BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035427
         (549 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   111   2e-30
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   112   2e-30
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   109   3e-30
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   109   3e-30
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   109   3e-30
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]   108   8e-30
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   115   1e-29
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    97   2e-24
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   117   2e-24
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   100   3e-24
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   116   3e-24
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...    86   2e-22
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   109   5e-22
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   106   3e-21
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   105   6e-21
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    87   9e-21
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   104   1e-20
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   104   2e-20
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   103   3e-20
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]    75   6e-20

>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  111 bits (278), Expect(2) = 2e-30
 Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ I LKN+LYV  L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 143 LSNNITLKNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIRTGVRRDG 201

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWHKR+ HPS +V K +  +   K    L++ C++
Sbjct: 202 LYYFGGAEGDSVQHVSVHNAASTLELWHKRMRHPSEKVVKLLPPVSNLKGS--LNKACEI 259

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  FPLS+N A+  FE IHCDLW  Y+
Sbjct: 260 CFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYK 293



 Score = 47.0 bits (110), Expect(2) = 2e-30
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK +
Sbjct: 297 SCGARYFLTIVDDFSRAVWIYLLVDKTD 324


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  112 bits (279), Expect(2) = 2e-30
 Identities = 64/154 (41%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ I LKN+LYVS L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 431 LSNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIGTGVRRDG 489

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWHKR+ HPS +V K +  +   K    L++ C++
Sbjct: 490 LYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGS--LNKACEI 547

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  FPL++N A+  FE IHCDLW  Y+
Sbjct: 548 CFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYK 581



 Score = 46.2 bits (108), Expect(2) = 2e-30
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC+A YF TI+DD SRAVWI++LV+K E
Sbjct: 585 SCAARYFLTIIDDFSRAVWIYLLVNKTE 612


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  109 bits (273), Expect(2) = 3e-30
 Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ I L+N+LYV  L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 184 LSNNITLQNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIGTGVRRDG 242

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWHKR+ HPS +V K +  +   K    L++ C++
Sbjct: 243 LYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGS--LNKACEI 300

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  FPLS+N A+  FE IHCDLW  Y+
Sbjct: 301 CFRAKHXRDKFPLSDNKATRIFEKIHCDLWGSYK 334



 Score = 48.1 bits (113), Expect(2) = 3e-30
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK E
Sbjct: 338 SCGARYFLTIVDDFSRAVWIYLLVDKTE 365


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  109 bits (273), Expect(2) = 3e-30
 Identities = 64/154 (41%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L + I LKN+LYVS L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 179 LLNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIGTGVRRDG 237

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWH R+ HPS +V K +  +   K    L++ C++
Sbjct: 238 LYYFGGAEGDSVQHVSVHNAASTLELWHNRMGHPSEKVVKLLPLVSNIKGS--LNKACEI 295

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  FPLS+N A+  FE IHCDLW  Y+
Sbjct: 296 CFRAKHPRDKFPLSDNKATRIFEKIHCDLWASYK 329



 Score = 48.1 bits (113), Expect(2) = 3e-30
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK E
Sbjct: 333 SCGARYFLTIVDDFSRAVWIYLLVDKTE 360


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  109 bits (273), Expect(2) = 3e-30
 Identities = 63/154 (40%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ I L+N+LYV  L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 98  LSNNITLQNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIGTGVRRDG 156

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWHKR+ HPS +V K +  +   K    L++ C++
Sbjct: 157 LYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGS--LNKACEI 214

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  FPLS+N A+  FE IHCDLW  Y+
Sbjct: 215 CFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYK 248



 Score = 48.1 bits (113), Expect(2) = 3e-30
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK E
Sbjct: 252 SCGARYFLTIVDDFSRAVWIYLLVDKTE 279


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score =  108 bits (269), Expect(2) = 8e-30
 Identities = 63/154 (40%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ I LKN+LYV  L CNL+ VSQL D L C + FN  M  + D   R+LI    RR  
Sbjct: 430 LSNNITLKNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHT-RELIGTGVRRDG 488

Query: 369 LYYF---QNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDV 199
           LYYF   +   +      +     +LWHKR+ HPS +V K +  +   K    L++ C++
Sbjct: 489 LYYFGGAEGDSVEHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGS--LNKACEI 546

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           C  AK  R  F LS+N A+  FE IHCDLW  Y+
Sbjct: 547 CFRAKHPRDKFSLSDNKATRIFEKIHCDLWGSYK 580



 Score = 48.1 bits (113), Expect(2) = 8e-30
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK E
Sbjct: 584 SCGARYFLTIVDDFSRAVWIYLLVDKTE 611


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  115 bits (288), Expect(2) = 1e-29
 Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L +K+ L+++L+V  L CNLIFV QL+D  +  + F   +  + D I R LI   E+   
Sbjct: 241 LGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQFTNKICAIQDRISRMLIGVGEQCEG 300

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTL-GLKKNGDRLDRECDVCQ 193
           LY+ + +  IRA K  ++  ++LWH+R+ HPS++V   I  +  + +N    ++ CD+C 
Sbjct: 301 LYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDSVGRNDGXKNKFCDICF 360

Query: 192 *AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
            A+QTR +F  S+N A + F++IHCDLW  YR P+
Sbjct: 361 RAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPA 395



 Score = 40.0 bits (92), Expect(2) = 1e-29
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC   YF TIVDD SRAVWI++L  K E
Sbjct: 396 SCGGIYFLTIVDDCSRAVWIYLLNRKNE 423


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 97.1 bits (240), Expect(2) = 2e-24
 Identities = 53/155 (34%), Positives = 80/155 (51%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L   + L+++L+V  L C+LI VSQL     C       + ++ D     LI        
Sbjct: 424 LGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITDKVCIVQDRTTLMLIGAGRELNG 483

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           LY+F+ +    A+ +  +    LWH+RL HPS++    ++      +     + C++C  
Sbjct: 484 LYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALH-LLPFSDVTSSTFDSKTCEICIQ 542

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPSL 85
           AKQTR  FPLS N  S  FE++HCDLW PYRT S+
Sbjct: 543 AKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSI 577



 Score = 41.2 bits (95), Expect(2) = 2e-24
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = -2

Query: 83  CSASYFFTIVDDHSRAVWIFILVDKKE 3
           C + YF T+VDD+SRAVW+++L  K+E
Sbjct: 578 CGSRYFLTLVDDYSRAVWLYLLPSKQE 604


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  117 bits (292), Expect = 2e-24
 Identities = 65/154 (42%), Positives = 83/154 (53%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ + L N+LYV  L C+LI VS+LV  + C   F   + V+ D   R LI   E R  
Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           +YY  +       K D      LWH+RL HPS  V  S + L    +     R CDVC  
Sbjct: 490 VYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSS-LPLFSGSSCSVSSRSCDVCFR 548

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR VFP S N ++D F +IHCD+W PYR PS
Sbjct: 549 AKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPS 582


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  100 bits (250), Expect(2) = 3e-24
 Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 2/157 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L   + L+ + +V  L C+LI VSQL     C       + ++ D I   LI   +++  
Sbjct: 389 LGSSLDLQEVFFVDGLHCHLISVSQLTRAKSCVFQITDKVCIIQDRITLTLIGAGKQQNG 448

Query: 369 LYYFQNMPLIRAM-KADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLD-RECDVC 196
           LY+F+    + +M + D+     LWH RL HPS++V K +        G   D + C++C
Sbjct: 449 LYFFRGTETVASMTRMDSSS--QLWHCRLGHPSSKVLKLLSFSD--STGHAFDSKTCEIC 504

Query: 195 Q*AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPSL 85
             AKQTR  FPLS N  S  FEM+HCDLW PYRT S+
Sbjct: 505 IKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSI 541



 Score = 37.0 bits (84), Expect(2) = 3e-24
 Identities = 12/26 (46%), Positives = 22/26 (84%)
 Frame = -2

Query: 83  CSASYFFTIVDDHSRAVWIFILVDKK 6
           C ++YF T+VD+++RAVW+++L  K+
Sbjct: 542 CGSNYFLTLVDNYTRAVWLYLLPSKQ 567


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  116 bits (291), Expect = 3e-24
 Identities = 65/154 (42%), Positives = 83/154 (53%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ + L N+LYV  L C+LI VS+LV  + C   F   + V+ D   R LI   E R  
Sbjct: 430 LSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDG 489

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           +YY  +       K D      LWH+RL HPS  V  S + L    +     R CDVC  
Sbjct: 490 VYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSS-LPLFSGSSCSVSSRSCDVCFR 548

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR VFP S N ++D F +IHCD+W PYR PS
Sbjct: 549 AKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPS 582


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score = 85.9 bits (211), Expect(2) = 2e-22
 Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
 Frame = -1

Query: 531 LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGELYYFQN 352
           L ++L+V +L+C LI V++L+  L C   F   + V+ D   + LI        +Y+ Q 
Sbjct: 435 LTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDRTSKMLIGVGTESNGVYHLQR 494

Query: 351 MPLIRAMKADTVDWFD---LWHKRLDHPSAQVTKSIMTL--GLKKNGDRLDRECDVCQ*A 187
             ++ A  A+ V W     LWH RL HPS++V  S++            L   CDVC  A
Sbjct: 495 AEVV-ATSANVVKWKTNKALWHMRLGHPSSKVLSSVLPSLEDFDSCSSDLKTICDVCVRA 553

Query: 186 KQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           KQTR+ F  S N A + F  IH D+W PY+  S
Sbjct: 554 KQTRASFSESFNKAEECFSFIHYDVWGPYKHAS 586



 Score = 45.4 bits (106), Expect(2) = 2e-22
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDDHSRAVWI +++ K E
Sbjct: 587 SCGAHYFLTIVDDHSRAVWIHLMLAKSE 614


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  109 bits (272), Expect = 5e-22
 Identities = 60/154 (38%), Positives = 83/154 (53%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L++ + L N+L+V +L C LI VS+L+    C  TF   +  + D   + LI   E RG 
Sbjct: 447 LSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGG 506

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           +YY  ++   +   A+      LWH+RL HPS  V  S + L  K +       CDVC  
Sbjct: 507 VYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSS-LPLFSKTSSTVTSHSCDVCFR 565

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR VFP S N   + F +IHCD+W PYR P+
Sbjct: 566 AKQTREVFPESINKTEECFSLIHCDVWGPYRVPA 599


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  106 bits (265), Expect = 3e-21
 Identities = 56/154 (36%), Positives = 81/154 (52%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L   + LK++ YV  L  +LI V Q++D   C +       V+ D   R +    +R   
Sbjct: 209 LGSHLILKSVFYVKELESDLISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENG 268

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
            + F+ M    A+       FDLWH+RL H S ++   +    L    + L+  CD C  
Sbjct: 269 SFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMR 328

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR  FPLS+N + D+F++IHCD+W PYRTPS
Sbjct: 329 AKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPS 362


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  105 bits (263), Expect = 6e-21
 Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L+D   L ++L+V +  C LI VS+L+        F      + D  +R LI   E R  
Sbjct: 417 LHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTLIGAGEEREG 476

Query: 369 LYYFQNM--PLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNG-DRLDRECDV 199
           +YYF  +  P +    +D     DLWH+RL HPS  V  S+        G D++D  CD 
Sbjct: 477 VYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPECNRSSQGFDKID-SCDT 535

Query: 198 CQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           C  +KQTR VFP+S N   + F +IH D+W PYRTPS
Sbjct: 536 CFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPS 572


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 87.0 bits (214), Expect(2) = 9e-21
 Identities = 54/150 (36%), Positives = 77/150 (51%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L  ++ L N+L+V  L CNLI VSQL+      +       V+ D   RK+I   E+R  
Sbjct: 354 LGGELKLHNVLFVPKLKCNLISVSQLLRDSGLVIQLTDKFCVIQDRSTRKVIGAGEQREG 413

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           LY+      + A K + V  F+LWH+R+ +PS +V   I  +    N    ++ CDVC  
Sbjct: 414 LYFLNGAASVHAFKMNGVTSFELWHRRMGYPSFKVLGLIPEVVC--NNKNENKVCDVCFX 471

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPY 100
           AKQTR +F  SEN A   F++IH      Y
Sbjct: 472 AKQTRKMFSSSENKAKKCFDLIHXSCGAXY 501



 Score = 38.9 bits (89), Expect(2) = 9e-21
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TI DD SR VWI++L  K E
Sbjct: 496 SCGAXYFLTIXDDCSRVVWIYLLNGKNE 523


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/154 (35%), Positives = 80/154 (51%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L   + LK++ YV  L  +LI V Q++D   C +       V+ D   R +    +R   
Sbjct: 209 LGSHLILKSVFYVKELESDLISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENG 268

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
            + F+ M    A+       FDLWH+RL H S ++   +    L    + L+  CD C  
Sbjct: 269 SFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMR 328

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR  FPL +N + D+F++IHCD+W PYRTPS
Sbjct: 329 AKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPS 362


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  104 bits (259), Expect = 2e-20
 Identities = 58/154 (37%), Positives = 83/154 (53%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L+  + LKN+LYV +L CNLI + QL+   D  +TF     V+ D   R  I   + R  
Sbjct: 306 LSKDLCLKNVLYVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDRTSRNPIGVGKLRNG 365

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
           +YY++ +   +       + ++LWH+RL HPS +V  SI +LG        D  CD C  
Sbjct: 366 VYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCR 425

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
            KQ R+ F LS   A + F +IH D+W PYRTP+
Sbjct: 426 GKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPT 459


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  103 bits (257), Expect = 3e-20
 Identities = 52/154 (33%), Positives = 83/154 (53%)
 Frame = -1

Query: 549 LNDKI*LKNILYVSNLTCNLIFVSQLVDYLDCDMTFNRIMYVMLDSIMRKLIEKDERRGE 370
           L   + + ++ YV     +LI + QL+D   C +  +    V+ D   R ++    R G 
Sbjct: 309 LGSNLVMISVFYVEEFQSDLISIGQLMDENRCVLQMSDRFLVVQDRTSRMVMGAGRRVGG 368

Query: 369 LYYFQNMPLIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLKKNGDRLDRECDVCQ* 190
            ++F++  +  ++       ++LWH R+ HP+A+V   I    +  +   L++ CDVC  
Sbjct: 369 TFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHR 428

Query: 189 AKQTRSVFPLSENIASDTFEMIHCDLWRPYRTPS 88
           AKQTR+ FPLS N     FE+I+CDLW PYRTPS
Sbjct: 429 AKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPS 462


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score = 75.1 bits (183), Expect(2) = 6e-20
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
 Frame = -1

Query: 405 RKLIEKDERRGELYYFQNMP---LIRAMKADTVDWFDLWHKRLDHPSAQVTKSIMTLGLK 235
           R+LI    RR  LYYF       +      +     +LWHKR+ HPS +V K +  +   
Sbjct: 358 RELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL 417

Query: 234 KNGDRLDRECDVCQ*AKQTRSVFPLSENIASDTFEMIHCDLWRPYR 97
           K    L++ C++C  AK  R  FPLS+N A+  FE IHCDLW  Y+
Sbjct: 418 KGS--LNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYK 461



 Score = 48.1 bits (113), Expect(2) = 6e-20
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  SCSASYFFTIVDDHSRAVWIFILVDKKE 3
           SC A YF TIVDD SRAVWI++LVDK E
Sbjct: 465 SCGARYFLTIVDDFSRAVWIYLLVDKTE 492