BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034302
         (1354 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266...   261   e-109
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   202   3e-91
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   211   1e-89
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   193   1e-87
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   193   2e-87
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   187   1e-86
ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonin...   236   2e-85
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   187   5e-85
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   208   7e-85
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   208   7e-85
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   192   5e-84
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   193   5e-84
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   202   6e-84
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   192   7e-84
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   206   1e-83
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   190   4e-83
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   197   5e-83
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   192   1e-82
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   196   1e-82
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]         191   3e-82

>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
            lycopersicum]
          Length = 1537

 Score =  261 bits (668), Expect(2) = e-109
 Identities = 126/229 (55%), Positives = 172/229 (75%)
 Frame = -3

Query: 689  MLQMPEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLG 510
            +L   +GVLI+QRKF  DL+ E+        + PLDPT KL     VP P+PT Y++L+G
Sbjct: 1262 ILDTTDGVLISQRKFTLDLLKEYDCFNYTPLSSPLDPTVKLKAKEGVPLPDPTFYRKLIG 1321

Query: 509  QLNFLTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLL 330
            +LNFLT+  LD++F+VQ LSQ+MQ P   HLQAAYH LRYL+ +  LG+ ++ +P   + 
Sbjct: 1322 KLNFLTNTRLDIAFSVQHLSQFMQDPRAPHLQAAYHLLRYLKQDTTLGVQLSKNPDCTVQ 1381

Query: 329  GFYDAD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISW 150
             F D+D A+CSD+RKS+SG+ + LG SP+SWKSKKQ  +SLSSAEAEYRS+R++V E++W
Sbjct: 1382 AFCDSDWASCSDSRKSVSGYLVLLGNSPISWKSKKQETVSLSSAEAEYRSLRKVVGELTW 1441

Query: 149  IVCLLSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            +  L+++L VS S PIS++CD+Q+AIHIA+  VFHE TKHIE+DCHFVR
Sbjct: 1442 LHRLITELTVSISSPISVYCDSQSAIHIARNPVFHERTKHIEVDCHFVR 1490



 Score =  161 bits (407), Expect(2) = e-109
 Identities = 80/155 (51%), Positives = 108/155 (69%)
 Frame = -1

Query: 1153 TGTISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSH 974
            T   SPVVKM  ++ L++  VK+   ++QLDVN AFLHGDL EEV+M  PPGL   +   
Sbjct: 1107 TEAYSPVVKMTTVRTLIACAVKKGWSMFQLDVNNAFLHGDLHEEVYMKLPPGLEVPNSEL 1166

Query: 973  VYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDIL 794
            V +L+KSLYGLK  SRQWY++L+ AL +R +S S  D+SLF++   +L   V VYVDD++
Sbjct: 1167 VCKLKKSLYGLKQASRQWYSKLTEALSSRGYSHSQFDHSLFYRKEGSLAVFVAVYVDDVI 1226

Query: 793  LTENNQAEITDLKVFLNFEFKIEDLGVANYFLGME 689
            LT  +  EI  LKV+L+  FKI+DLG  +YFLG+E
Sbjct: 1227 LTGTDTTEIAQLKVYLDNTFKIKDLGRLHYFLGLE 1261


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  202 bits (514), Expect(3) = 3e-91
 Identities = 101/224 (45%), Positives = 144/224 (64%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            +G+++ QRK+A +L+ +   +G + S  P++ +  LT        + + Y+RL+G+L +L
Sbjct: 1207 QGIVLCQRKYALELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYRRLVGRLIYL 1266

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
            T    DL + V  LSQ+M +P   HL AAY  LRY++  P  G+F+ S   L+L  + DA
Sbjct: 1267 TITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDA 1326

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D A C D R+S +G+ +  G +P+SWK+KKQ  +S SSAEAEYRSM     EI+W+  LL
Sbjct: 1327 DWARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLL 1386

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            +DL V+ +  + L CDNQAAIHIA   VFHE TKHIE+DCH VR
Sbjct: 1387 ADLNVNHAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVR 1430



 Score =  140 bits (353), Expect(3) = 3e-91
 Identities = 70/156 (44%), Positives = 100/156 (64%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV K+  ++ L+S+   +   L+QLDVN AFL+GDL E+V+M  PPG        V 
Sbjct: 1049 TFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHRVC 1108

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            +L KSLYGLK  SRQW+ +LS+AL    F  S +DYSLF ++T+   + + VYVDD++L 
Sbjct: 1109 KLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDVILA 1168

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+  +I + K FL   FK++D+G   YFLG+E  R
Sbjct: 1169 GNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVAR 1204



 Score = 42.7 bits (99), Expect(3) = 3e-91
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -2

Query: 1254 QAAVHEGWRATMDTEIEAFKSNSTWEVIPLPPEKQ 1150
            QA +   WR  M+TEI+A ++N TW ++PLP  K+
Sbjct: 974  QAVLDSRWREAMNTEIQALQANKTWSLVPLPSHKK 1008


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  211 bits (536), Expect(3) = 1e-89
 Identities = 104/225 (46%), Positives = 148/225 (65%)
 Frame = -3

Query: 677  PEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNF 498
            PEG+ ++QRK+A D+I +  ++G R +  PL+    L  D      +P  Y+RL+G+L +
Sbjct: 1229 PEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLY 1288

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            L H   +LS++V  L+Q+MQ+P   H  AA   +RYL+ +P  G+ +N+DP L L  + D
Sbjct: 1289 LLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCD 1348

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            +D  +C   R+SIS + + LGGSP+SWK+KKQ  +S SSAEAEYR+M   + EI W+  L
Sbjct: 1349 SDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKL 1408

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            L +LG+  S P  L+CD++AAIHIA   VFHE TKHIE DCH VR
Sbjct: 1409 LKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVR 1453



 Score =  133 bits (335), Expect(3) = 1e-89
 Identities = 70/156 (44%), Positives = 94/156 (60%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PVV+M  ++ L+      Q  +YQ+DV+ AFLHGDL EEV+M  PPG   SHP  V 
Sbjct: 1072 TFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVC 1131

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+ +LS +L    F  S  DYSLF  +   +   V +YVDD+L+ 
Sbjct: 1132 RLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDDLLIC 1191

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+   +   K +L+  F ++DLG   YFLG+E  R
Sbjct: 1192 GNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSR 1227



 Score = 35.8 bits (81), Expect(3) = 1e-89
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 1233 WRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            W   M TE++A + N TW+++ LPP K A
Sbjct: 1004 WNDAMFTEVDALEINKTWDIVDLPPGKVA 1032


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  193 bits (491), Expect(3) = 1e-87
 Identities = 97/223 (43%), Positives = 141/223 (63%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            G+ + QRK+  D++ E   +G +    P++   +L + +     NP  Y+RL+G+L +L 
Sbjct: 829  GLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNPESYRRLVGRLIYLA 888

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
                DL+++V  LSQ+M  P   H +AA   +RYL+  P  G+ + +D  L L G+ D+D
Sbjct: 889  VTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSD 948

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
             AAC   R+S+SG+ + LG SP+SWK+KKQ  +S SSAEAEYR+M  +  E+ W+  LL 
Sbjct: 949  WAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLL 1008

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             LGV     I L CD+Q+A+H+AK  VFHE TKHIE+DCHFVR
Sbjct: 1009 SLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFVR 1051



 Score =  144 bits (364), Expect(3) = 1e-87
 Identities = 73/156 (46%), Positives = 101/156 (64%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T SPV KM +++  ++I   +   L+Q+DV+ AFLHGDL EEV+M  PPG   S P+ V 
Sbjct: 670  TFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVC 729

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+++L  AL    F  S +DYSLF  +T  +   V VYVDD++++
Sbjct: 730  RLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIIS 789

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+ A +   K +L+  FK++DLGV  YFLG+E  R
Sbjct: 790  GNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVAR 825



 Score = 35.0 bits (79), Expect(3) = 1e-87
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 1236 GWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            GW+ +M  EI A + N TW + PLP  K+A
Sbjct: 601  GWQKSMHEEIRALEENGTWXLEPLPKGKRA 630


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  193 bits (491), Expect(3) = 2e-87
 Identities = 97/223 (43%), Positives = 141/223 (63%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            G+ + QRK+  D++ E   +G +    P++   +L + +     NP  Y+RL+G+L +L 
Sbjct: 908  GLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLXLANGELLSNPESYRRLVGRLIYLA 967

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
                DL+++V  LSQ+M  P   H +AA   +RYL+  P  G+ + +D  L L G+ D+D
Sbjct: 968  VTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSD 1027

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
             AAC   R+S+SG+ + LG SP+SWK+KKQ  +S SSAEAEYR+M  +  E+ W+  LL 
Sbjct: 1028 WAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLL 1087

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             LGV     I L CD+Q+A+H+AK  VFHE TKHIE+DCHFVR
Sbjct: 1088 SLGVHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFVR 1130



 Score =  144 bits (362), Expect(3) = 2e-87
 Identities = 73/156 (46%), Positives = 100/156 (64%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T SPV KM  ++  ++I   +   L+Q+DV+ AFLHGDL EEV+M  PPG   S P+ V 
Sbjct: 749  TFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVC 808

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+++L  AL    F  S +DYSLF  +T  +   V VYVDD++++
Sbjct: 809  RLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIIS 868

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+ A +   K +L+  FK++DLGV  YFLG+E  R
Sbjct: 869  GNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVAR 904



 Score = 35.0 bits (79), Expect(3) = 2e-87
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 1236 GWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            GW+ +M  EI A + N TW + PLP  K+A
Sbjct: 680  GWQKSMHEEIRALEENGTWTLEPLPKGKRA 709


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  187 bits (476), Expect(3) = 1e-86
 Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 1/225 (0%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPH-PNPTIYKRLLGQLNF 498
            +G++++QRK+A D++ +    G +    P++ + KLT +   P   +P  YKRL+G+L +
Sbjct: 854  KGIVLSQRKYALDVLKDSGFFGSKPIGFPMESSLKLTANDSSPLLSDPASYKRLIGKLLY 913

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            LT   LDL++ VQ L+Q+M +P + HLQAA   LRY+++    GLF+ +   L L  + D
Sbjct: 914  LTITRLDLAYXVQALNQFMSNPHSTHLQAAERVLRYIKATLGQGLFLKASSDLHLKAYSD 973

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            +D   C + R+S++GF + +G S +SWKSKKQP IS SSA+AEYR++     E+ W+V L
Sbjct: 974  SDWGGCINTRRSVTGFTVFIGDSLISWKSKKQPTISRSSAKAEYRALATTTCELQWLVYL 1033

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            L DL V    P  L+ D++ A  IA   V HE TKHI+LDCH VR
Sbjct: 1034 LVDLNVKHPQPALLYTDSKPASKIASNPVHHERTKHIQLDCHLVR 1078



 Score =  147 bits (370), Expect(3) = 1e-86
 Identities = 75/159 (47%), Positives = 103/159 (64%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T SPV KM  ++ L++I   +Q  L+QLDVN AFLHGDL+EEV+M  P G S  +   V 
Sbjct: 696  TYSPVAKMTTVRVLLAIAAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGFSTPNDPRVC 755

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            +L+KSLYGL+  SRQWY++LS++L    FS +  D SLF K T T    + +YVDD+++ 
Sbjct: 756  KLKKSLYGLRQASRQWYSKLSSSLLKFGFSQAKTDSSLFIKQTSTSFIALLIYVDDVIIA 815

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCRCLK 671
             N+  EI  +K FL+  F I+DLG   YF+G+E  R  K
Sbjct: 816  SNDLKEIDVVKKFLHESFTIKDLGELKYFVGIEVARSAK 854



 Score = 35.4 bits (80), Expect(3) = 1e-86
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 1233 WRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            W+  M  EI+A K N TW++  LPP K A
Sbjct: 628  WQTAMTDEIKALKHNKTWDLAILPPNKTA 656


>ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Solanum tuberosum]
          Length = 1471

 Score =  236 bits (601), Expect(2) = 2e-85
 Identities = 113/223 (50%), Positives = 162/223 (72%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            GV+++QRKF  DL+ E+  +   S + PLDP  KL         +PT Y++L+G+LNFL 
Sbjct: 1188 GVIMSQRKFVLDLLKEYGCLRYSSFSSPLDPNVKLKAKEGTVLFDPTFYRKLVGKLNFLV 1247

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
            +  LD+++ VQ LSQ+MQ P   HLQAAYH LRYL+++P LG+F++S P+  +  + D+D
Sbjct: 1248 NTRLDIAYGVQHLSQFMQDPREPHLQAAYHLLRYLKNDPTLGIFMSSAPNYSVHAYCDSD 1307

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
              +C D ++S+SG+ + LG +P+SWKSKKQ  ISLSSAEA YRS++++V E+ W+  LL 
Sbjct: 1308 WESCPDFKRSVSGYIVLLGKTPISWKSKKQETISLSSAEAAYRSLKKVVGELVWVDRLLR 1367

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            +L V  S P++++CDNQ+AIHIA+ LVFHE TK IE+DCHFVR
Sbjct: 1368 ELDVPSSKPVAVYCDNQSAIHIARNLVFHERTKQIEVDCHFVR 1410



 Score =  108 bits (270), Expect(2) = 2e-85
 Identities = 55/117 (47%), Positives = 77/117 (65%)
 Frame = -1

Query: 1039 GDLSEEVFMHFPPGLSPSHPSHVYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDY 860
            GD S + +   PPGL  +  + V +L KSLYGLK  SRQWY +LS AL ++ ++ S++DY
Sbjct: 1065 GDFSLKQWASLPPGLEVTGSTAVCKLNKSLYGLKQASRQWYEKLSEALFSKGYTHSMSDY 1124

Query: 859  SLFFKSTRTLVSIVTVYVDDILLTENNQAEITDLKVFLNFEFKIEDLGVANYFLGME 689
            SLF K++      V VYVDD+++   N +EI  LK FL+  FKI+DLG  +YFL +E
Sbjct: 1125 SLFLKNSNHSSIFVAVYVDDVIIIGTNPSEIIQLKQFLHDTFKIKDLGKLHYFLCLE 1181


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  187 bits (475), Expect(3) = 5e-85
 Identities = 94/223 (42%), Positives = 140/223 (62%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            G+ + QRK+  D++ E   +G +    P++   +L + +     N   Y+RL+G+L +L 
Sbjct: 1191 GLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHRLGLANGELLSNLESYRRLVGRLIYLA 1250

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
                DL+++V  LSQ+MQ P   H +AA   + YL+  P  G+ + +D  L L G+ D+D
Sbjct: 1251 VTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSD 1310

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
             AAC   ++S+SG+ + LG SP+SWK+KKQ  +S SSAEAEYR+M  +  E+ W+  LL 
Sbjct: 1311 WAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLL 1370

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             LG+     I L CD+Q+A+H+AK  VFHE TKHIE+DCHFVR
Sbjct: 1371 SLGMHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFVR 1413



 Score =  142 bits (358), Expect(3) = 5e-85
 Identities = 73/156 (46%), Positives = 99/156 (63%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T SPV KM  ++  ++I   +   L+Q+DV+ AFLHGDL EEV+M  PPG   S P+ V 
Sbjct: 1032 TFSPVAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVC 1091

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+A+L  AL    F  S +DYSLF  +   +   V VYVDD++++
Sbjct: 1092 RLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIIS 1151

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+ A +   K +L+  FK++DLGV  YFLG+E  R
Sbjct: 1152 GNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVAR 1187



 Score = 35.0 bits (79), Expect(3) = 5e-85
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 1236 GWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            GW+ +M  EI A + N TW + PLP  K+A
Sbjct: 963  GWQKSMHEEIRALEENGTWTLEPLPKGKRA 992


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  208 bits (529), Expect(2) = 7e-85
 Identities = 105/225 (46%), Positives = 146/225 (64%)
 Frame = -3

Query: 677  PEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNF 498
            P+G  ++QRK+A D++ E   +G + S +P+    KL   +     NP  Y+RL+G+  +
Sbjct: 1224 PDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIY 1283

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            LT    DLS+ V  LSQ+MQ+P   H +AA   +RYL+ +P  G+F+ SD SL +  + D
Sbjct: 1284 LTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCD 1343

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            +D  AC   R+S+S + + LG SP+SWK+KKQ  +S SSAEAEYR+M   + E+ W+  L
Sbjct: 1344 SDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKAL 1403

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            L DLGV  S P+ LHCD++AAIHIA   VFHE TKHIE DCH VR
Sbjct: 1404 LKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVR 1448



 Score =  134 bits (338), Expect(2) = 7e-85
 Identities = 69/156 (44%), Positives = 95/156 (60%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV K+  ++ ++++   +   ++Q+DV+ AFLHGDL EEV+M  PPG   S PS V 
Sbjct: 1067 TFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVC 1126

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+++LS AL    F+ S  DYSLF       +  V VYVDD+++ 
Sbjct: 1127 RLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVA 1186

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             NN   I   K  L+  F ++DLG   YFLG+E  R
Sbjct: 1187 GNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSR 1222


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
            At2g23330 [Arabidopsis thaliana]
            gi|110742535|dbj|BAE99183.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  208 bits (529), Expect(2) = 7e-85
 Identities = 105/225 (46%), Positives = 146/225 (64%)
 Frame = -3

Query: 677  PEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNF 498
            P+G  ++QRK+A D++ E   +G + S +P+    KL   +     NP  Y+RL+G+  +
Sbjct: 504  PDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIY 563

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            LT    DLS+ V  LSQ+MQ+P   H +AA   +RYL+ +P  G+F+ SD SL +  + D
Sbjct: 564  LTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCD 623

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            +D  AC   R+S+S + + LG SP+SWK+KKQ  +S SSAEAEYR+M   + E+ W+  L
Sbjct: 624  SDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKAL 683

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            L DLGV  S P+ LHCD++AAIHIA   VFHE TKHIE DCH VR
Sbjct: 684  LKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVR 728



 Score =  134 bits (338), Expect(2) = 7e-85
 Identities = 69/156 (44%), Positives = 95/156 (60%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV K+  ++ ++++   +   ++Q+DV+ AFLHGDL EEV+M  PPG   S PS V 
Sbjct: 347  TFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVC 406

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRKSLYGLK   R W+++LS AL    F+ S  DYSLF       +  V VYVDD+++ 
Sbjct: 407  RLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVA 466

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             NN   I   K  L+  F ++DLG   YFLG+E  R
Sbjct: 467  GNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSR 502


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  192 bits (489), Expect(3) = 5e-84
 Identities = 95/224 (42%), Positives = 150/224 (66%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            +G  ++QRK+  D+I E   +G R S  PL+   KL++ +     + + Y+RL+G+L +L
Sbjct: 1197 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 1256

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
                 +LS++V TL+Q+MQ+P   H  AA   +RYL+SNP  G+ ++S  +LQ+ G+ D+
Sbjct: 1257 VVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 1316

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D AAC   R+S++G+++ LG +P+SWK+KKQP +S SSAEAEYR+M  L  E+ W+  +L
Sbjct: 1317 DYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVL 1376

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             DLGVS    + +  D+++AI ++   V HE TKH+E+DCHF+R
Sbjct: 1377 YDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIR 1420



 Score =  130 bits (328), Expect(3) = 5e-84
 Identities = 66/156 (42%), Positives = 96/156 (61%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV KM+ ++  + +   R   ++Q+DV+ AFLHGDL EEV+M  P G     PS V 
Sbjct: 1039 TFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVC 1098

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RL KSLYGLK   R W+++LS+AL    F+ SL+DYSLF  +   +   V VYVDD++++
Sbjct: 1099 RLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIIS 1158

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             +    +   K +L   F ++DLG+  YFLG+E  R
Sbjct: 1159 GSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 1194



 Score = 37.7 bits (86), Expect(3) = 5e-84
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 1254 QAAVHEGWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            +A V + WR  M  EIE+ + N T+ ++ LPP K+A
Sbjct: 964  EAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRA 999


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  193 bits (490), Expect(3) = 5e-84
 Identities = 96/224 (42%), Positives = 150/224 (66%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            +G  ++QRK+  D+I E   +G R S  PL+   KL++ +     + + Y+RL+G+L +L
Sbjct: 838  QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 897

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
                 +LS++V TL+Q+MQ+P   H  AA   +RYL+SNP  G+ ++S  +LQ+ G+ D+
Sbjct: 898  AVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 957

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D AAC   R+S++G+++ LG +P+SWK+KKQP IS SSAEAEYR+M  L  E+ W+  +L
Sbjct: 958  DYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVL 1017

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             DLGVS    + +  D+++AI ++   V HE TKH+E+DCHF+R
Sbjct: 1018 YDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIR 1061



 Score =  130 bits (327), Expect(3) = 5e-84
 Identities = 66/156 (42%), Positives = 96/156 (61%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV KM+ ++  + +   R   ++Q+DV+ AFLHGDL EEV+M  P G     PS V 
Sbjct: 680  TFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVC 739

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RL KSLYGLK   R W+++LS+AL    F+ SL+DYSLF  +   +   V VYVDD++++
Sbjct: 740  RLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIIS 799

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             +    +   K +L   F ++DLG+  YFLG+E  R
Sbjct: 800  GSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 835



 Score = 37.7 bits (86), Expect(3) = 5e-84
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 1254 QAAVHEGWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            +A V + WR  M  EIE+ + N T+ ++ LPP K+A
Sbjct: 605  EAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRA 640


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  202 bits (515), Expect(2) = 6e-84
 Identities = 103/224 (45%), Positives = 146/224 (65%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            +G+ ++QRK+A ++I E   +G R    P++   KL + +     +P +Y+RL+G+L +L
Sbjct: 1045 DGLFLSQRKYALNIIKECGLLGARPVEFPMEENHKLALANGRLLNDPGMYRRLVGRLIYL 1104

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
            T    DL++ V  LSQ+MQSP   HL AAY  +RYL+  P  G+ + +D  LQL  + D+
Sbjct: 1105 TVTRPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDS 1164

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D  +C   R+SISG  + LG SP+SW+ KKQ  IS SSAE EY SM    +E++W+  LL
Sbjct: 1165 DWXSCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTWLKSLL 1224

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            + LGV    P+ L+CDN+AA+HIA   VFHE TKHIE+DCHFVR
Sbjct: 1225 ASLGVLHDKPMKLYCDNKAALHIAANPVFHERTKHIEIDCHFVR 1268



 Score =  137 bits (344), Expect(2) = 6e-84
 Identities = 70/154 (45%), Positives = 97/154 (62%)
 Frame = -1

Query: 1141 SPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVYRL 962
            SPV KM  ++C +++ V ++  L+Q+DVN AFLHGDL EEV+M  P G   +  + V +L
Sbjct: 889  SPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKL 948

Query: 961  RKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLTEN 782
            +KSLYGLK  SRQW+A+L+ AL    F  SL DYSLF      +V  + VYVDD++L  N
Sbjct: 949  QKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDLILAGN 1008

Query: 781  NQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
            +       K FL+ +F I++LG   Y LG+E  R
Sbjct: 1009 DNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVAR 1042


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  192 bits (489), Expect(3) = 7e-84
 Identities = 95/224 (42%), Positives = 150/224 (66%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            +G  ++QRK+  D+I E   +G R S  PL+   KL++ +     + + Y+RL+G+L +L
Sbjct: 838  QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 897

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
                 +LS++V TL+Q+MQ+P   H  AA   +RYL+SNP  G+ ++S  +LQ+ G+ D+
Sbjct: 898  AVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 957

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D AAC   R+S++G+++ LG +P+SWK+KKQP +S SSAEAEYR+M  L  E+ W+  +L
Sbjct: 958  DYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVL 1017

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             DLGVS    + +  D+++AI ++   V HE TKH+E+DCHF+R
Sbjct: 1018 YDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIR 1061



 Score =  130 bits (327), Expect(3) = 7e-84
 Identities = 66/156 (42%), Positives = 96/156 (61%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV KM+ ++  + +   R   ++Q+DV+ AFLHGDL EEV+M  P G     PS V 
Sbjct: 680  TFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVC 739

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RL KSLYGLK   R W+++LS+AL    F+ SL+DYSLF  +   +   V VYVDD++++
Sbjct: 740  RLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIIS 799

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             +    +   K +L   F ++DLG+  YFLG+E  R
Sbjct: 800  GSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSR 835



 Score = 37.7 bits (86), Expect(3) = 7e-84
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 1254 QAAVHEGWRATMDTEIEAFKSNSTWEVIPLPPEKQA 1147
            +A V + WR  M  EIE+ + N T+ ++ LPP K+A
Sbjct: 605  EAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRA 640


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  206 bits (525), Expect(2) = 1e-83
 Identities = 102/224 (45%), Positives = 148/224 (66%)
 Frame = -3

Query: 674  EGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFL 495
            EG+ + QRK+A++L+ +    G + S++P+DP   LT +     PN T Y+ L+G+L +L
Sbjct: 768  EGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYL 827

Query: 494  THFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDA 315
                 D++F V TLSQ++ +P+  H+QAA+  LRYL+ NP  GL  ++   L L GF DA
Sbjct: 828  CITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDA 887

Query: 314  D*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLL 135
            D   C D+R+S++GF + LG S ++WKSKKQ  +S SS E+EYRS+ +   EI W+  LL
Sbjct: 888  DWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLL 947

Query: 134  SDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             DL V+ + P  L CDN++A+H+A   VFHE TKHIE+DCH VR
Sbjct: 948  KDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVR 991



 Score =  132 bits (331), Expect(2) = 1e-83
 Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSP----SHP 980
            T SPV K   ++ L+ +       L Q+DV+ AFLHG+L EE++M  P G +P    S P
Sbjct: 605  TFSPVAKFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLP 664

Query: 979  SH-VYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVD 803
            S  V RL KSLYGLK  SRQWY RLS+     +F  S  D ++F K + T + +V VYVD
Sbjct: 665  SKPVCRLLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVD 724

Query: 802  DILLTENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
            D+++  N+ + + +LK  L  EFKI+DLG A +FLG+E  R
Sbjct: 725  DLMIASNDSSAVENLKELLRSEFKIKDLGPARFFLGLEIAR 765


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  190 bits (483), Expect(3) = 4e-83
 Identities = 96/223 (43%), Positives = 146/223 (65%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            G+ I QRK+A D+I E   +G++ +  PL+   KL + +     +P  Y+RL+G+L +L 
Sbjct: 1063 GIYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLA 1122

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
               LDL+F+V  L+++MQ P   H  AA   +RYL+++P  G+F+      Q+ G+ D+D
Sbjct: 1123 VTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSD 1182

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
             A    +R+S++G+++  G SP+SWK+KKQ  +S SSAEAEYR+M  L +E+ W+  LL 
Sbjct: 1183 WAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLF 1242

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             LGVS   P+ + CD+++AI+IA   VFHE TKHIE+D HFVR
Sbjct: 1243 SLGVSHVQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVR 1285



 Score =  142 bits (359), Expect(3) = 4e-83
 Identities = 71/156 (45%), Positives = 98/156 (62%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSHVY 968
            T +PV KMA ++  + + VKR   ++Q+DV+ AFLHGDL EEV+M  PPG   SHP+ V 
Sbjct: 904  TFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVC 963

Query: 967  RLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILLT 788
            RLRK+LYGLK   R W+ +L+ AL    F  SL DYSLF     ++   + +YVDD+++T
Sbjct: 964  RLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDDLIIT 1023

Query: 787  ENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
             N+Q      K +L   F ++DLG   YFLG+E  R
Sbjct: 1024 GNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVAR 1059



 Score = 25.0 bits (53), Expect(3) = 4e-83
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 1209 IEAFKSNSTWEVIPLPPEKQA 1147
            I+A + N TW +  LPP K+A
Sbjct: 844  IDAQEENHTWTIEDLPPGKRA 864


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  197 bits (501), Expect(2) = 5e-83
 Identities = 99/225 (44%), Positives = 147/225 (65%)
 Frame = -3

Query: 677  PEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNF 498
            P+G+ ++QRK+A D+I +   +G R +  PL+    L  D      +P  ++RL+G+L +
Sbjct: 1219 PDGIFLSQRKYALDIISDSGTLGARPAYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLY 1278

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            L H   +LS++V  LSQ+MQ+P   HL+AA   +RYL+ +P  G+ ++S+  L L  + D
Sbjct: 1279 LLHTRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCD 1338

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            +D  +C   R+S+S + + LGGSP+SWK+KKQ  +S SSAEAEYR+M   + EI W+  L
Sbjct: 1339 SDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKL 1398

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            L +LG++ + P  L CD++AAI IA   VFHE TKHIE DCH VR
Sbjct: 1399 LKELGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSVR 1443



 Score =  139 bits (350), Expect(2) = 5e-83
 Identities = 72/158 (45%), Positives = 95/158 (60%)
 Frame = -1

Query: 1153 TGTISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPSH 974
            T T +PVVKM  ++ L+ +    Q  +YQ+DV+ AFLHGDL EEV+M  PPG   SHP  
Sbjct: 1060 TETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDK 1119

Query: 973  VYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDIL 794
            V RLRKSLYGLK   R W+ +LS AL    F     DYS F  S + +   V VYVDD++
Sbjct: 1120 VCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLI 1179

Query: 793  LTENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
            +  N++  +   K +L   F ++DLG   YFLG+E  R
Sbjct: 1180 ICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSR 1217


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  192 bits (489), Expect(2) = 1e-82
 Identities = 96/223 (43%), Positives = 140/223 (62%)
 Frame = -3

Query: 671  GVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNFLT 492
            G+ ++QRK+  DL+ +   +G ++++ P++   KL++D  V  P+ ++Y+RL        
Sbjct: 1039 GICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYRRL-------- 1090

Query: 491  HFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYDAD 312
                         SQ++  P   HL AA   LRYL+ NP +GLF  S+  L+L+ + D+D
Sbjct: 1091 -------------SQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELRLMAYTDSD 1137

Query: 311  *AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCLLS 132
             A C D+R+S++GF + LG S VSWKSKKQ  +S SSAEAEYR+M     EI+W++ LL 
Sbjct: 1138 WARCPDSRRSVTGFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITWLLALLK 1197

Query: 131  DLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            D G+  S P  L CDNQ+A+H+A+  VFHE TKHIE+DCH VR
Sbjct: 1198 DFGIDHSAPALLFCDNQSALHMAENPVFHERTKHIEIDCHLVR 1240



 Score =  142 bits (359), Expect(2) = 1e-82
 Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLS---PSHPS 977
            T SPV K+  ++ L++I   +   L QLDVN AFLHGDL+EEV+M  PPG +    S PS
Sbjct: 876  TFSPVAKLVTVKLLLAIAAVKGWHLSQLDVNNAFLHGDLNEEVYMKLPPGYNRKGESLPS 935

Query: 976  H-VYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDD 800
            + V  L KSLYGLK  SRQW+++ S A+    FS S +D+SLF K+   L   + VYVDD
Sbjct: 936  NXVCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIAJLVYVDD 995

Query: 799  ILLTENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
            +++  NNQ  I DLK  LN  FK++DLG   YFLG+E  +
Sbjct: 996  VIIASNNQGAIADLKSELNKLFKLKDLGDVKYFLGLEIAK 1035


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  196 bits (498), Expect(3) = 1e-82
 Identities = 103/227 (45%), Positives = 138/227 (60%)
 Frame = -3

Query: 683  QMPEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQL 504
            Q   G++I+QRK+A D++ E   +G R    P+DP  KL      P  NP  Y+RL+G+L
Sbjct: 1112 QSRSGIVISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGKL 1171

Query: 503  NFLTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGF 324
            N+LT    D+SF V  +SQ+M SP   H +A    LRY++S P  GL         ++G+
Sbjct: 1172 NYLTVTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGY 1231

Query: 323  YDAD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIV 144
             DAD A     R+S SG+ + +GG+ VSWKSKKQ  ++ SSAE+EYR+M     E+ WI 
Sbjct: 1232 TDADWAGSPSDRRSTSGYCVLVGGNLVSWKSKKQNVVARSSAESEYRAMATATCELVWIK 1291

Query: 143  CLLSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
             LL +L       + L CDNQAA+HIA   VFHE TKHIE+DCHFVR
Sbjct: 1292 QLLGELKFGKVDKMELVCDNQAALHIASNPVFHERTKHIEIDCHFVR 1338



 Score =  125 bits (313), Expect(3) = 1e-82
 Identities = 70/163 (42%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
 Frame = -1

Query: 1168 FATRKTGTISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGL-- 995
            F    + T +PV K+A ++  +S+   R  PL+QLD+  AFLHGDL EEV+M  PPG   
Sbjct: 947  FGLDYSDTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYMEQPPGFVA 1006

Query: 994  SPSHPSHVYRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFK-STRTLVSIV 818
                 S V RLR+SLYGLK + R W+ + S  +     + S  D+S+F++ S  +    +
Sbjct: 1007 QGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSRCIYL 1066

Query: 817  TVYVDDILLTENNQAEITDLKVFLNFEFKIEDLGVANYFLGME 689
             VYVDDI++T N+Q  ITDLK  L   F+ +DLG   YFLG+E
Sbjct: 1067 VVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIE 1109



 Score = 35.4 bits (80), Expect(3) = 1e-82
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 1254 QAAVHEGWRATMDTEIEAFKSNSTWEVIPLPPEK 1153
            +A  H GWR  M  E+ A   + TWE++ LP  K
Sbjct: 891  EALSHSGWRQAMVDEMSALHKSGTWELVSLPAVK 924


>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
          Length = 1262

 Score =  191 bits (486), Expect(3) = 3e-82
 Identities = 96/225 (42%), Positives = 149/225 (66%)
 Frame = -3

Query: 677  PEGVLITQRKFARDLIVEHPDIGLRSSTMPLDPTFKLTIDSDVPHPNPTIYKRLLGQLNF 498
            P G++++QRK+A DL+ +   +G R ++ P+D   KL  +S  P  N   Y+RL+G+L +
Sbjct: 991  PRGIVLSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNP-VNKERYQRLVGRLIY 1049

Query: 497  LTHFHLDLSFTVQTLSQYMQSPSTGHLQAAYHTLRYLRSNPELGLFINSDPSLQLLGFYD 318
            L H   D+++ V  +S+YM  P +GH+ A Y  LRYL+ +P  GL+   +  L++ G+ D
Sbjct: 1050 LCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLEVEGYCD 1109

Query: 317  AD*AACSDARKSISGFYLNLGGSPVSWKSKKQPAISLSSAEAEYRSMRRLVAEISWIVCL 138
            AD A+C D R+S SG+ + +GG+ VSW+SKKQP +S S+AEAEYR+M   ++E+ W+  L
Sbjct: 1110 ADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVSLSELLWLRNL 1169

Query: 137  LSDLGVSPSLPISLHCDNQAAIHIAKKLVFHE*TKHIELDCHFVR 3
            LS+L +    P+ L CDN++AI IA   V H+ TKH+ELD  F++
Sbjct: 1170 LSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIK 1214



 Score =  135 bits (340), Expect(3) = 3e-82
 Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
 Frame = -1

Query: 1147 TISPVVKMAIIQCLVSITVKRQ*PLYQLDVNKAFLHGDLSEEVFMHFPPGLSPSHPS-HV 971
            T +PV KM+ ++ ++S  V    PL+QLDV  AFLHGDL EEV+M  PPG +       V
Sbjct: 833  TFAPVAKMSTVRTIISCAVNFDWPLHQLDVKNAFLHGDLQEEVYMEIPPGFATLQTKGKV 892

Query: 970  YRLRKSLYGLKHTSRQWYARLSAALGTRDFSSSLNDYSLFFKSTRTLVSIVTVYVDDILL 791
             RL+KSLYGLK + R W+ R   A+    +     D+++F+  +   ++I+ VYVDD+++
Sbjct: 893  LRLKKSLYGLKQSPRAWFDRFRRAMCAMGYKQCNGDHTVFYHHSGDHITILAVYVDDMII 952

Query: 790  TENNQAEITDLKVFLNFEFKIEDLGVANYFLGMECCR 680
            T N+ +EIT LK  L+ EF+++DLG   YFLG+E  R
Sbjct: 953  TGNDCSEITRLKQNLSKEFEVKDLGQLKYFLGIEIAR 989



 Score = 28.5 bits (62), Expect(3) = 3e-82
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 1233 WRATMDTEIEAFKSNSTWEVIPLPPEKQ 1150
            W   M  E+EA + N TW+++  P  K+
Sbjct: 765  WHQAMLDELEALEKNKTWDLVSYPNGKK 792