BLASTX nr result

ID: Atropa21_contig00033514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033514
         (528 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360189.1| PREDICTED: reticulon-like protein B2-like [S...    60   4e-07
ref|XP_004240710.1| PREDICTED: reticulon-like protein B5-like [S...    59   9e-07

>ref|XP_006360189.1| PREDICTED: reticulon-like protein B2-like [Solanum tuberosum]
          Length = 253

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = -3

Query: 445 MADHAGDNDSFVDSVMDKVNXXXXXXXXXXXXXXXXXXXXXXSVDAVKSKIYRLFGRERP 266
           MADHAG+NDSFVDSVMDKVN                       V+AVK+KIYRLFGRE+P
Sbjct: 1   MADHAGENDSFVDSVMDKVN--DKLHSHDSSSDSDDDKGKRSPVNAVKTKIYRLFGREKP 58

Query: 265 V 263
           +
Sbjct: 59  L 59


>ref|XP_004240710.1| PREDICTED: reticulon-like protein B5-like [Solanum lycopersicum]
          Length = 253

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/61 (54%), Positives = 37/61 (60%)
 Frame = -3

Query: 445 MADHAGDNDSFVDSVMDKVNXXXXXXXXXXXXXXXXXXXXXXSVDAVKSKIYRLFGRERP 266
           MADHAG+NDSFVDSV DKVN                       V+AVK+KIYRLFGRE+P
Sbjct: 1   MADHAGENDSFVDSVTDKVN--DKFHSHDYSSDSDDDKGKKSPVNAVKTKIYRLFGREKP 58

Query: 265 V 263
           V
Sbjct: 59  V 59


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