BLASTX nr result

ID: Atropa21_contig00034278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00034278
         (537 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245274.1| PREDICTED: uncharacterized protein LOC101263...    50   6e-08
ref|XP_004243317.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    54   1e-07

>ref|XP_004245274.1| PREDICTED: uncharacterized protein LOC101263338 [Solanum
           lycopersicum]
          Length = 218

 Score = 50.4 bits (119), Expect(2) = 6e-08
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = -3

Query: 532 IIFPDQLTEMLLPTNNDLKYLELRIDSSTATSQQILDGFVWILPGLKTLSLTLDSISELI 353
           ++ P ++T+ +LP N D+  LEL I S   T + ++D F WILP LKTLSLTL S ++  
Sbjct: 119 VLIPVEVTD-ILPVN-DITNLELEIISRHGTFEGVIDDFTWILPDLKTLSLTLGSTTKFF 176

Query: 352 E 350
           +
Sbjct: 177 Q 177



 Score = 32.0 bits (71), Expect(2) = 6e-08
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -1

Query: 351 REDDVKVLSAELVHNPKSDQGVCFLRINNFLNSILLEV 238
           RE+D + LSAE VH PK D+ V  LR N  L+ I  E+
Sbjct: 180 REEDGE-LSAEEVHKPKPDKSVSILRNNKLLHIIGNEI 216


>ref|XP_004243317.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum
           lycopersicum]
          Length = 565

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 28/61 (45%), Positives = 42/61 (68%)
 Frame = -3

Query: 532 IIFPDQLTEMLLPTNNDLKYLELRIDSSTATSQQILDGFVWILPGLKTLSLTLDSISELI 353
           ++ P ++T+ +LP N D+K LEL I S   T ++++D F WILP LKTLSLTL S ++  
Sbjct: 466 VLIPVEVTD-ILPVN-DIKNLELEIISRHGTFEEVVDDFTWILPDLKTLSLTLGSTTKFF 523

Query: 352 E 350
           +
Sbjct: 524 Q 524



 Score = 27.7 bits (60), Expect(2) = 1e-07
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -1

Query: 351 REDDVKVLSAELVHNPKSDQGVCFLRINNFLNSILLEV 238
           RE+D + LSAE VH PK D+ V  LR +   + I  E+
Sbjct: 527 REEDGE-LSAEEVHKPKPDKRVSILRNDKLFHIIGNEI 563


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