BLASTX nr result
ID: Atropa21_contig00035416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035416
(1447 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum] 432 e-118
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 395 e-107
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 385 e-104
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 385 e-104
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 385 e-104
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 384 e-104
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 381 e-103
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 379 e-102
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 378 e-102
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 378 e-102
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 378 e-102
ref|XP_004295380.1| PREDICTED: uncharacterized protein LOC101310... 376 e-101
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 373 e-101
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 372 e-100
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 372 e-100
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 372 e-100
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera] 372 e-100
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 372 e-100
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 370 e-100
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 369 2e-99
>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 432 bits (1110), Expect = e-118
Identities = 228/428 (53%), Positives = 294/428 (68%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLK- 178
R +I++A S W L QMDV NAFLQG L EEVYM +P+GF GE KVC+LLKSLYGLK
Sbjct: 1015 RCVIALAVSKGWTLYQMDVYNAFLQGVLGEEVYMKMPEGFAKPGENKVCKLLKSLYGLKQ 1074
Query: 179 -----NIKLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
N+KL+ L G+ QS++D+SLFT + T SN QLI E +
Sbjct: 1075 ASRQWNLKLTKVLQATGFSQSAHDYSLFTLKRGEDIVIVLVYVDDLLITGSNMQLIAEVK 1134
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ LH QFK+KDLG+LK+FLGIEVLRS GI+LN RKY LEL++ GL GAKPA+ PME N
Sbjct: 1135 ACLHKQFKLKDLGELKFFLGIEVLRSSGGIILNQRKYILELIAEAGLTGAKPATAPMESN 1194
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
++LT+VE+D Y K D +L+DI SYQ+LIGKLIY+TITRPDIS+AVQ LSQ
Sbjct: 1195 LRLTSVEHDQA------NGYNK--DDVLHDITSYQRLIGKLIYVTITRPDISYAVQTLSQ 1246
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ PK SH EAA RV+ YLK + GQ + + P +T +CD+DW +CPNTRR++T YV
Sbjct: 1247 FMQSPKKSHIEAATRVIRYLKGSVGQGVWLHSEPTNIITCWCDSDWAACPNTRRSITGYV 1306
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
+ G+S AEAEYRSMA AV+EI WL+ L KEL +++ +P+ + D
Sbjct: 1307 IKFGES---------------SAEAEYRSMASAVSEITWLLGLFKELGVNVQLPITIFSD 1351
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+K+A+Q+A+ P+ +ERTKHIEIDCHF+R+K+K G + T +V ++ QLAD+LTKGL QH
Sbjct: 1352 SKSAIQLAANPVLYERTKHIEIDCHFIRDKIKAGEVNTAYVHTQQQLADILTKGLSQVQH 1411
Query: 1244 QFLLSKLG 1267
LL KLG
Sbjct: 1412 VHLLGKLG 1419
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 395 bits (1014), Expect = e-107
Identities = 211/433 (48%), Positives = 281/433 (64%), Gaps = 6/433 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R ++++AAS +W + Q+DV+NAFL G+L EEVYM+ P G QGE VCRL KS+YGLK
Sbjct: 1311 RCLLTVAASRNWYIHQLDVHNAFLHGNLQEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQ 1370
Query: 182 IK------LSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
++ + AGY QS D+SLFTK T ++ I+ +
Sbjct: 1371 ASRNWFSTFTATVKSAGYIQSKADYSLFTKSQGNKFTAILIYVDDILLTGNDLHEIKMLK 1430
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L +F +KDLG+LKYFLGIE RSK GI ++ RKYTL++L GL G KP PME N
Sbjct: 1431 THLLKRFFIKDLGELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQN 1490
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+KLT + + +L+D Y++L+G+LIYLT+TRPDI ++V+ LSQ
Sbjct: 1491 LKLTNEDGE-----------------LLHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQ 1533
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FM P+ HWEAALRVL Y+K +PGQ + + L+ +CD+DW C +RR+V+ Y
Sbjct: 1534 FMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYC 1593
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG SLISWKSKKQ VSRS AEAEYR+MA+ E+ WL +LK+LK+ + P L CD
Sbjct: 1594 VFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILKDLKVELDKPAPLFCD 1653
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
N+AAL IA+ P+FHERTKHIEIDCH VREKL+ G+I+ +VS+K+QLAD+ TK LG Q
Sbjct: 1654 NQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLADVFTKALGREQF 1713
Query: 1244 QFLLSKLGFSMCS 1282
+FL +KLG M S
Sbjct: 1714 EFLCTKLGCGMIS 1726
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 385 bits (990), Expect = e-104
Identities = 208/428 (48%), Positives = 279/428 (65%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
RTI+++AA+ DW + QMDV+NAFL GDL+EEVYM LP GF +KVCRL KSLYGLK
Sbjct: 1078 RTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQ 1137
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLS+AL + G+ QS D+SLF+ ++ +N I+ +
Sbjct: 1138 APRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFK 1197
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
S LH F +KDLG+LKYFLG+EV R G L+ RKY L+++ GL G KP++ P+ LN
Sbjct: 1198 SQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALN 1257
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL + I P+ + Y++L+G+ IYLTITRPD+S+AV ILSQ
Sbjct: 1258 HKLAS-----------------ITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQ 1300
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P ++HWEAALR++ YLK +P Q I +R + YCD+D+ +CP TRR+++AYV
Sbjct: 1301 FMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYV 1360
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LGDS ISWK+KKQ TVS S AEAEYR+MA + E+ WL LLK+L + S P++L CD
Sbjct: 1361 VYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCD 1420
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
++AA+ IA+ P+FHERTKHIE DCH VR+ + + LI TE + ++ Q+ADLLTK L
Sbjct: 1421 SEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTF 1480
Query: 1244 QFLLSKLG 1267
+ LLS LG
Sbjct: 1481 ERLLSTLG 1488
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 385 bits (990), Expect = e-104
Identities = 208/428 (48%), Positives = 279/428 (65%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
RTI+++AA+ DW + QMDV+NAFL GDL+EEVYM LP GF +KVCRL KSLYGLK
Sbjct: 358 RTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQ 417
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLS+AL + G+ QS D+SLF+ ++ +N I+ +
Sbjct: 418 APRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFK 477
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
S LH F +KDLG+LKYFLG+EV R G L+ RKY L+++ GL G KP++ P+ LN
Sbjct: 478 SQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALN 537
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL + I P+ + Y++L+G+ IYLTITRPD+S+AV ILSQ
Sbjct: 538 HKLAS-----------------ITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQ 580
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P ++HWEAALR++ YLK +P Q I +R + YCD+D+ +CP TRR+++AYV
Sbjct: 581 FMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYV 640
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LGDS ISWK+KKQ TVS S AEAEYR+MA + E+ WL LLK+L + S P++L CD
Sbjct: 641 VYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCD 700
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
++AA+ IA+ P+FHERTKHIE DCH VR+ + + LI TE + ++ Q+ADLLTK L
Sbjct: 701 SEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTF 760
Query: 1244 QFLLSKLG 1267
+ LLS LG
Sbjct: 761 ERLLSTLG 768
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 385 bits (988), Expect = e-104
Identities = 214/428 (50%), Positives = 277/428 (64%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R ++S+A+ W L Q+DVNNAFL GDL E+VYM LP GF +GE +VC+L KSLYGLK
Sbjct: 1060 RVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQ 1119
Query: 182 ------IKLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
+KLSSAL AG++QS D+SLF + ++ ++ + I E +
Sbjct: 1120 ASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILAGNSLEDIIETK 1179
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
L S FK+KD+GQL+YFLGIEV RSK GI+L RKY LELL G GAKP+ P+E +
Sbjct: 1180 QFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLEDAGFLGAKPSRFPVEQS 1239
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+ LT + + L D Y++L+G+LIYLTITRPD+ +AV ILSQ
Sbjct: 1240 LTLT-----------------RGDGAELKDASQYRRLVGRLIYLTITRPDLVYAVHILSQ 1282
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FM P+ H +AA +VL Y+K+TPGQ I + + LT YCDADW C +TRR+ T Y
Sbjct: 1283 FMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRSTTGYC 1342
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
G++ ISWK+KKQ TVSRS AEAEYRSMA EI WL LL +L ++ + V+L CD
Sbjct: 1343 IFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAVKLFCD 1402
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
N+AA+ IAS P+FHERTKHIE+DCH VREK++ GL+KT + ++ Q ADL TK L Q
Sbjct: 1403 NQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADLFTKPLSSKQF 1462
Query: 1244 QFLLSKLG 1267
LLSKLG
Sbjct: 1463 STLLSKLG 1470
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 384 bits (985), Expect = e-104
Identities = 209/436 (47%), Positives = 284/436 (65%), Gaps = 6/436 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
RT++ A++ W + QMDV+NAFL GDL+EEVYM LP GF KVCRL KSLYGLK
Sbjct: 1083 RTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQ 1142
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLS +LL G+ QS D+SLF+ ++ ++++ +
Sbjct: 1143 APRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFK 1202
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
L F +KDLG+LKYFLGIEV R GI L+ RKY L++++ G G++PA TP+E N
Sbjct: 1203 DYLSRCFSMKDLGKLKYFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQN 1262
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
L + DD P+L+D Y++L+G+L+YL TRP++S++V +L+Q
Sbjct: 1263 HHLAS----------DD-------GPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQ 1305
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ +H++AALRV+ YLK +PGQ IL+ P L +YCD+DW+SCP TRR+++AYV
Sbjct: 1306 FMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRRSISAYV 1365
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQ TVS S AEAEYR+M+ A+ EI WL +LLKEL I S P RL CD
Sbjct: 1366 VLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKLLKELGIEQSTPARLYCD 1425
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+KAA+ IA+ P+FHERTKHIE DCH VR+ +++G+I T+ V + QLAD+ TK LG Q
Sbjct: 1426 SKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQF 1485
Query: 1244 QFLLSKLGFSMCSNPS 1291
+L+SKLG P+
Sbjct: 1486 LYLMSKLGVQNLHTPT 1501
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 381 bits (979), Expect = e-103
Identities = 207/428 (48%), Positives = 275/428 (64%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
RT ++IAAS +W L QMDV+NAFL GDL+EEVYM LP GF VCRL KSLYGLK
Sbjct: 1043 RTFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQ 1102
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KL +AL G+ QS D+SLFT + ++ ++ +
Sbjct: 1103 APRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDSAALKTFK 1162
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L FK+KDLG LKYFLGIEV RS G+ L RKYTL+++S GL GAKP P+E N
Sbjct: 1163 AYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQN 1222
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+L + +L+++ SY++L+G+LIYL +TRPD++++V ILSQ
Sbjct: 1223 HRLGLANGE-----------------LLSNLESYRRLVGRLIYLAVTRPDLAYSVHILSQ 1265
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+I HWEAALRV+ YLK TPGQ IL+R L +CD+DW +CP T+R+++ ++
Sbjct: 1266 FMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTKRSLSGWL 1325
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQHTVSRS AEAEYR+MA E+ WL LL L + ++L CD
Sbjct: 1326 VFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGMHHPKAIKLFCD 1385
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+++AL +A P+FHERTKHIE+DCHFVR+ + +GLI +V + QLAD+ TK LG Q
Sbjct: 1386 SQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQF 1445
Query: 1244 QFLLSKLG 1267
+LL+KLG
Sbjct: 1446 DYLLAKLG 1453
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 379 bits (972), Expect = e-102
Identities = 205/436 (47%), Positives = 283/436 (64%), Gaps = 6/436 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
RT++ + A++ W + QMDV+NAFL GDL+EEVYM LP GF KVCRL KSLYGLK
Sbjct: 1073 RTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQ 1132
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLS AL G+ Q D+S F+ + +++ ++++ +
Sbjct: 1133 APRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQKFK 1192
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
L F +KDLG+LKYFLGIEV R GI L+ RKY L+++S G GA+PA TP+E N
Sbjct: 1193 EYLGRCFSMKDLGKLKYFLGIEVSRGPDGIFLSQRKYALDIISDSGTLGARPAYTPLEQN 1252
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
L + DD P+L D +++L+G+L+YL TRP++S++V +LSQ
Sbjct: 1253 HHLAS----------DD-------GPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQ 1295
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ +H EAA+R++ YLK +PGQ IL+ + L +YCD+D++SCP TRR+++AYV
Sbjct: 1296 FMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYV 1355
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQ TVS S AEAEYR+M+ A+ EI WL +LLKEL I+++ P RL CD
Sbjct: 1356 VLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCD 1415
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+KAA+ IA+ P+FHERTKHIE DCH VR+ +++G+I T V + QLAD+ TK LG Q
Sbjct: 1416 SKAAISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQF 1475
Query: 1244 QFLLSKLGFSMCSNPS 1291
+L+SKLG P+
Sbjct: 1476 IYLMSKLGIQNLHTPT 1491
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 378 bits (971), Expect = e-102
Identities = 205/428 (47%), Positives = 271/428 (63%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R +++ + W L QMDVNNAFL GDL+EEVYM LP+GF + G+ KVC+L KSLYGLK
Sbjct: 898 RCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQ 957
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KL++AL + G++QS D+SLFT + ++ ++ E +
Sbjct: 958 ASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGNDNKVCEAFK 1017
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L +F +K+LGQLKY LGIEV R K G+ L+ RKY L ++ GL GA+P PME N
Sbjct: 1018 NFLDRKFGIKNLGQLKYILGIEVARGKDGLFLSQRKYALNIIKECGLLGARPVEFPMEEN 1077
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL +LND Y++L+G+LIYLT+TRPD+++ V +LSQ
Sbjct: 1078 HKLALAN-----------------GRLLNDPGMYRRLVGRLIYLTVTRPDLTYXVHVLSQ 1120
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ H +AA RV+ YLK+ PGQ I+++ L Y D+DW SCP TRR+++
Sbjct: 1121 FMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDSDWXSCPLTRRSISGCC 1180
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
+LG S ISW+ KKQ T+SRS AE EY SMA A +E+ WL LL L + P++L CD
Sbjct: 1181 VKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTWLKSLLASLGVLHDKPMKLYCD 1240
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
NKAAL IA+ P+FHERTKHIEIDCHFVREK++ G I T ++ SKLQ AD+ TK LG Q
Sbjct: 1241 NKAALHIAANPVFHERTKHIEIDCHFVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQF 1300
Query: 1244 QFLLSKLG 1267
FL SKLG
Sbjct: 1301 LFLSSKLG 1308
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 378 bits (970), Expect = e-102
Identities = 206/428 (48%), Positives = 273/428 (63%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R ++IAAS +W L QMDV+NAFL GDL+EEVYM LP GF VCRL KSLYGLK
Sbjct: 681 RAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQ 740
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KL +AL G+ QS D+SLFT + + ++ ++ +
Sbjct: 741 APRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFK 800
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L FK+KDLG LKYFLGIEV RS G+ L RKYTL+++S GL GAKP P+E N
Sbjct: 801 AYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQN 860
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+L + +L++ SY++L+G+LIYL +TRPD++++V ILSQ
Sbjct: 861 HRLGLANGE-----------------LLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQ 903
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FM P+I HWEAALRV+ YLK TPGQ IL+R L +CD+DW +CP TRR+++ ++
Sbjct: 904 FMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWL 963
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQHTVSRS AEAEYR+MA E+ WL LL L + ++L CD
Sbjct: 964 VFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGVHHPKAIKLFCD 1023
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+++AL +A P+FHERTKHIE+DCHFVR+ + +GLI +V + QLAD+ TK LG Q
Sbjct: 1024 SQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQF 1083
Query: 1244 QFLLSKLG 1267
+LL+KLG
Sbjct: 1084 DYLLAKLG 1091
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 378 bits (970), Expect = e-102
Identities = 206/428 (48%), Positives = 273/428 (63%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R ++IAAS +W L QMDV+NAFL GDL+EEVYM LP GF VCRL KSLYGLK
Sbjct: 760 RAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQ 819
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KL +AL G+ QS D+SLFT + + ++ ++ +
Sbjct: 820 APRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDSAALKTFK 879
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L FK+KDLG LKYFLGIEV RS G+ L RKYTL+++S GL GAKP P+E N
Sbjct: 880 AYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQN 939
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+L + +L++ SY++L+G+LIYL +TRPD++++V ILSQ
Sbjct: 940 HRLXLANGE-----------------LLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQ 982
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FM P+I HWEAALRV+ YLK TPGQ IL+R L +CD+DW +CP TRR+++ ++
Sbjct: 983 FMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWL 1042
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQHTVSRS AEAEYR+MA E+ WL LL L + ++L CD
Sbjct: 1043 VFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGVHHPKAIKLFCD 1102
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+++AL +A P+FHERTKHIE+DCHFVR+ + +GLI +V + QLAD+ TK LG Q
Sbjct: 1103 SQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQF 1162
Query: 1244 QFLLSKLG 1267
+LL+KLG
Sbjct: 1163 DYLLAKLG 1170
>ref|XP_004295380.1| PREDICTED: uncharacterized protein LOC101310880 [Fragaria vesca
subsp. vesca]
Length = 3881
Score = 376 bits (966), Expect = e-101
Identities = 217/424 (51%), Positives = 267/424 (62%), Gaps = 6/424 (1%)
Frame = +2
Query: 14 SIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKNI--- 184
+IAA DWPL QMDV NAFL G+L EEVYM P G+ QGE VCRL KSLYGLK
Sbjct: 2647 AIAAVRDWPLHQMDVQNAFLHGELLEEVYMLPPPGYRRQGENLVCRLHKSLYGLKQASRS 2706
Query: 185 ---KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQSTLH 355
+ S A+ G++QS D+SLFT+ +N++ I+ + L+
Sbjct: 2707 WFQRFSYAIQAIGFQQSRADYSLFTQVLDNSITVVLLYVDDMIIIGNNEEAIQNLKQFLN 2766
Query: 356 SQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELNVKLT 535
S FK+KDLG LKYFLG+EV RSK GI + RKYTL++L GL G KP++ PMEL++ LT
Sbjct: 2767 SCFKIKDLGPLKYFLGLEVARSKAGITIWQRKYTLDILEEAGLLGVKPSTVPMELDLVLT 2826
Query: 536 TVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQFMQC 715
T DTL +DP Y++LIGKLIYLTITRPDI+FAV LSQFMQ
Sbjct: 2827 TKGSDTL------------KDPA-----RYRRLIGKLIYLTITRPDITFAVNTLSQFMQE 2869
Query: 716 PKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYVGQLG 895
PK+ H + A R+L Y K PGQ +L L YCD DW CP TRR+VT Y LG
Sbjct: 2870 PKLHHLKTAHRLLQYFKSVPGQGLLFSSQSPLHLIGYCDTDWARCPLTRRSVTGYCIFLG 2929
Query: 896 DSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCDNKAA 1075
SL+SWKSKKQ TVSRS AEAEYRSMA A E+ WL LL +L + RL CDN+AA
Sbjct: 2930 QSLVSWKSKKQVTVSRSSAEAEYRSMAVAACELTWLRYLLTDLHVLHPKLARLFCDNQAA 2989
Query: 1076 LQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQHQFLL 1255
L IA+ P++HERTKHIE+DCH VRE+++ G +KT +V + Q+AD+ TK L L
Sbjct: 2990 LHIAANPVYHERTKHIELDCHTVRERIQRGEVKTAYVPTGHQIADMFTKPLRGPIFHAHL 3049
Query: 1256 SKLG 1267
SKLG
Sbjct: 3050 SKLG 3053
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 373 bits (958), Expect = e-101
Identities = 204/428 (47%), Positives = 271/428 (63%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R ++IAAS +W L QMDV+NAFL GDL+EEVYM LP GF S VCRL KSLYGLK
Sbjct: 711 RAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQ 770
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KL +AL G+ QS D+SLFT + ++ ++ +
Sbjct: 771 APRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDSAALKTFK 830
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
+ L FK+KDLG LKYFLGIEV RS G+ L RKYTL+++S GL GAKP +E N
Sbjct: 831 AYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFSIEQN 890
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
+L + +L++ SY++L+G+LIYL +TRP+++++V ILSQ
Sbjct: 891 HRLGLANGE-----------------LLSNPESYRRLVGRLIYLAVTRPNLAYSVHILSQ 933
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+I HWE ALRV+ YLK TPGQ IL+R L +CD+DW +CP TRR+++ ++
Sbjct: 934 FMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWL 993
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
LG S ISWK+KKQHTVSRS AEAEYR+MA E+ WL LL L + ++L CD
Sbjct: 994 VFLGQSHISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGVHHPKAIKLFCD 1053
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+++AL + P+FHERTKHIE+DCHFVR+ + +GLI +V + QLAD+ TK LG Q
Sbjct: 1054 SQSALHMTKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQF 1113
Query: 1244 QFLLSKLG 1267
+LL+KLG
Sbjct: 1114 DYLLAKLG 1121
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 372 bits (956), Expect = e-100
Identities = 213/429 (49%), Positives = 266/429 (62%), Gaps = 7/429 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETK-VCRLLKSLYGLK 178
R +++IAA W L QMDV NAFL GDL EEVYM LP GF QGET VCRL KSLYGLK
Sbjct: 1042 RCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFRQQGETPMVCRLNKSLYGLK 1101
Query: 179 NI------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEA 340
K S+ + G+ QS D+SLFTK S T +++ +I
Sbjct: 1102 QASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAAL 1161
Query: 341 QSTLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMEL 520
+ +LH++F++KDLGQL+YFLGIEV RS GI ++ RKYTL++L GL GAKP STPME
Sbjct: 1162 KESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLLGAKPLSTPMEE 1221
Query: 521 NVKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILS 700
N KL D +L + +Y++L+G+LIYLTITRP+IS++V ILS
Sbjct: 1222 NNKLLPTVGD-----------------LLKNPSTYRRLVGQLIYLTITRPEISYSVHILS 1264
Query: 701 QFMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAY 880
QFMQ P+ H A +L YLK PGQ + L +CDADW C TRR+VT Y
Sbjct: 1265 QFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGY 1324
Query: 881 VGQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCC 1060
L + ISWK+KKQ TVSRS E+EYR+MA E+ WL LL +LK+ S P +L C
Sbjct: 1325 CIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDLKVEHSQPAKLFC 1384
Query: 1061 DNKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQ 1240
D+KAAL IA+ P++HERTKHIEIDCH VRE+++ G I T V S QLADL TK L +
Sbjct: 1385 DSKAALHIAANPVYHERTKHIEIDCHVVRERIQSGAIVTAHVPSSCQLADLFTKPLNSSI 1444
Query: 1241 HQFLLSKLG 1267
LLSK G
Sbjct: 1445 FHSLLSKFG 1453
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 372 bits (955), Expect = e-100
Identities = 201/428 (46%), Positives = 277/428 (64%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R + +AA+ DW + QMDV+NAFL GDL EEVYM LPQGF +KVCRL KSLYGLK
Sbjct: 691 RLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQ 750
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLSSAL G+ QS D+SLF+ + + S + + +
Sbjct: 751 APRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFK 810
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
S L S F +KDLG LKYFLGIEV R+ G L+ RKY L+++S MGL GA+P++ P+E N
Sbjct: 811 SYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQN 870
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL+ TS P+L+D Y++L+G+LIYL +TRP++S++V L+Q
Sbjct: 871 HKLSL-----------STS------PLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQ 913
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ HW AA+RV+ YLK PGQ IL+ + + +CD+D+ +CP TRR++T Y
Sbjct: 914 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYF 973
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
QLGD+ ISWK+KKQ TVSRS AEAEYR+MA E++WL +L +L +S +R+ D
Sbjct: 974 VQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSD 1033
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+K+A+ ++ P+ HERTKH+E+DCHF+R+ + +G+I T FV S QLAD+LTK LG +
Sbjct: 1034 SKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEV 1093
Query: 1244 QFLLSKLG 1267
++ L KLG
Sbjct: 1094 RYFLRKLG 1101
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 372 bits (955), Expect = e-100
Identities = 201/428 (46%), Positives = 277/428 (64%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R + +AA+ DW + QMDV+NAFL GDL EEVYM LPQGF +KVCRL KSLYGLK
Sbjct: 1050 RLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQ 1109
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLSSAL G+ QS D+SLF+ + + S + + +
Sbjct: 1110 APRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFK 1169
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
S L S F +KDLG LKYFLGIEV R+ G L+ RKY L+++S MGL GA+P++ P+E N
Sbjct: 1170 SYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQN 1229
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL+ TS P+L+D Y++L+G+LIYL +TRP++S++V L+Q
Sbjct: 1230 HKLSL-----------STS------PLLSDSSRYRRLVGRLIYLVVTRPELSYSVHTLAQ 1272
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ HW AA+RV+ YLK PGQ IL+ + + +CD+D+ +CP TRR++T Y
Sbjct: 1273 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYF 1332
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
QLGD+ ISWK+KKQ TVSRS AEAEYR+MA E++WL +L +L +S +R+ D
Sbjct: 1333 VQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSD 1392
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+K+A+ ++ P+ HERTKH+E+DCHF+R+ + +G+I T FV S QLAD+LTK LG +
Sbjct: 1393 SKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEV 1452
Query: 1244 QFLLSKLG 1267
++ L KLG
Sbjct: 1453 RYFLRKLG 1460
>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
Length = 1498
Score = 372 bits (954), Expect = e-100
Identities = 209/437 (47%), Positives = 271/437 (62%), Gaps = 7/437 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETK-VCRLLKSLYGLK 178
R ++++AA+ + QMDVNNAFL GDL EE+YMS P G QGE VCRL KSLYGLK
Sbjct: 1080 RCLLALAAARGXSIHQMDVNNAFLHGDLHEEIYMSPPLGLRRQGEENLVCRLHKSLYGLK 1139
Query: 179 NI------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEA 340
K S A+ AGY QS D+SLFT++ T ++ I
Sbjct: 1140 QASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDILITGNDPVSIATT 1199
Query: 341 QSTLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMEL 520
+ LHS F +KDLG LKYFLGIEV SK+GI ++ RKY LE++ GL GA P TPME
Sbjct: 1200 KKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGLLGAAPIDTPMER 1259
Query: 521 NVKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILS 700
+KL+ K+D +L D Y++L+G+LIYLT++RPDI++AV +LS
Sbjct: 1260 GLKLSD--------KSD----------LLKDQGRYRRLVGRLIYLTVSRPDITYAVHVLS 1301
Query: 701 QFMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAY 880
+FM P+ +H EAA RV+ YLK PGQ + + L YCD+DW CP TRR+ T Y
Sbjct: 1302 RFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYCDSDWAGCPLTRRSTTGY 1361
Query: 881 VGQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCC 1060
LG SLISW+SK+Q TVS S AEAEYR+M A E+ WL LLK+L + P L C
Sbjct: 1362 CVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLKDLGVLHKEPALLYC 1421
Query: 1061 DNKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQ 1240
DNKAAL IA+ P+FHERT+HIE+DCH++R+K+++G I T VSS QLAD+LTK LG
Sbjct: 1422 DNKAALHIAANPVFHERTRHIEMDCHYIRDKIQDGSIITRHVSSAHQLADILTKPLGKEF 1481
Query: 1241 HQFLLSKLGFSMCSNPS 1291
++ KLG +P+
Sbjct: 1482 FAPMIRKLGVQDIHSPT 1498
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 372 bits (954), Expect = e-100
Identities = 200/428 (46%), Positives = 277/428 (64%), Gaps = 6/428 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETKVCRLLKSLYGLKN 181
R + +AA+ DW + QMDV+NAFL GDL EEVYM LPQGF +KVCRL KSLYGLK
Sbjct: 691 RLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQ 750
Query: 182 I------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQ 343
KLSSAL G+ QS D+SLF+ + + S + + +
Sbjct: 751 APRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFK 810
Query: 344 STLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELN 523
S L S F +KDLG LKYFLGIEV R+ G L+ RKY L+++S MGL GA+P++ P+E N
Sbjct: 811 SYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQN 870
Query: 524 VKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQ 703
KL+ TS P+L+D Y++L+G+LIYL +TRP++S++V L+Q
Sbjct: 871 HKLSL-----------STS------PLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQ 913
Query: 704 FMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYV 883
FMQ P+ HW AA+RV+ YLK PGQ IL+ + + +CD+D+ +CP TRR++T Y
Sbjct: 914 FMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYF 973
Query: 884 GQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCD 1063
QLGD+ ISWK+KKQ T+SRS AEAEYR+MA E++WL +L +L +S +R+ D
Sbjct: 974 VQLGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSD 1033
Query: 1064 NKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIAQH 1243
+K+A+ ++ P+ HERTKH+E+DCHF+R+ + +G+I T FV S QLAD+LTK LG +
Sbjct: 1034 SKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEV 1093
Query: 1244 QFLLSKLG 1267
++ L KLG
Sbjct: 1094 RYFLRKLG 1101
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 370 bits (951), Expect = e-100
Identities = 201/430 (46%), Positives = 267/430 (62%), Gaps = 8/430 (1%)
Frame = +2
Query: 2 RTIISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETK--VCRLLKSLYGL 175
R I++AA WPL Q+DV NAFL GDL EE+YM P GF +QGE+ VCRL KSLYGL
Sbjct: 967 RLFIAMAALQQWPLYQLDVKNAFLNGDLQEEIYMEQPPGFVAQGESSGLVCRLRKSLYGL 1026
Query: 176 KNI------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEE 337
K K S+ + G +S DHS+F + S T S+ I +
Sbjct: 1027 KQSPRAWFGKFSNVVQQFGMTRSEADHSVFYRHSSVGCIYLVVYVDDIVLTGSDHHGISQ 1086
Query: 338 AQSTLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPME 517
+ L F+ KDLG+L+YFLGIEV +S GI+++ RKY L++L +GL +K TPM+
Sbjct: 1087 VKQHLCQNFQTKDLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLMNSKSVDTPMD 1146
Query: 518 LNVKLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQIL 697
NVKL + + L +D Y++L+GKL YLT+TRPDISFAV ++
Sbjct: 1147 PNVKLLPNQGEPL-----------------SDPEKYRRLVGKLNYLTVTRPDISFAVSVV 1189
Query: 698 SQFMQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTA 877
SQF+ P HW A +R+L Y+K +PG+ +L + + Y DADW P+ RR+ +
Sbjct: 1190 SQFLNSPCEDHWNAVIRILKYIKGSPGKGLLYGHNNHTKVVCYSDADWAGSPSDRRSTSG 1249
Query: 878 YVGQLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLC 1057
Y +GD+LISWKSKKQ V+RS AEAEYR+MA A E+IWL +LLKEL+ + L
Sbjct: 1250 YCVSIGDNLISWKSKKQSVVARSSAEAEYRAMASATCELIWLKQLLKELQFGDVTQMTLI 1309
Query: 1058 CDNKAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLGIA 1237
CDN+AAL I+S P+FHERTKHIEIDCHF+REK+ G IKTEFV+S QLAD+ TK L
Sbjct: 1310 CDNQAALHISSNPVFHERTKHIEIDCHFIREKIISGDIKTEFVNSNNQLADIFTKSLRGP 1369
Query: 1238 QHQFLLSKLG 1267
+ ++ +KLG
Sbjct: 1370 RIDYICNKLG 1379
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 369 bits (946), Expect = 2e-99
Identities = 201/415 (48%), Positives = 264/415 (63%), Gaps = 7/415 (1%)
Frame = +2
Query: 8 IISIAASHDWPLLQMDVNNAFLQGDLDEEVYMSLPQGFHSQGETK-VCRLLKSLYGLKNI 184
++++AA+ W L Q+DVNNAFL GDL EE+YMS P G QGE VCRL KSLYGLK
Sbjct: 1103 LLALAAARRWSLHQLDVNNAFLHGDLHEEIYMSPPPGLRRQGEENLVCRLHKSLYGLKQA 1162
Query: 185 ------KLSSALLDAGYRQSSYDHSLFTKQSRXXXXXXXXXXXXXXXTRSNKQLIEEAQS 346
K S A+ AGY QS D+SLFT+ T ++ I +
Sbjct: 1163 SRQWFSKFSKAIQAAGYVQSRADYSLFTRIQGKSFTALLIYVDDILITGNDSMSIAAIKK 1222
Query: 347 TLHSQFKVKDLGQLKYFLGIEVLRSKHGILLN*RKYTLELLSAMGLGGAKPASTPMELNV 526
LHSQF++KDLG LKYFLGIEV SK+GI ++ RKY LE++ GL GA P TPME +
Sbjct: 1223 FLHSQFRLKDLGDLKYFLGIEVSSSKNGIFISQRKYALEIIKDAGLLGAAPIDTPMERGL 1282
Query: 527 KLTTVEYDTLLKKTDDTSYKKIEDPILNDIHSYQQLIGKLIYLTITRPDISFAVQILSQF 706
+L+ K+D +L D Y++L+G+LIYLT++RPDI+++V +LS+F
Sbjct: 1283 RLSD--------KSD----------LLKDPGHYRRLVGRLIYLTVSRPDITYSVHVLSRF 1324
Query: 707 MQCPKISHWEAALRVLGYLKRTPGQ*ILMRRSPIKCLTLYCDADWESCPNTRRAVTAYVG 886
M P+ H EAALRV+ YLK PGQ + + L YCD+DW CP TRR+ T Y
Sbjct: 1325 MHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSDWAGCPITRRSTTGYCV 1384
Query: 887 QLGDSLISWKSKKQHTVSRSPAEAEYRSMADAVAEIIWLVELLKELKISISIPVRLCCDN 1066
LG SL+SW+SK+Q TVS S AEAEYR+M A E+ WL LL++L + P L CDN
Sbjct: 1385 FLGPSLVSWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLRDLGVLHREPSLLYCDN 1444
Query: 1067 KAALQIASIPIFHERTKHIEIDCHFVREKLKEGLIKTEFVSSKLQLADLLTKGLG 1231
KAAL I + P+FHERT+HIE+DCH++R+K+++G + T FV+S QLAD+LTK LG
Sbjct: 1445 KAALHITANPVFHERTRHIEMDCHYIRDKIQDGSVATRFVNSAHQLADVLTKALG 1499