BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033954
         (554 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   334   1e-89
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   334   1e-89
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   329   3e-88
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   327   9e-88
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         327   9e-88
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   326   3e-87
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   325   6e-87
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   248   7e-64
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   224   1e-56
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   223   2e-56
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   223   2e-56
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   223   2e-56
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   223   2e-56
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   221   1e-55
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   218   8e-55
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...   216   2e-54
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   216   3e-54
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   216   3e-54
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   216   4e-54
emb|CBL69149.1| RNA polymerase [Nuphar advena]                        214   1e-53

>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  334 bits (856), Expect = 1e-89
 Identities = 168/184 (91%), Positives = 170/184 (92%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMG+GKYNLLRRRQIKVETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEY 188

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAASHIGEAIEHEARIHRFLEKTKK NALSGDLE
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLE 308

Query: 12  ETAG 1
           +T G
Sbjct: 309 DTPG 312


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial;
           AltName: Full=NsRpoT-A; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1;
           Flags: Precursor gi|15824083|dbj|BAB69431.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1002

 Score =  334 bits (856), Expect = 1e-89
 Identities = 168/184 (91%), Positives = 170/184 (92%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMG+GKYNLLRRRQIKVETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEY 188

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAASHIGEAIEHEARIHRFLEKTKK NALSGDLE
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLE 308

Query: 12  ETAG 1
           +T G
Sbjct: 309 DTPG 312


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
          Length = 1002

 Score =  329 bits (843), Expect = 3e-88
 Identities = 166/183 (90%), Positives = 168/183 (91%)
 Frame = -3

Query: 549 DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEYQ 370
           DEIQELIEEMNKENEALKTNLQPKQPKTIGGMG+GKYNLLRRRQIKVETEAWEEAAKEYQ
Sbjct: 130 DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNLLRRRQIKVETEAWEEAAKEYQ 189

Query: 369 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEM 190
           ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGA APFFDQLPAEM
Sbjct: 190 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGACAPFFDQLPAEM 249

Query: 189 MAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLEE 10
           MAVITMHK            SARVVQAASHIGEAIEHEARIHRFLEKTKK NALSGDLE+
Sbjct: 250 MAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLED 309

Query: 9   TAG 1
           T G
Sbjct: 310 TPG 312


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
           AltName: Full=NictaRpoT1-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 1B;
           Flags: Precursor
          Length = 1002

 Score =  327 bits (839), Expect = 9e-88
 Identities = 165/184 (89%), Positives = 168/184 (91%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEM+KENEALK NLQPKQPKTIGGMG+GKYN LRRRQIKVETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEY 188

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAAS+IGEAIEHEARIHRFLEKTKK NALSGDLE
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLE 308

Query: 12  ETAG 1
           ET G
Sbjct: 309 ETPG 312


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  327 bits (839), Expect = 9e-88
 Identities = 165/184 (89%), Positives = 168/184 (91%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEM+KENEALK NLQPKQPKTIGGMG+GKYN LRRRQIKVETEAWEEAAKEY
Sbjct: 129 IDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEEAAKEY 188

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 189 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 248

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAAS+IGEAIEHEARIHRFLEKTKK NALSGDLE
Sbjct: 249 MMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLE 308

Query: 12  ETAG 1
           ET G
Sbjct: 309 ETPG 312


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum tuberosum]
          Length = 993

 Score =  326 bits (835), Expect = 3e-87
 Identities = 166/184 (90%), Positives = 169/184 (91%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEMNKENEALKTNLQPKQPKT+GGMGIGKYNLLRRRQIKVETEAWE+AAKEY
Sbjct: 121 IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEY 180

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPY+KSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 181 QELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 240

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAASHIGEAIEHEARIHRFLEKT KKNAL G LE
Sbjct: 241 MMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKT-KKNALDGSLE 299

Query: 12  ETAG 1
           ETAG
Sbjct: 300 ETAG 303


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum lycopersicum]
          Length = 993

 Score =  325 bits (832), Expect = 6e-87
 Identities = 165/184 (89%), Positives = 169/184 (91%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           IDEIQELIEEMNKENEALKTNLQPKQPKT+GGMGIGKYNLLRRRQIKVETEAWE+AAKEY
Sbjct: 121 IDEIQELIEEMNKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEY 180

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELLMDMCEQKLAPNLPY+KSLFLGWFEPL+DAIAAEQKLCDEGKNRGAYAPFFDQLPAE
Sbjct: 181 QELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 240

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK            SARVVQAASHIGEAIEHEARIHRFLEKT KKNAL G LE
Sbjct: 241 MMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKT-KKNALDGSLE 299

Query: 12  ETAG 1
           ETAG
Sbjct: 300 ETAG 303


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  248 bits (633), Expect = 7e-64
 Identities = 125/178 (70%), Positives = 143/178 (80%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +DE+QEL+EE+NK ++        KQPK IGG+  GK+N+LRRRQIK+ETEAWEEAAKEY
Sbjct: 109 VDEVQELVEEVNKGDKL------EKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEY 162

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IAAEQ LC +GKNR AYAP+FD LPA+
Sbjct: 163 RELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPAD 222

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGD 19
           MMAVITMHK            SARVVQAA HIGEAIEHE RI RF+EKTKKK+A S +
Sbjct: 223 MMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNN 280


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
           putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
           DNA-directed RNA polymerase 2, chloroplast/mitochondrial
           precursor, putative [Ricinus communis]
          Length = 997

 Score =  224 bits (570), Expect = 1e-56
 Identities = 115/177 (64%), Positives = 137/177 (77%), Gaps = 6/177 (3%)
 Frame = -3

Query: 549 DEIQELIEEMNKENEALKTNLQPKQP-----KTIGGMGIGKYNLLRRRQIKVETEAWEEA 385
           DE+QE IEE+NK ++ +  + + +Q      KTI GMGIGKY +L++RQIK+ETEAWEEA
Sbjct: 108 DELQEQIEEINKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEA 167

Query: 384 AKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQ 205
           A+EYQELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIA EQ+L  E  N+ ++ P+FD 
Sbjct: 168 AREYQELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKNNKLSHGPYFDA 227

Query: 204 LPAEMMAVITMHKXXXXXXXXXXXXSA-RVVQAASHIGEAIEHEARIHRFLEKTKKK 37
           LPA+MMAVITMHK             + RVVQAA  +GEAIEHEARIHRFLEKTKKK
Sbjct: 228 LPADMMAVITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKK 284


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  223 bits (569), Expect = 2e-56
 Identities = 113/182 (62%), Positives = 135/182 (74%), Gaps = 1/182 (0%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIG-GMGIGKYNLLRRRQIKVETEAWEEAAKE 376
           ++EIQEL++EM KE +    N   +  + +  GMG GKY +L+ RQ+K+ETEAWE+AA E
Sbjct: 151 VEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANE 210

Query: 375 YQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPA 196
           Y+ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA EQ+ C   K++ AYAP+FDQLPA
Sbjct: 211 YRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPA 270

Query: 195 EMMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDL 16
           +MMAVITMHK             ARVVQAA  IG+AIE E RIH+FLEKTKKKN      
Sbjct: 271 DMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKE 330

Query: 15  EE 10
           +E
Sbjct: 331 DE 332


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  223 bits (569), Expect = 2e-56
 Identities = 113/182 (62%), Positives = 135/182 (74%), Gaps = 1/182 (0%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIG-GMGIGKYNLLRRRQIKVETEAWEEAAKE 376
           ++EIQEL++EM KE +    N   +  + +  GMG GKY +L+ RQ+K+ETEAWE+AA E
Sbjct: 151 VEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANE 210

Query: 375 YQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPA 196
           Y+ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA EQ+ C   K++ AYAP+FDQLPA
Sbjct: 211 YRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPA 270

Query: 195 EMMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDL 16
           +MMAVITMHK             ARVVQAA  IG+AIE E RIH+FLEKTKKKN      
Sbjct: 271 DMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKE 330

Query: 15  EE 10
           +E
Sbjct: 331 DE 332


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  223 bits (569), Expect = 2e-56
 Identities = 113/182 (62%), Positives = 135/182 (74%), Gaps = 1/182 (0%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIG-GMGIGKYNLLRRRQIKVETEAWEEAAKE 376
           ++EIQEL++EM KE +    N   +  + +  GMG GKY +L+ RQ+K+ETEAWE+AA E
Sbjct: 151 VEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANE 210

Query: 375 YQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPA 196
           Y+ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA EQ+ C   K++ AYAP+FDQLPA
Sbjct: 211 YRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPA 270

Query: 195 EMMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDL 16
           +MMAVITMHK             ARVVQAA  IG+AIE E RIH+FLEKTKKKN      
Sbjct: 271 DMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKE 330

Query: 15  EE 10
           +E
Sbjct: 331 DE 332


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  223 bits (569), Expect = 2e-56
 Identities = 114/173 (65%), Positives = 138/173 (79%), Gaps = 2/173 (1%)
 Frame = -3

Query: 549 DEIQELIEEMNKENEALKTNLQPKQPK-TIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +EIQE++E++ +EN  ++++   KQPK  + GMG+GKYNLLR+RQIK+ETEAW+EAAKEY
Sbjct: 117 EEIQEMLEDLIRENNMVESHF--KQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEY 174

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           QELL DMCEQKLAPNLPY+KSLFLGWFEPLRDAIAA+Q  C +  +R ++AP+FD LPA+
Sbjct: 175 QELLADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPAD 234

Query: 192 MMAVITMHKXXXXXXXXXXXXSA-RVVQAASHIGEAIEHEARIHRFLEKTKKK 37
            MAVITMHK             + RVVQAA  IGEAIEHE RIHRFLEKTKKK
Sbjct: 235 KMAVITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKK 287


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  221 bits (562), Expect = 1e-55
 Identities = 112/181 (61%), Positives = 134/181 (74%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           ++EIQEL++EM KE ++        + +   GMG GKY +L+ RQ+K+ETEAWE+AA EY
Sbjct: 151 VEEIQELLQEMKKEQQSGGGR---NRRRVARGMGSGKYRMLKMRQVKIETEAWEKAANEY 207

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA EQ+ C   K++ AYAP+FDQLPA+
Sbjct: 208 RELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPAD 267

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDLE 13
           MMAVITMHK             ARVVQAA  IG+AIE E RIH+FLEKTKKKN      +
Sbjct: 268 MMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKED 327

Query: 12  E 10
           E
Sbjct: 328 E 328


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  218 bits (555), Expect = 8e-55
 Identities = 113/171 (66%), Positives = 129/171 (75%)
 Frame = -3

Query: 549 DEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEYQ 370
           DEIQEL+ EM KE +      + ++ K   GM  G+Y  LRRRQ+K+ETEAWE AAKEY+
Sbjct: 158 DEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYK 217

Query: 369 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEM 190
           ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAI  EQ+LC  GKN+ AYAP+FDQLPA+M
Sbjct: 218 ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADM 277

Query: 189 MAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKK 37
           M+VITMHK            S RVVQAA  IG+AIE E RIH FLEKTK+K
Sbjct: 278 MSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRK 328


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  216 bits (551), Expect = 2e-54
 Identities = 107/172 (62%), Positives = 130/172 (75%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +DE+QEL+++M+ E +      Q  +     GMG GKY++L+RRQIK+ETEAWE AAKEY
Sbjct: 149 VDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKEY 208

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +EL+MDMCEQKLAPNLPYMKSLFLGWFEPLR+AI  EQ LC +GKN+ AYAP+ DQLPA+
Sbjct: 209 RELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPAD 268

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKK 37
           MM+VITMHK            + RVV AA  IGEAIE E RIH+FLE T+KK
Sbjct: 269 MMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKK 320


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  216 bits (550), Expect = 3e-54
 Identities = 109/174 (62%), Positives = 129/174 (74%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +DE+ EL+ E+ KE +      + KQ     GMG  KY  L+RRQ+KVETEAWE+AAKEY
Sbjct: 145 VDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEY 204

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA +F QLPA+
Sbjct: 205 KELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPAD 264

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNA 31
           MMAVITMHK            +ARVVQAA  IG+AIE E RIH FLEKTKK+ A
Sbjct: 265 MMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 318


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  216 bits (550), Expect = 3e-54
 Identities = 109/174 (62%), Positives = 129/174 (74%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +DE+ EL+ E+ KE +      + KQ     GMG  KY  L+RRQ+KVETEAWE+AAKEY
Sbjct: 145 VDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEY 204

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA +F QLPA+
Sbjct: 205 KELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPAD 264

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNA 31
           MMAVITMHK            +ARVVQAA  IG+AIE E RIH FLEKTKK+ A
Sbjct: 265 MMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 318


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  216 bits (549), Expect = 4e-54
 Identities = 109/174 (62%), Positives = 129/174 (74%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKEY 373
           +DE+QEL+ E+ KE +      + KQ     GMG  KY  L+RRQ+KVETEAWE+AAKEY
Sbjct: 146 VDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEY 205

Query: 372 QELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAE 193
           +ELL DMCEQKLAPNLPY+KSLFLGWFEPLRD IA EQ+LC +GK++ AYA +  QLPA+
Sbjct: 206 KELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPAD 265

Query: 192 MMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNA 31
           MMAVITMHK            +ARVVQAA  IG+AIE E RIH FLEKTKK+ A
Sbjct: 266 MMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKA 319


>emb|CBL69149.1| RNA polymerase [Nuphar advena]
          Length = 996

 Score =  214 bits (544), Expect = 1e-53
 Identities = 111/181 (61%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
 Frame = -3

Query: 552 IDEIQELIEEMNKENEALKTN-LQPKQPKTIGGMGIGKYNLLRRRQIKVETEAWEEAAKE 376
           I+EIQ L+EE+++E    KT     K     G +G GKY   +RRQIK+ETEAWE+AA+E
Sbjct: 123 IEEIQGLLEELSEEVARQKTGEFDAKNKPNFGDLGFGKYKAQKRRQIKIETEAWEQAARE 182

Query: 375 YQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPA 196
           Y+EL +DMC+QKLAPNLPYMKSLFLGWFEPLRD IAAEQ+   +GK+R AYA + D LPA
Sbjct: 183 YRELFVDMCKQKLAPNLPYMKSLFLGWFEPLRDRIAAEQESYRKGKSRAAYARYIDHLPA 242

Query: 195 EMMAVITMHKXXXXXXXXXXXXSARVVQAASHIGEAIEHEARIHRFLEKTKKKNALSGDL 16
           +M+AVITMHK             ARVVQAA  IGEAIE+EARIHRFLEKTKKK A +   
Sbjct: 243 DMVAVITMHKLMGLMMTSNDNGCARVVQAACQIGEAIENEARIHRFLEKTKKKPANANKA 302

Query: 15  E 13
           E
Sbjct: 303 E 303