e-124
 Identities = 214/385 (55%), Positives = 284/385 (73%)
 Frame = -3

Query: 1353 LVSWNAMLTGCVRLDQGFDVVWDLFDRMPERDLVSWNLMLYCCVKSGNAEKATALFDMIP 1174
            L+SWN+M++G  +   G D+   LF  MPE+DL+SWN M+   VK G  E A  LFD++P
Sbjct: 213  LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 272

Query: 1173 KKDVVSWAIMVDGYAKIGKIDIARRYFDDMPERDVISCNAIMTGYVKNDHCLEALKVFHD 994
            ++DVV+WA M+DGYAK+G +  A+  FD MP RDV++ N++M GYV+N + +EAL++F D
Sbjct: 273  RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 332

Query: 993  MLRGSSLAPDSTTVLIALSAVAELGYIDEGIALHCYIEDNGFLVAGKLGVALIDMYAKCG 814
            M + S L PD TT++I L A+A+LG + + I +H YI +  F + GKLGVALIDMY+KCG
Sbjct: 333  MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 392

Query: 813  SVDSAMDVFNDIQEKTVYHWNAMIGGLAIHGFGDLAFQMFMEMERLSLDIDDITFIAVLN 634
            S+  AM VF  I+ K++ HWNAMIGGLAIHG G+ AF M +++ERLSL  DDITF+ VLN
Sbjct: 393  SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 452

Query: 633  ACGHSGLVKEGMVCFEIMRRAHHMEPKLQHYGCMVDILSRAGYVEEAIKFVDEMPICPND 454
            AC HSGLVKEG++CFE+MRR H +EP+LQHYGCMVDILSR+G +E A   ++EMP+ PND
Sbjct: 453  ACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPND 512

Query: 453  VVWRTLLSSCRNEENVHIEDPLDKQLVGLNSHNSSSYVLLSNIYAQFGKWDYVRRVRTIM 274
            V+WRT L++C + +     + + K L+    +N SSYVLLSN+YA FG W  VRRVRT+M
Sbjct: 513  VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMM 572

Query: 273  KERDLKKIAGSSRIELQGIVHEFSV 199
            KER ++KI G S IEL G VHEF V
Sbjct: 573  KERKIEKIPGCSWIELDGRVHEFFV 597



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 80/268 (29%), Positives = 138/268 (51%), Gaps = 11/268 (4%)
 Frame = -3

Query: 1260 DLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDMP 1081
            DL   N ++   +K G    +  +FD +PK+D VS+  M+DGY K G I  AR  FD MP
Sbjct: 148  DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 207

Query: 1080 --ERDVISCNAIMTGYVKNDHCLE-ALKVFHDMLRGSSLAPDSTTVLIALSAVAELGYID 910
               +++IS N++++GY +    ++ A K+F DM       P+    LI+ +++ + GY+ 
Sbjct: 208  MEMKNLISWNSMISGYAQTSDGVDIASKLFADM-------PEKD--LISWNSMID-GYVK 257

Query: 909  EGIALHCYIED--NGFLVAGKLGV----ALIDMYAKCGSVDSAMDVFNDIQEKTVYHWNA 748
             G      IED    F V  +  V     +ID YAK G V  A  +F+ +  + V  +N+
Sbjct: 258  HG-----RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 312

Query: 747  MIGGLAIHGFGDLAFQMFMEMERLS-LDIDDITFIAVLNACGHSGLVKEGM-VCFEIMRR 574
            M+ G   + +   A ++F +ME+ S L  DD T + VL A    G + + + +   I+ +
Sbjct: 313  MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 372

Query: 573  AHHMEPKLQHYGCMVDILSRAGYVEEAI 490
              ++  KL     ++D+ S+ G ++ A+
Sbjct: 373  QFYLGGKLG--VALIDMYSKCGSIQHAM 398