BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033933
         (522 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...   166   4e-39
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A...   124   2e-26
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A...   124   2e-26
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...   122   6e-26
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...   122   6e-26
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...   121   1e-25
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...   120   2e-25
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A...   115   6e-24
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A...   103   2e-20
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588...   100   3e-19
ref|XP_004251353.1| PREDICTED: uncharacterized protein LOC101256...    69   5e-12
emb|CBI39734.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]    72   1e-10
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597...    69   6e-10
emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]    67   2e-09
emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]    67   2e-09
emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]    67   2e-09
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    66   4e-09
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]    66   6e-09
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]    65   7e-09

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score =  166 bits (419), Expect = 4e-39
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCKWT++LW+ FI  R+IK  K  SI  VL  W RDGNA K E+RW+IVP+CIWWT+W
Sbjct: 110 FLHCKWTDQLWQMFIQKRKIKWTKPGSIIEVLQCWNRDGNAGKNEKRWRIVPACIWWTIW 169

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERNQRCFEGKQN +QK K NCL LYYFWCKQVV+   E++F+++D L
Sbjct: 170 KERNQRCFEGKQNNIQKIKTNCLGLYYFWCKQVVIGDAENVFNIIDWL 217


>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 399

 Score =  124 bits (310), Expect = 2e-26
 Identities = 52/108 (48%), Positives = 69/108 (63%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCK+T++LW+ F+SL+ I     R I   L SW   G   K+  RW+I+P+ IWW  W
Sbjct: 292 FLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATW 351

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCFE  +N +QK K+NC+ L  FWC Q+   +T  I DVLDS+
Sbjct: 352 KERNSRCFESVENSMQKVKLNCILLLCFWCNQLYSNETVSIIDVLDSI 399


>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 323

 Score =  124 bits (310), Expect = 2e-26
 Identities = 52/108 (48%), Positives = 69/108 (63%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCK+T++LW+ F+SL+ I     R I   L SW   G   K+  RW+I+P+ IWW  W
Sbjct: 216 FLHCKFTQQLWRVFLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATW 275

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCFE  +N +QK K+NC+ L  FWC Q+   +T  I DVLDS+
Sbjct: 276 KERNSRCFESVENSMQKVKLNCILLLCFWCNQLYSNETVSIIDVLDSI 323


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/108 (47%), Positives = 68/108 (62%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCK+T +LW+ F+SL+ I     R +   L SW   G   K+  RW+I+P+ IWW +W
Sbjct: 343 FLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIW 402

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCFEG +N +Q  K+NC+ L  FWC Q+    T  I DVLDS+
Sbjct: 403 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQLYSNDTASIVDVLDSI 450


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score =  122 bits (305), Expect = 6e-26
 Identities = 51/108 (47%), Positives = 68/108 (62%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCK+T +LW+ F+SL+ I     R +   L SW   G   K+  RW+I+P+ IWW +W
Sbjct: 449 FLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIW 508

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCFEG +N +Q  K+NC+ L  FWC Q+    T  I DVLDS+
Sbjct: 509 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQLYSNDTASIVDVLDSI 556


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score =  121 bits (303), Expect = 1e-25
 Identities = 45/108 (41%), Positives = 67/108 (62%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHC +T ++W  F+S+  +          VL SW+R G    ++  W+++PSCIWW+VW
Sbjct: 177 FLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGGTKSQKRWWRLIPSCIWWSVW 236

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCF+ + N + K K NC+    FWCKQ+ +V T+ I D++ SL
Sbjct: 237 KERNSRCFDNRSNSIHKVKWNCIVSLLFWCKQLCIVDTDQIVDLIGSL 284


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score =  120 bits (301), Expect = 2e-25
 Identities = 44/108 (40%), Positives = 68/108 (62%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHC +T ++W  F+S+  +          VL SW+R G+   ++  W+++PSCIWW+VW
Sbjct: 410 FLHCNYTAQIWNLFLSISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVW 469

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCF+ + N + K K NC+    FWCKQ+ +V T+ I D++ +L
Sbjct: 470 KERNNRCFDNRSNSIHKVKWNCIVSLLFWCKQLCIVDTDQIVDLIGNL 517


>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Solanum tuberosum]
          Length = 284

 Score =  115 bits (288), Expect = 6e-24
 Identities = 43/108 (39%), Positives = 67/108 (62%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHC +T ++W  F+++  +          VL SW+R G+   ++  W+++PSCIWW+VW
Sbjct: 177 FLHCNYTAQIWNLFLNISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVW 236

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN RCF+ + N + K K NC+    F CKQ+ +V T+ I D++ SL
Sbjct: 237 KERNSRCFDNRSNSIHKVKWNCIVSLLFLCKQLCIVDTDQIVDLIGSL 284


>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 397

 Score =  103 bits (257), Expect = 2e-20
 Identities = 46/108 (42%), Positives = 60/108 (55%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVW 342
           FLHCK   KLW  F S R I           L SW  +G+ + ++ RWKIVP+ IWWT+W
Sbjct: 290 FLHCKVVGKLWNLFTSFRGISWTVPGRTGQALESWNMEGSGSTDKSRWKIVPAVIWWTIW 349

Query: 341 NERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
            ERN R F+ K + L K KMNC+  + +WC    +     I D+L SL
Sbjct: 350 KERNSRNFDNKSSPLHKIKMNCIITFCYWCSSEYIDDPVAIVDILGSL 397


>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
          Length = 255

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATK-EEERWKIVPSCIWWTV 345
           FLHC+    LW  F+ +  +  V  ++   +L  W   G   + +E+ WK +P+CIWWT+
Sbjct: 147 FLHCRTAANLWNMFLCILGVNWVMPKTTLELLRQWEGVGRRRRSKEDWWKCIPACIWWTL 206

Query: 344 WNERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFD 213
           W ERN+R  +GK N  QK KMN L+L YFWCKQ ++ + + + D
Sbjct: 207 WKERNERSHDGKLNSTQKIKMNSLSLLYFWCKQDLVGEVDSLVD 250


>ref|XP_004251353.1| PREDICTED: uncharacterized protein LOC101256352 [Solanum
           lycopersicum]
          Length = 1884

 Score = 68.6 bits (166), Expect(2) = 5e-12
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = -2

Query: 521 FLHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIV 369
           FLHCKWT +LW+ FISL+ I  VK  SI  VL  W  DGN +K+ ERWKIV
Sbjct: 761 FLHCKWTHQLWRMFISLKVISWVKPGSIADVLRCWNMDGNVSKKGERWKIV 811



 Score = 27.7 bits (60), Expect(2) = 5e-12
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 376 RLSHHAYGGLCGMKGIRGA 320
           ++ HHA+GG  G++G RG+
Sbjct: 809 KIVHHAFGGQFGLRGTRGS 827


>emb|CBI39734.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = -2

Query: 509 KWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWNERN 330
           KW   LW+   +L  +  V   S  GVL SW       K ++ WK+ P CI+W++W ERN
Sbjct: 557 KWFYTLWQLVYALFHVPWVMHSSKRGVLLSWNGVPIGKKRKKAWKVAPLCIFWSIWRERN 616

Query: 329 QRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
           +R FE +++  Q FK   L L++ W +  +      + D +D L
Sbjct: 617 RRAFEDRESLDQTFKSYFLYLFWDWVRVYMGDSISSLIDFVDWL 660


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/107 (30%), Positives = 58/107 (54%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           +HC   + LW   ++L  ++ V   S+E VL+SW       K +E WK +P  I+WT+W 
Sbjct: 355 IHCTVAKGLWNIILALCGVQWVFPNSVEEVLSSWKGSFVGRKRKEVWKAIPLFIFWTIWK 414

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
           ERN+  F+G     QK K + + + + W K  + ++++ +   L+ L
Sbjct: 415 ERNRLAFKGGVLAFQKLKTSLVYIIWSWAKVYIDMESKSLIGFLEWL 461


>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
          Length = 305

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 32/107 (29%), Positives = 51/107 (47%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           LHC+   +LW  F  L  I      +++    SW         ++ W ++P+CI+W++W 
Sbjct: 196 LHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIWIMIPACIFWSIWL 255

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
           ERN+RCF+G+   L   K  C    + W      V  E + D  +SL
Sbjct: 256 ERNKRCFDGESTALGILKTRCTENLFSWTNLYPAVNAEQLQDFTNSL 302


>emb|CAN70195.1| hypothetical protein VITISV_001356 [Vitis vinifera]
          Length = 782

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/107 (28%), Positives = 57/107 (53%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           +HC   + LW   ++L  ++ V   S++ VL+SW       K +E WK +P  I+W +W 
Sbjct: 673 IHCTVAKGLWNIILALCGVQWVFPNSVKEVLSSWKGSFVGRKRKEVWKAIPLFIFWNIWK 732

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
           ERN+  F+G     QK K + + + + W K  + ++++ +   L+ L
Sbjct: 733 ERNRLAFKGGVLDCQKLKTSLVYIIWGWAKVYINMESKSLIGFLEWL 779


>emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]
          Length = 563

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/105 (29%), Positives = 56/105 (53%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           +HC   + LW   ++L  ++ V   S++ VL+SW       K +E WK +P  I+WT+W 
Sbjct: 454 IHCTVAKGLWNIILALCGVQWVFPNSVKEVLSSWKGSFVGRKRKEVWKSIPLFIFWTIWK 513

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLD 204
           ERN+  F+G     QK K + +   + W K  + ++++ +   L+
Sbjct: 514 ERNRLAFKGGVLAYQKLKTSLVYSIWGWAKVYIDMESKSLIGFLE 558


>emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]
          Length = 613

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/107 (28%), Positives = 57/107 (53%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           +HC   + LW   + L  ++ V   S++ VL+SW       K ++ WK +P  I+WT+W 
Sbjct: 504 IHCTMAKGLWNIILVLCGVQWVFPNSVKEVLSSWKGSFVGRKRKKVWKSIPLFIFWTIWK 563

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLDSL 198
           ERN+  F+G     QK K + + + + W K  + ++++ +   L+ L
Sbjct: 564 ERNKLAFKGGVLAYQKLKTSLVYIIWGWAKVYIDMESKSLIGFLEWL 610


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/105 (28%), Positives = 56/105 (53%)
 Frame = -2

Query: 518 LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
           +HC   + LW   ++L  ++ V   S++ VL+SW       K ++ WK +P  I+WT+W 
Sbjct: 294 IHCTVAKGLWDIILALCGVQWVLPNSVKEVLSSWKGSFVGRKRKKVWKSIPLFIFWTIWK 353

Query: 338 ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLD 204
           ERN+  F+G     QK K + +  ++ W K  + +++  +   L+
Sbjct: 354 ERNRLAFKGGVLAFQKLKTSFVYNFWGWAKVYIDMESNSLIGFLE 398


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 30/105 (28%), Positives = 56/105 (53%)
 Frame = -2

Query: 518  LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
            +HC   + LW   ++L  ++ V   S++ VL+SW       K ++ WK +P  I+WT+W 
Sbjct: 1719 IHCTVAKGLWDIILALCGVQWVFPNSVKEVLSSWKGSFVGRKRKKVWKSIPLFIFWTIWK 1778

Query: 338  ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLD 204
            ERN+  F+G     QK K + +  ++ W K  + +++  +   L+
Sbjct: 1779 ERNRLAFKGGVLAFQKLKTSFVYNFWGWAKVYIDMESNSLIGFLE 1823


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/105 (28%), Positives = 55/105 (52%)
 Frame = -2

Query: 518  LHCKWTEKLWKTFISLRRIKRVKSRSIEGVLNSWIRDGNATKEEERWKIVPSCIWWTVWN 339
            +HC   + LW    +L  ++ V   S++ VL+SW       K ++ WK +P  I+WT+W 
Sbjct: 921  IHCTVAKGLWDIIFALCGVQWVFPNSVKEVLSSWKSSFVGRKRKKVWKSIPLFIFWTIWK 980

Query: 338  ERNQRCFEGKQNYLQKFKMNCLTLYYFWCKQVVLVQTEDIFDVLD 204
            ERN+  F+G     QK K + +  ++ W K  + +++  +   L+
Sbjct: 981  ERNRLAFKGGVLAFQKLKTSFVYNFWGWAKVYIDMESNSLIGFLE 1025