BLASTX nr result

ID: Atropa21_contig00033869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033869
         (594 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    72   8e-11
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          56   1e-06

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
 Frame = -3

Query: 550 LIRLELLKYYVKL-SNPVYYIKVHFRYF*MRTEIWNP*FKPSEETFVVVAWISFSELPPN 374
           LIR  LL+ YVKL S P +YI  +   + MRT  W+P F P EET   +AWISF  LPPN
Sbjct: 83  LIRASLLEDYVKLLSKPQFYITHNHWSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPPN 142

Query: 373 SFAKDAIFSLASEARFKRNIIVKTLHNQKIHNHKSELLVSRSNTCRPKGVKIKQ 212
            F K+ IFS+A+       + + T +  K    ++E    + +    KG +  Q
Sbjct: 143 FFGKETIFSMAAAVGRPLQVDLATQNKTKPSCARTEEKEQKQDNKENKGERGNQ 196


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 56.2 bits (134), Expect(2) = 1e-06
 Identities = 27/57 (47%), Positives = 36/57 (63%)
 Frame = -3

Query: 550 LIRLELLKYYVKLSNPVYYIKVHFRYF*MRTEIWNP*FKPSEETFVVVAWISFSELP 380
           LIRL LL+ Y  L +  + ++V  RYF +R   W+P F P EET + +AWISF  LP
Sbjct: 67  LIRLSLLEDYATLMSKAWELRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISFPGLP 123



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 593 IKGPCTIELMKDRQV 549
           IKGPC I  +++R +
Sbjct: 52  IKGPCNIGFLEERHI 66


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