BLASTX nr result
ID: Atropa21_contig00034058
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00034058
(926 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 91 6e-16
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 89 2e-15
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 89 2e-15
gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao] 86 2e-14
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 85 3e-14
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 85 4e-14
gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum] 85 4e-14
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 84 8e-14
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 84 8e-14
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom... 84 8e-14
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao] 84 8e-14
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom... 84 8e-14
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom... 84 8e-14
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 84 8e-14
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 84 8e-14
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao] 83 1e-13
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum] 83 1e-13
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom... 83 2e-13
gb|EOY26288.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 82 2e-13
gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobrom... 82 2e-13
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 90.9 bits (224), Expect = 6e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS+FWR Q ELGTRV+LSTAFHPQ D Q + I L + F
Sbjct: 1332 FTSNFWRTFQDELGTRVDLSTAFHPQTDGQSERTIQVLEDMLRACVMDFGGQWDQFLPLA 1391
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNNSY+S+I+MAPF+ +YGRR RS VGW E
Sbjct: 1392 EFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFE 1424
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 89.0 bits (219), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FWR Q+ELGTRV LST+FHPQ D Q + I L + F
Sbjct: 1488 FTSSFWRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQFLPLA 1547
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNNSY+S+I+MAPF+ +YGRR RS VGW E
Sbjct: 1548 EFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFE 1580
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 89.0 bits (219), Expect = 2e-15
Identities = 46/93 (49%), Positives = 56/93 (60%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FWR Q +LGTRV+LST FHPQ D Q + I L + + F
Sbjct: 1185 FTSSFWRTFQDDLGTRVDLSTTFHPQTDGQSERTIQVLEDMLQACVMDFGGQWDQFLPLA 1244
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNN+YYS+I+MAPF+ +YGRR RS VGW E
Sbjct: 1245 EFAYNNNYYSSIQMAPFEALYGRRCRSPVGWFE 1277
>gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]
Length = 421
Score = 85.9 bits (211), Expect = 2e-14
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Frame = +1
Query: 1 LSREGNFISVQNLK*V-----FYGDYLISVISKKKSCLMDHNCM*FTSHFWRYIQKELGT 165
L++ +F+SV+ Y D ++ + S + D FTS FW +Q+ LGT
Sbjct: 84 LTKSAHFLSVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQ-FTSRFWGKLQEALGT 142
Query: 166 RVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWRSFFYNNSYYSNIEMA 345
+++ STAFHPQ D Q + I L + L V + F YNNS+ ++I+MA
Sbjct: 143 KLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMA 202
Query: 346 PFKVMYGRRPRSLVGWLEV 402
PFK +YGRR RS +GWLEV
Sbjct: 203 PFKALYGRRCRSPIGWLEV 221
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 85.1 bits (209), Expect = 3e-14
Identities = 48/100 (48%), Positives = 59/100 (59%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTSHFW+ Q+ LGTRV+L+TAFHPQ D Q + I L L L +
Sbjct: 1663 FTSHFWKSFQRGLGTRVKLTTAFHPQTDGQAERTIQTLEDMLRACVLELKGSWEDHLPLI 1722
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEVVFIVFL 420
F YNNSY+S+I MAPF+ +YGRR RS VG EV + L
Sbjct: 1723 EFSYNNSYHSSIGMAPFEALYGRRCRSSVGLFEVGEVALL 1762
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 84.7 bits (208), Expect = 4e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 1168 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLV 1227
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 1228 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 1261
>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 367
Score = 84.7 bits (208), Expect = 4e-14
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLR--ICCEPA*LTLLVIGINFYS 294
FTS FW+ + ELGTR++LSTAFHPQ D Q + I L IC ++ G ++ S
Sbjct: 68 FTSKFWKILHAELGTRLDLSTAFHPQTDGQSERTIQVLEDMICA-----CVIEFGGHWDS 122
Query: 295 W---RSFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
+ F YNNSY+S+I+MAPF+ +YGRR RS +GW +
Sbjct: 123 FLPLAEFSYNNSYHSSIDMAPFEALYGRRCRSPIGWFD 160
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 84.0 bits (206), Expect = 8e-14
Identities = 45/93 (48%), Positives = 53/93 (56%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FWR Q ELGTRV+L T FHPQ D Q + I L +
Sbjct: 544 FTSSFWRTFQDELGTRVDLCTTFHPQTDGQSERTIKVLEDMLRACVMDFGGQWDQHLPLA 603
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNNSY+S+I+MAPF+ +YGRR RS VGW E
Sbjct: 604 EFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFE 636
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 400 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 459
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 460 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 493
>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 448
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 169 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 228
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 229 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 262
>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
Length = 415
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 136 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLV 195
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 196 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 229
>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 562
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 349 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 408
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 409 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 442
>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1502
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 1270 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 1329
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 1330 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 1363
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 242 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 301
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 302 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 335
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 84.0 bits (206), Expect = 8e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 630 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSEWTIQTLEDMLRACVIDLGVRWEQYLPLV 689
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 690 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 723
>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1480
Score = 83.2 bits (204), Expect = 1e-13
Identities = 43/94 (45%), Positives = 57/94 (60%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+ + STAFHPQ D Q + I L + L V +
Sbjct: 1239 FTSRFWGKLQEALGTKFDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 1298
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 1299 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 1332
>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
Length = 545
Score = 83.2 bits (204), Expect = 1e-13
Identities = 46/93 (49%), Positives = 54/93 (58%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS F R Q+ELGTRV LSTAFHPQ D Q + I L + F
Sbjct: 94 FTSSFLRAFQEELGTRVHLSTAFHPQTDGQSERTIQVLEDMLRACVMDFGGQWDQFLPLA 153
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNNSY+S+I+MAPF+ +YGRR S VGW E
Sbjct: 154 EFAYNNSYHSSIQMAPFEALYGRRCHSPVGWFE 186
>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 666
Score = 82.8 bits (203), Expect = 2e-13
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Frame = +1
Query: 1 LSREGNFISVQNLK*V-----FYGDYLISVISKKKSCLMDHNCM*FTSHFWRYIQKELGT 165
L++ +F+SV+ Y D ++ + S + D FTS FW +Q+ LGT
Sbjct: 450 LTKSAHFLSVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQ-FTSRFWGKLQEALGT 508
Query: 166 RVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWRSFFYNNSYYSNIEMA 345
+++ ST FHPQ D Q + I L + L V + F YNNS+ ++I+MA
Sbjct: 509 KLDFSTTFHPQTDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLVEFAYNNSFQTSIQMA 568
Query: 346 PFKVMYGRRPRSLVGWLEV 402
PF+ +YGRR RS +GWLEV
Sbjct: 569 PFEALYGRRCRSPIGWLEV 587
>gb|EOY26288.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 308
Score = 82.4 bits (202), Expect = 2e-13
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ ST FHPQ D Q + I L + L V +
Sbjct: 128 FTSRFWGKLQEALGTKLDFSTTFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 187
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLEV 402
F YNNS+ ++I+MAPF+ +YGRR RS +GWLEV
Sbjct: 188 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEV 221
>gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 878
Score = 82.4 bits (202), Expect = 2e-13
Identities = 42/93 (45%), Positives = 57/93 (61%)
Frame = +1
Query: 121 FTSHFWRYIQKELGTRVELSTAFHPQNDNQFK*AI*FLRICCEPA*LTLLVIGINFYSWR 300
FTS FW +Q+ LGT+++ STAFHPQ D Q + I L + L V +
Sbjct: 777 FTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLV 836
Query: 301 SFFYNNSYYSNIEMAPFKVMYGRRPRSLVGWLE 399
F YNNS+ ++I+MAPF+ +YGRR RS +GWLE
Sbjct: 837 EFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLE 869