BLASTX nr result
ID: Atropa21_contig00034222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00034222
(583 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA81883.1| putative glycine-rich RNA binding protein-like [S... 94 3e-19
ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein ... 82 5e-16
ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein ... 82 5e-16
ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-... 82 7e-16
ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-... 82 7e-16
ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-... 82 7e-16
ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-... 82 7e-16
ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-... 82 7e-16
gb|ABB87126.1| putative glycine-rich RNA binding protein-like [S... 82 9e-16
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa] 82 3e-15
gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum] 81 7e-15
ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-... 82 2e-14
ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis... 79 3e-14
gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis t... 79 3e-14
ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis... 79 3e-14
dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana] 79 3e-14
dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana s... 79 4e-14
emb|CAA89058.1| putative glycine rich RNA binding protein [Solan... 80 5e-14
gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding prote... 80 6e-14
gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlise... 78 6e-14
>gb|ABA81883.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 176
Score = 93.6 bits (231), Expect(2) = 3e-19
Identities = 50/64 (78%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +1
Query: 160 FFCYNVVDLFISNVFAMYFF-ILQIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL 336
F CY VDLF S+V M F I QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL
Sbjct: 10 FGCY-FVDLFGSDVIVMVFISIFQIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL 68
Query: 337 DSSR 348
D +
Sbjct: 69 DGRK 72
Score = 27.7 bits (60), Expect(2) = 3e-19
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 73 ITVNEAQSRGGGGGG 87
>ref|XP_006365106.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X1
[Solanum tuberosum]
Length = 178
Score = 82.4 bits (202), Expect(2) = 5e-16
Identities = 41/55 (74%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S+ F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSDAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 5e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_006365107.1| PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2
[Solanum tuberosum]
Length = 176
Score = 82.4 bits (202), Expect(2) = 5e-16
Identities = 41/55 (74%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S+ F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSDAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 5e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_004230943.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 1 [Solanum
lycopersicum]
Length = 175
Score = 82.0 bits (201), Expect(2) = 7e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 7e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_004230944.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 2 [Solanum
lycopersicum]
Length = 163
Score = 82.0 bits (201), Expect(2) = 7e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 7e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_004230946.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 4 [Solanum
lycopersicum]
Length = 158
Score = 82.0 bits (201), Expect(2) = 7e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 7e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_004230947.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 5 [Solanum
lycopersicum]
Length = 157
Score = 82.0 bits (201), Expect(2) = 7e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 7e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>ref|XP_004230948.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 6 [Solanum
lycopersicum]
Length = 152
Score = 82.0 bits (201), Expect(2) = 7e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 7e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGYGGG 91
>gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 81.6 bits (200), Expect(2) = 9e-16
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 27.7 bits (60), Expect(2) = 9e-16
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGGGG 91
>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 82.0 bits (201), Expect(2) = 3e-15
Identities = 42/55 (76%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + + F+ Y IL +IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 25.4 bits (54), Expect(2) = 3e-15
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 77 ITVNEAQSRGSGGGG 91
>gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 80.9 bits (198), Expect(2) = 7e-15
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + + F+ Y I+ +IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 25.4 bits (54), Expect(2) = 7e-15
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 77 ITVNEAQSRGSGGGG 91
>ref|XP_004230945.1| PREDICTED: glycine-rich RNA-binding protein-like isoform 3 [Solanum
lycopersicum]
Length = 161
Score = 82.0 bits (201), Expect(2) = 2e-14
Identities = 41/55 (74%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD
Sbjct: 19 DQTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 73
Score = 23.1 bits (48), Expect(2) = 2e-14
Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
Frame = +2
Query: 341 VAVNETQSRGG---RGGG 385
+ VNE QSRGG GGG
Sbjct: 77 ITVNEAQSRGGGRREGGG 94
>ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|RBG7_ARATH RecName:
Full=Glycine-rich RNA-binding protein 7;
Short=AtGR-RBP7; AltName: Full=AtRBG7; AltName:
Full=Glycine-rich protein 7; Short=AtGRP7; AltName:
Full=Protein COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2;
Short=Protein CCR2 gi|16226372|gb|AAL16149.1|AF428381_1
At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein
[Arabidopsis thaliana] gi|166837|gb|AAA32853.1|
RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding
protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis
thaliana] gi|330252115|gb|AEC07209.1| glycine-rich
RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + FA Y ++ +IINDRETGRSRGFGFVTFKDE+AM+DAIEGMNGQDLD
Sbjct: 21 DRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLD 75
Score = 25.4 bits (54), Expect(2) = 3e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 79 ITVNEAQSRGSGGGG 93
>gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + FA Y ++ +IINDRETGRSRGFGFVTFKDE+AM+DAIEGMNGQDLD
Sbjct: 21 DRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLD 75
Score = 25.4 bits (54), Expect(2) = 3e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 79 ITVNEAQSRGSGGGG 93
>ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding
protein 7 [Arabidopsis thaliana]
Length = 159
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + FA Y ++ +IINDRETGRSRGFGFVTFKDE+AM+DAIEGMNGQDLD
Sbjct: 21 DRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLD 75
Score = 25.4 bits (54), Expect(2) = 3e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 79 ITVNEAQSRGSGGGG 93
>dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + FA Y ++ +IINDRETGRSRGFGFVTFKDE+AM+DAIEGMNGQDLD
Sbjct: 21 DRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLD 75
Score = 25.4 bits (54), Expect(2) = 3e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 79 ITVNEAQSRGSGGGG 93
>dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich
protein [Nicotiana tabacum]
Length = 156
Score = 78.6 bits (192), Expect(2) = 4e-14
Identities = 40/55 (72%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + F+ + IL +IINDRETGRSRGFGFVTFKDE+AMRDAIEGMNGQDLD
Sbjct: 19 DQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLD 73
Score = 25.4 bits (54), Expect(2) = 4e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 77 ITVNEAQSRGSGGGG 91
>emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 79.7 bits (195), Expect(2) = 5e-14
Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S+ F+ Y +++ IINDRETGRSRGFGFVTFKDEQAMRDAIEGMN QDLD
Sbjct: 19 DQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDLD 73
Score = 23.9 bits (50), Expect(2) = 5e-14
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 6/21 (28%)
Frame = +2
Query: 341 VAVNETQSR------GGRGGG 385
+ VNE QSR GGRGGG
Sbjct: 77 ITVNEAQSRGGVEAGGGRGGG 97
>gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 79.7 bits (195), Expect(2) = 6e-14
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFILQ--IINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D +S F+ Y IL+ IINDRETGRSRGFGFVTFKDEQ+MRDAIEGMNGQ LD
Sbjct: 21 DQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQTLD 75
Score = 23.5 bits (49), Expect(2) = 6e-14
Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
Frame = +2
Query: 341 VAVNETQSR--GGRGGG 385
+ VNE QSR GG GGG
Sbjct: 79 ITVNEAQSRGSGGNGGG 95
>gb|EPS70351.1| hypothetical protein M569_04412, partial [Genlisea aurea]
Length = 104
Score = 77.8 bits (190), Expect(2) = 6e-14
Identities = 38/55 (69%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 DLFISNVFAMYFFIL--QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLD 339
D + FA Y ++ +IINDRETGRSRGFGFVTFKDEQ+M+DAIEGMNGQ+LD
Sbjct: 21 DQSLEQAFAQYGQVIDSKIINDRETGRSRGFGFVTFKDEQSMKDAIEGMNGQELD 75
Score = 25.4 bits (54), Expect(2) = 6e-14
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 341 VAVNETQSRGGRGGG 385
+ VNE QSRG GGG
Sbjct: 79 ITVNEAQSRGSGGGG 93