BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034322
         (656 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-106
ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containi...   386   e-105
gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus pe...   307   2e-81
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   294   2e-77
emb|CBI28908.3| unnamed protein product [Vitis vinifera]              293   3e-77
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...   291   9e-77
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...   291   9e-77
ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutr...   289   6e-76
ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containi...   288   8e-76
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...   288   1e-75
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]           288   1e-75
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...   286   3e-75
ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Caps...   285   8e-75
ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citr...   280   4e-73
ref|XP_006371589.1| pentatricopeptide repeat-containing family p...   276   4e-72
ref|XP_002329409.1| predicted protein [Populus trichocarpa]           272   7e-71
gb|EOY09328.1| Pentatricopeptide repeat (PPR-like) superfamily p...   264   2e-68
gb|EOX99363.1| Pentatricopeptide repeat (PPR-like) superfamily p...   258   8e-67
ref|XP_006850819.1| hypothetical protein AMTR_s00025p00124790 [A...   227   3e-57
gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis]     226   5e-57

>ref|XP_006366006.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565401005|ref|XP_006366007.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565401007|ref|XP_006366008.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X3 [Solanum tuberosum]
           gi|565401009|ref|XP_006366009.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X4 [Solanum tuberosum]
           gi|565401011|ref|XP_006366010.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like isoform X5 [Solanum tuberosum]
          Length = 711

 Score =  390 bits (1003), Expect = e-106
 Identities = 188/218 (86%), Positives = 200/218 (91%)
 Frame = +2

Query: 2   PKRVFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCC 181
           PK V+T +N+PPPEW+QPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSP M+ NLD YCC
Sbjct: 105 PKWVYTGSNLPPPEWVQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPLMEQNLDVYCC 164

Query: 182 KFLIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQL 361
           KFLIKLSPSFVAY+LKSD L+GKPD A RFFYWAGKQKGYA NCEC VFL++ILSASR+L
Sbjct: 165 KFLIKLSPSFVAYVLKSDYLTGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILSASREL 224

Query: 362 DRINHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFL 541
           DRI HVFSEFK KG LMNV  VNSLIRSFGELGMVE LL+VWR+MKEN IEPSLYTYNFL
Sbjct: 225 DRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFL 284

Query: 542 MNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           MNGLVNSMFIES ERVFEVMESGKVNPDIVTYNTMIKG
Sbjct: 285 MNGLVNSMFIESAERVFEVMESGKVNPDIVTYNTMIKG 322


>ref|XP_004248470.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Solanum lycopersicum]
          Length = 711

 Score =  386 bits (992), Expect = e-105
 Identities = 185/218 (84%), Positives = 199/218 (91%)
 Frame = +2

Query: 2   PKRVFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCC 181
           PK VFT +N+PPPEW+QPF+DLSDLVTDRKDLKPSPWVSQILNLLDNSP M+ NLD YCC
Sbjct: 105 PKWVFTGSNLPPPEWVQPFVDLSDLVTDRKDLKPSPWVSQILNLLDNSPLMEQNLDVYCC 164

Query: 182 KFLIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQL 361
           KFLIKLSPSFVAY+LKSD L+GKPD A RFFYWAGKQKGYA NCEC VFL++ILSAS +L
Sbjct: 165 KFLIKLSPSFVAYVLKSDYLTGKPDIAFRFFYWAGKQKGYAHNCECYVFLVKILSASCEL 224

Query: 362 DRINHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFL 541
           DRI HVFSEFK KG LMNV  VNSLIRSFGELGMVE LL+VWR+MKEN IEPSLYTYNFL
Sbjct: 225 DRIKHVFSEFKHKGFLMNVAAVNSLIRSFGELGMVEELLFVWRQMKENGIEPSLYTYNFL 284

Query: 542 MNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           MNGLVNSMF+ES ERVFEVMESGKVNPDIVTYNT+IKG
Sbjct: 285 MNGLVNSMFVESAERVFEVMESGKVNPDIVTYNTIIKG 322


>gb|EMJ18185.1| hypothetical protein PRUPE_ppa002596mg [Prunus persica]
          Length = 654

 Score =  307 bits (786), Expect = 2e-81
 Identities = 149/218 (68%), Positives = 176/218 (80%)
 Frame = +2

Query: 2   PKRVFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCC 181
           P+ VFTN+ +PPPEW++PF D+SD+V++ +D  PSPWV+QILNLLD S  M+ NLD+YC 
Sbjct: 49  PRWVFTNS-LPPPEWVEPFNDVSDIVSNPQDFDPSPWVAQILNLLDGSQKMEANLDSYCH 107

Query: 182 KFLIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQL 361
            FLIKLSP+FVAY+LKS  L GKP+ ALRFF WAGKQK Y    EC V LI +LS+S  L
Sbjct: 108 TFLIKLSPNFVAYVLKSAELRGKPETALRFFAWAGKQKKYHHKLECYVSLIDLLSSSGDL 167

Query: 362 DRINHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFL 541
           DRI +V +E K+K  LMN    NSLI+SFG LGMV+ LLWVWR+MKEN IEPSLYTYNFL
Sbjct: 168 DRIRYVLAELKEKNFLMNSAAANSLIKSFGCLGMVDELLWVWRRMKENGIEPSLYTYNFL 227

Query: 542 MNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           +NGLVNSMFIES ERVFEVME GK+ PD+VTYNTMIKG
Sbjct: 228 VNGLVNSMFIESAERVFEVMEGGKIVPDVVTYNTMIKG 265



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
 Frame = +2

Query: 197 LSPSFVAYILKSDNL--SGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           L P  V Y +  + L  SG+ + A+ +F +  +  G A N      LI+ L  + +LD  
Sbjct: 392 LKPDVVTYGVVVNGLCKSGRVEEAMEYFQFC-EGSGMAVNAMLYSSLIEGLGKAGRLDEA 450

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             +F +  +KG   +    N+LI +  + G  +  L +++KM+E   + ++YTY  L++G
Sbjct: 451 ERLFEKMIEKGCPQDSYCYNALIDALAKGGKTDEALALFKKMEEEGCDQTVYTYTILISG 510

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           L      E   +++++M    + P   ++  +  G
Sbjct: 511 LFKEHKNEEALKLWDMMIDQGITPTAASFRALSIG 545


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  294 bits (752), Expect = 2e-77
 Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVT-DRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKF 187
           VFT+ ++PPPEWI PF+DLSD+ +   +DLKPSPWV+QIL LLD S  M+ NLD +C  F
Sbjct: 43  VFTSNSLPPPEWIDPFVDLSDVASRTHQDLKPSPWVNQILALLDGSSNMESNLDTFCHMF 102

Query: 188 LIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDR 367
           LIKLSPSFV++IL+S  L  KPD A+RFF WAGKQK Y  N EC V LI +L+ +  LD 
Sbjct: 103 LIKLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDS 162

Query: 368 INHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMN 547
           +  VFS+FK+ GL+M V   NSLI+SFG LGMVE +LWVWR+MKEN IEPSL++YNFL+N
Sbjct: 163 VKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVN 222

Query: 548 GLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           GLVNS FIES ERVFEVME+GK+ PD+VTYNTMIKG
Sbjct: 223 GLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKG 258


>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  293 bits (750), Expect = 3e-77
 Identities = 140/207 (67%), Positives = 165/207 (79%)
 Frame = +2

Query: 35  PPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFLIKLSPSFV 214
           PPEW++P  DLSDL ++ +  +PSPWV+QIL LLD S  M+ NLD+YC KFLIKLSP+FV
Sbjct: 64  PPEWVEPLYDLSDLASNPQP-QPSPWVNQILKLLDGSVNMESNLDSYCSKFLIKLSPNFV 122

Query: 215 AYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRINHVFSEFK 394
           A++LKSD + GKPD A RFF+WAGKQK Y    EC V LI +LS S   DR+  +F EFK
Sbjct: 123 AFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFK 182

Query: 395 DKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNGLVNSMFIE 574
           +KG LM V   NSLIRSFG LGMVE LLWVWR+MKE+ IEPSLYT+NFL+NGLVNSMFIE
Sbjct: 183 EKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIE 242

Query: 575 STERVFEVMESGKVNPDIVTYNTMIKG 655
           S ERVFEVME GK+ PD+V+YNTMIKG
Sbjct: 243 SAERVFEVMECGKIGPDVVSYNTMIKG 269


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  291 bits (746), Expect = 9e-77
 Identities = 137/215 (63%), Positives = 170/215 (79%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VFTN  +PPPEWI+PF+D+SD+++  + L PSPWV+QILNLLD S  M+HNLD++C KF 
Sbjct: 50  VFTNTLLPPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFF 109

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           +KLSP+FV ++L+S  L  KP+ A+RFF+WAGKQK Y    EC V LI++L+ S  L +I
Sbjct: 110 VKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 169

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             VF E KD+GLLM     NSLI+SFG LG+VE LLWVWR+MKEN I+PSLYTYNFL+NG
Sbjct: 170 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 229

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LVNSMFIES E+VFEVM+ GK+ PD VTYN MIKG
Sbjct: 230 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKG 264


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  291 bits (746), Expect = 9e-77
 Identities = 137/215 (63%), Positives = 170/215 (79%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VFTN  +PPPEWI+PF+D+SD+++  + L PSPWV+QILNLLD S  M+HNLD++C KF 
Sbjct: 48  VFTNTLLPPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFF 107

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           +KLSP+FV ++L+S  L  KP+ A+RFF+WAGKQK Y    EC V LI++L+ S  L +I
Sbjct: 108 VKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 167

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             VF E KD+GLLM     NSLI+SFG LG+VE LLWVWR+MKEN I+PSLYTYNFL+NG
Sbjct: 168 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 227

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LVNSMFIES E+VFEVM+ GK+ PD VTYN MIKG
Sbjct: 228 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKG 262


>ref|XP_006418224.1| hypothetical protein EUTSA_v10007014mg [Eutrema salsugineum]
           gi|557095995|gb|ESQ36577.1| hypothetical protein
           EUTSA_v10007014mg [Eutrema salsugineum]
          Length = 661

 Score =  289 bits (739), Expect = 6e-76
 Identities = 139/215 (64%), Positives = 169/215 (78%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VF+++++PPPEWI+PF D+SDLV    +L+PSPWVSQILNLLD S  M+ NLD +C KFL
Sbjct: 52  VFSSSSLPPPEWIEPFNDVSDLVKSTGNLQPSPWVSQILNLLDGSDSMESNLDGFCRKFL 111

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           IKLSP+FVA++LKSD +   P  A RFF WAGKQK Y    EC V L+ +L+ ++ +DRI
Sbjct: 112 IKLSPNFVAFVLKSDEIREIPGVAWRFFCWAGKQKKYTHKLECYVSLVDVLALAKDVDRI 171

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             V SE +     MNV   NSLI+SFG+LGMVE LLWVWRKMKEN IEP+LYTYNFLMNG
Sbjct: 172 RFVCSEIRRFEFPMNVSAANSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LV+SMFI+S ERVFEVME G++ PD+VTYNTMIKG
Sbjct: 232 LVSSMFIDSAERVFEVMEGGRIKPDVVTYNTMIKG 266


>ref|XP_004306013.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  288 bits (738), Expect = 8e-76
 Identities = 140/211 (66%), Positives = 165/211 (78%), Gaps = 1/211 (0%)
 Frame = +2

Query: 26  NIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDN-SPPMKHNLDAYCCKFLIKLS 202
           ++PPPEW++PF D+SD+++      PSPWV QILNLLDN SP M+HNLD+YC KFLIKLS
Sbjct: 57  SLPPPEWVEPFHDVSDVISSPHRFDPSPWVPQILNLLDNNSPQMEHNLDSYCRKFLIKLS 116

Query: 203 PSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRINHVF 382
           P+FVAY+LKSDNL  KP+ ALRFF WA KQ  Y    EC V LI+IL    +LD +  V 
Sbjct: 117 PNFVAYVLKSDNLRDKPETALRFFSWASKQHKYHHKLECYVCLIEILCLCGELDSVKCVV 176

Query: 383 SEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNGLVNS 562
           +E ++  LLMN    NSL++SFG +GMVE LLWVWR MKEN IEPSL+TYNFL+NGLVNS
Sbjct: 177 NELREMRLLMNANAANSLVKSFGSVGMVEELLWVWRGMKENGIEPSLFTYNFLVNGLVNS 236

Query: 563 MFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           MFIES ERVFEVME GK+ PDIVTYNTMIKG
Sbjct: 237 MFIESAERVFEVMEGGKIVPDIVTYNTMIKG 267


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score =  288 bits (737), Expect = 1e-75
 Identities = 137/215 (63%), Positives = 169/215 (78%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VF ++++PPPEWI+PF D+SDLV   ++L PSPWVSQILNLLD S  M+ NLD +C KFL
Sbjct: 52  VFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFL 111

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           IKLSP+FV+++LKSD +  KPD A  FF W+ KQK Y  N EC V L+ +L+ ++ +DRI
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             V SE K     M V   N+LI+SFG+LGMVE LLWVWRKMKEN IEP+LYTYNFLMNG
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LV++MF++S ERVFEVMESG++ PDIVTYNTMIKG
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 266


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  288 bits (737), Expect = 1e-75
 Identities = 137/215 (63%), Positives = 169/215 (78%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VF ++++PPPEWI+PF D+SDLV   ++L PSPWVSQILNLLD S  M+ NLD +C KFL
Sbjct: 34  VFNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFL 93

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           IKLSP+FV+++LKSD +  KPD A  FF W+ KQK Y  N EC V L+ +L+ ++ +DRI
Sbjct: 94  IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 153

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             V SE K     M V   N+LI+SFG+LGMVE LLWVWRKMKEN IEP+LYTYNFLMNG
Sbjct: 154 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 213

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LV++MF++S ERVFEVMESG++ PDIVTYNTMIKG
Sbjct: 214 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKG 248


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score =  286 bits (733), Expect = 3e-75
 Identities = 135/215 (62%), Positives = 170/215 (79%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VF ++++PPPEWI+PF D+SDLV   ++L+PSPWVSQILNLLD S  M+ NLD +C KFL
Sbjct: 52  VFNSSSLPPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSASMESNLDGFCRKFL 111

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           IKLSP+FV+++LKSD +  KPD A  FF W+ KQK Y  N EC V L+ +L+ ++ +DRI
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             + SE +     M V   NSLI+SFG+LGMVE LLWVWRKMKEN IEP+LYTYNFLMNG
Sbjct: 172 RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LV++MF++S ERVFEVMESG++ PD+VTYNTMIKG
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKG 266


>ref|XP_006306944.1| hypothetical protein CARUB_v10008524mg [Capsella rubella]
           gi|482575655|gb|EOA39842.1| hypothetical protein
           CARUB_v10008524mg [Capsella rubella]
          Length = 663

 Score =  285 bits (729), Expect = 8e-75
 Identities = 135/215 (62%), Positives = 168/215 (78%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFL 190
           VF + ++PPPEW++PF D+SDLV   ++L+PSPWVSQILNLLD S  M+ NLD +C KFL
Sbjct: 53  VFNSISLPPPEWVEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSDSMESNLDGFCRKFL 112

Query: 191 IKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           IKLSP+FV+++L SD +  KP  A RFF WAGKQK Y  N EC V L+ +L+ ++ +DRI
Sbjct: 113 IKLSPNFVSFVLNSDEIQEKPIIAWRFFGWAGKQKKYWHNLECYVSLVDVLALAKDVDRI 172

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             + SE +     M V   N+LI+SFG+LGMVE LLWVWRKMKEN IEP+LYTYNFLMNG
Sbjct: 173 RFLCSEIRKFEFPMTVAAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 232

Query: 551 LVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           LV+SMFI+S ERVF VMESG++ PD+VTYNTMIKG
Sbjct: 233 LVSSMFIDSAERVFGVMESGRIKPDVVTYNTMIKG 267


>ref|XP_006447324.1| hypothetical protein CICLE_v10014552mg [Citrus clementina]
           gi|568877202|ref|XP_006491635.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Citrus sinensis]
           gi|557549935|gb|ESR60564.1| hypothetical protein
           CICLE_v10014552mg [Citrus clementina]
          Length = 650

 Score =  280 bits (715), Expect = 4e-73
 Identities = 134/210 (63%), Positives = 166/210 (79%)
 Frame = +2

Query: 26  NIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFLIKLSP 205
           + PPPEW++PF D+SDLV+  ++L PSPWV QILNLLD S  M+ NLD++C KFLIKLSP
Sbjct: 52  SFPPPEWVEPFNDVSDLVSCPQNLNPSPWVRQILNLLDGSSDMEANLDSFCRKFLIKLSP 111

Query: 206 SFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRINHVFS 385
           +FV+++L++ ++S +P+  LR F WA +QK Y+ N EC + LI  L+    +DR+  VF+
Sbjct: 112 NFVSFVLRNHDVSKRPNVGLRLFTWAARQKKYSHNLECYISLIDCLALCGDVDRVRLVFN 171

Query: 386 EFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNGLVNSM 565
           E K+KG LM V   NSLI+SFG LGMVE LLWVWR MKEN IEPSLYTYNFLMNGLVNSM
Sbjct: 172 ELKEKGFLMTVSAANSLIKSFGGLGMVEELLWVWRSMKENGIEPSLYTYNFLMNGLVNSM 231

Query: 566 FIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           FIES+E VF+VME+GKV PD VTYNTMIKG
Sbjct: 232 FIESSELVFKVMENGKVGPDGVTYNTMIKG 261


>ref|XP_006371589.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550317468|gb|ERP49386.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 659

 Score =  276 bits (706), Expect = 4e-72
 Identities = 136/218 (62%), Positives = 169/218 (77%), Gaps = 3/218 (1%)
 Frame = +2

Query: 11  VFTNAN-IPPPEWIQPFIDLSDLVTDR-KDLKPSPWVSQILNLLDNSP-PMKHNLDAYCC 181
           VFT++N +PPPEWI+PF DLSD+ +   +DLKPSPWV QI++LL + P  M+  LD +C 
Sbjct: 53  VFTDSNYLPPPEWIEPFNDLSDIASKPPQDLKPSPWVHQIMSLLLDGPVDMESRLDLFCN 112

Query: 182 KFLIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQL 361
           KFLIKLSP+FV+++LKS  L  +PD AL+FF WAGKQK Y  N +C V  I +L+ +  L
Sbjct: 113 KFLIKLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDL 172

Query: 362 DRINHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFL 541
           D +  VF +F+  G LMNV   NSLI+SFG LGMVE LLWVWR MKEN +EPSL+TYNFL
Sbjct: 173 DNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFL 232

Query: 542 MNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           +NGLVNS+FIES ERV EVME+GK+ PD+VTYNTMIKG
Sbjct: 233 LNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKG 270


>ref|XP_002329409.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  272 bits (695), Expect = 7e-71
 Identities = 132/211 (62%), Positives = 163/211 (77%), Gaps = 2/211 (0%)
 Frame = +2

Query: 29  IPPPEWIQPFIDLSDLVTDR-KDLKPSPWVSQILNLLDNSP-PMKHNLDAYCCKFLIKLS 202
           +PPPEWI+PF DLSD+ +   +DLKPSPWV QI++LL + P  M+  LD +C KFLIKLS
Sbjct: 1   LPPPEWIEPFNDLSDIASKPPQDLKPSPWVHQIMSLLLDGPVDMESRLDLFCNKFLIKLS 60

Query: 203 PSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRINHVF 382
           P+FV+++LKS  L  +PD AL+FF WAGKQK Y  N +C V  I +L+ +  LD +  VF
Sbjct: 61  PNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVF 120

Query: 383 SEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNGLVNS 562
            +F+  G LMNV   NSLI+SFG LGMVE LLWVWR MKEN +EPSL+TYNFL+NGLVNS
Sbjct: 121 CKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNS 180

Query: 563 MFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           +FIES ERV EVME+GK+ PD+VTYNTMIKG
Sbjct: 181 VFIESAERVLEVMENGKIGPDVVTYNTMIKG 211


>gb|EOY09328.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 654

 Score =  264 bits (674), Expect = 2e-68
 Identities = 124/216 (57%), Positives = 166/216 (76%), Gaps = 1/216 (0%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLV-TDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKF 187
           +FT + +PPPEWI+PF ++S L  T  +DL+PSPWVS+I+NLLD    M+ NLD++C KF
Sbjct: 50  IFTPSYLPPPEWIEPFFNVSGLASTFPQDLQPSPWVSKIVNLLDGCSNMESNLDSFCHKF 109

Query: 188 LIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDR 367
           LI+LSP+FVA++L S  +  KPD ALRFF WA KQK Y    EC V +I +L+ +  L +
Sbjct: 110 LIQLSPNFVAFVLASAEVQNKPDVALRFFAWAAKQKKYTHKLECYVSMINVLALANDLVK 169

Query: 368 INHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMN 547
           +  +F + K+ G++M +   NSLI++F  LGMVE LLWVWR+MKEN+IEPSLYT+N L+N
Sbjct: 170 VRFLFGQLKEMGIVMTMSSANSLIKNFVGLGMVEELLWVWRRMKENEIEPSLYTFNLLLN 229

Query: 548 GLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           GLVNSMFIES E+VF+VME+ K+ PD+V+YNTMIKG
Sbjct: 230 GLVNSMFIESAEQVFKVMENSKIRPDVVSYNTMIKG 265


>gb|EOX99363.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 621

 Score =  258 bits (660), Expect = 8e-67
 Identities = 122/216 (56%), Positives = 163/216 (75%), Gaps = 1/216 (0%)
 Frame = +2

Query: 11  VFTNANIPPPEWIQPFIDLSDLVTD-RKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKF 187
           +FT +N+PPPEWI+PF  +S L +   +DL+PSPWVS+I+NLLD S  M+ NL ++C KF
Sbjct: 51  IFTPSNLPPPEWIEPFFKVSGLASIFPRDLQPSPWVSKIVNLLDGSSNMELNLYSFCHKF 110

Query: 188 LIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDR 367
            I+LSP+FVA++L S  +  KPD ALRF  WA KQK Y    EC V +I +L+ +  L +
Sbjct: 111 SIQLSPNFVAFVLASVEVQNKPDVALRFLTWAAKQKKYTHKLECYVSMINVLALANDLAK 170

Query: 368 INHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMN 547
           +  +F + K+ G +M +   NSLI++ G LGMVE LLWVWR+MKEN+IEPSLY +NFL+N
Sbjct: 171 VRFLFGQLKEMGSVMTMSSANSLIKNCGGLGMVEELLWVWRRMKENEIEPSLYAFNFLLN 230

Query: 548 GLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           GLVNSMF+ESTE+VF+VME+ K+ PD+V YNTMIKG
Sbjct: 231 GLVNSMFVESTEQVFKVMENSKIRPDVVNYNTMIKG 266


>ref|XP_006850819.1| hypothetical protein AMTR_s00025p00124790 [Amborella trichopoda]
           gi|548854490|gb|ERN12400.1| hypothetical protein
           AMTR_s00025p00124790 [Amborella trichopoda]
          Length = 682

 Score =  227 bits (578), Expect = 3e-57
 Identities = 115/233 (49%), Positives = 160/233 (68%), Gaps = 19/233 (8%)
 Frame = +2

Query: 14  FTNANIPPPEWIQPFIDLSDLVTDRKDLKPSPWVSQILNLLDNSPPMKHNLDAYCCKFLI 193
           + + ++P  EWI+P++D+SDLV + K+ KPSPW+ +++ LLD SP ++  LD +C KFLI
Sbjct: 61  YFSTSLPAREWIEPYVDISDLVENPKNFKPSPWIEKVIELLDGSPDLESRLDDFCRKFLI 120

Query: 194 KLSPSFVAYILKS-DNLSGK-----------------PDNALRFFYWAGKQKGYARNCEC 319
           KLSP+FV +ILK+ +N S +                 P+ A+RFF WAG+Q+ +  N E 
Sbjct: 121 KLSPTFVDHILKTLENQSSRKGLEIQKSPNTLEIRKSPEIAIRFFKWAGRQRKFIHNIES 180

Query: 320 CVFLIQILSASRQLDRINHVFSEFK-DKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKM 496
            V LI  L++S + + I+ +  EFK   G+ ++    NSLI+SFG  GMVE LLWVW+KM
Sbjct: 181 FVSLINFLASSGEFNDIHSIAQEFKVQNGVKLSAFASNSLIKSFGIAGMVEDLLWVWKKM 240

Query: 497 KENDIEPSLYTYNFLMNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           KEN IEPSL+TYN LM+GLVN+ +IES  +VFEVM+SGK  PD VTYN +IKG
Sbjct: 241 KENKIEPSLFTYNCLMDGLVNASYIESAIQVFEVMDSGKKAPDTVTYNILIKG 293



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
 Frame = +2

Query: 197 LSPSFVAYILKSDNL--SGKPDNALRFFYWAGKQKGYARNCECCVFLIQILSASRQLDRI 370
           L P  V + +    L  +GK + A   F    ++ G A N      LI  L  + +L   
Sbjct: 420 LEPDEVTHSVMISTLCKAGKVEQATEHFVMC-REMGLALNSISYSSLINGLGKASKLMEA 478

Query: 371 NHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDIEPSLYTYNFLMNG 550
             +F E  D G + +    NSL+ ++G+ G+V+  L ++++M+     P++YTY  L+NG
Sbjct: 479 EKLFEEMVDTGCIRDSYCYNSLMDAYGKAGLVDKALDLFKEMQSEGCAPTVYTYTILING 538

Query: 551 LVNSMFIESTERVFEVMESGKVNP 622
           L      E   +++++M    V P
Sbjct: 539 LFREHKNEEALKIWDMMIDKGVTP 562


>gb|EXB62273.1| hypothetical protein L484_022161 [Morus notabilis]
          Length = 557

 Score =  226 bits (576), Expect = 5e-57
 Identities = 112/168 (66%), Positives = 128/168 (76%)
 Frame = +2

Query: 152 MKHNLDAYCCKFLIKLSPSFVAYILKSDNLSGKPDNALRFFYWAGKQKGYARNCECCVFL 331
           M+ NLD +C  FLIKLSP+FV+++L S  L  KPD ALRFFYWAGKQK Y +  EC V L
Sbjct: 1   MEANLDTFCKTFLIKLSPNFVSFVLNSRELLRKPDIALRFFYWAGKQKKYNQKLECYVSL 60

Query: 332 IQILSASRQLDRINHVFSEFKDKGLLMNVVVVNSLIRSFGELGMVEALLWVWRKMKENDI 511
           I++LS    LD    VFSE +    LMN    NSLI+SFG +GMVE LLWVWR+MKEN I
Sbjct: 61  IELLSLCGDLDCARRVFSELEGMSFLMNASSANSLIKSFGSVGMVEELLWVWRQMKENGI 120

Query: 512 EPSLYTYNFLMNGLVNSMFIESTERVFEVMESGKVNPDIVTYNTMIKG 655
           +PSLYTYNFLMNGLVNSMFIES ERVFE ME+GKV PDIVTYNT+ KG
Sbjct: 121 DPSLYTYNFLMNGLVNSMFIESAERVFEAMENGKVEPDIVTYNTLFKG 168