BLASTX nr result
ID: Atropa21_contig00033381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033381
(536 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341550.1| PREDICTED: probable ATP-dependent RNA helica... 104 1e-20
ref|XP_004235749.1| PREDICTED: probable ATP-dependent RNA helica... 104 1e-20
gb|EOY21157.1| DEA(D/H)-box RNA helicase family protein isoform ... 83 3e-14
ref|XP_006490712.1| PREDICTED: probable ATP-dependent RNA helica... 82 1e-13
ref|XP_006490711.1| PREDICTED: probable ATP-dependent RNA helica... 82 1e-13
ref|XP_006451692.1| hypothetical protein CICLE_v10007274mg [Citr... 82 1e-13
ref|XP_006451691.1| hypothetical protein CICLE_v10007274mg [Citr... 82 1e-13
gb|EOY21156.1| DEA(D/H)-box RNA helicase family protein isoform ... 82 1e-13
ref|XP_004301269.1| PREDICTED: probable ATP-dependent RNA helica... 81 1e-13
gb|EMJ10270.1| hypothetical protein PRUPE_ppa000376mg [Prunus pe... 81 1e-13
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica... 80 3e-13
emb|CBI15516.3| unnamed protein product [Vitis vinifera] 80 3e-13
emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera] 80 3e-13
gb|EXB30260.1| putative ATP-dependent RNA helicase DHX36 [Morus ... 80 4e-13
tpg|DAA53731.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m... 78 1e-12
ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu... 77 2e-12
ref|XP_006306606.1| hypothetical protein CARUB_v10008118mg [Caps... 77 3e-12
ref|XP_002894123.1| helicase domain-containing protein [Arabidop... 77 3e-12
ref|XP_002315906.2| hypothetical protein POPTR_0010s12780g [Popu... 75 7e-12
gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali... 75 7e-12
>ref|XP_006341550.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1205
Score = 104 bits (259), Expect = 1e-20
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK MDSLR+QFL+LLKDIGLVDS QSCNAWSNNEHLVR I+CGGLF GICS
Sbjct: 882 NFLSA--QTLKAMDSLRKQFLYLLKDIGLVDSIQSCNAWSNNEHLVRAIVCGGLFPGICS 939
Query: 326 VV 321
VV
Sbjct: 940 VV 941
>ref|XP_004235749.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
lycopersicum]
Length = 1201
Score = 104 bits (259), Expect = 1e-20
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK MDSLR+QFL+LLKDIGLVDS QSCNAWSNNEHLVR I+CGGLF GICS
Sbjct: 878 NFLSA--QTLKAMDSLRKQFLYLLKDIGLVDSIQSCNAWSNNEHLVRAIVCGGLFPGICS 935
Query: 326 VV 321
VV
Sbjct: 936 VV 937
>gb|EOY21157.1| DEA(D/H)-box RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 971
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/64 (64%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QF +LLKD GLVD + ++CN WS +EHL+R +IC GLF GIC
Sbjct: 872 NFLSA--QTLKAIDSLRKQFFYLLKDTGLVDQNIENCNKWSYDEHLIRAVICAGLFPGIC 929
Query: 329 SVVV 318
SVVV
Sbjct: 930 SVVV 933
>ref|XP_006490712.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X2 [Citrus sinensis]
Length = 964
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QFL LLKD GLVD + ++CN WS++EHL+R +IC GLF G+C
Sbjct: 639 NFLSA--QTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLC 696
Query: 329 SVV 321
SVV
Sbjct: 697 SVV 699
>ref|XP_006490711.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform X1
[Citrus sinensis]
Length = 1197
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QFL LLKD GLVD + ++CN WS++EHL+R +IC GLF G+C
Sbjct: 872 NFLSA--QTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLC 929
Query: 329 SVV 321
SVV
Sbjct: 930 SVV 932
>ref|XP_006451692.1| hypothetical protein CICLE_v10007274mg [Citrus clementina]
gi|557554918|gb|ESR64932.1| hypothetical protein
CICLE_v10007274mg [Citrus clementina]
Length = 1009
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QFL LLKD GLVD + ++CN WS++EHL+R +IC GLF G+C
Sbjct: 872 NFLSA--QTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLC 929
Query: 329 SVV 321
SVV
Sbjct: 930 SVV 932
>ref|XP_006451691.1| hypothetical protein CICLE_v10007274mg [Citrus clementina]
gi|557554917|gb|ESR64931.1| hypothetical protein
CICLE_v10007274mg [Citrus clementina]
Length = 1197
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QFL LLKD GLVD + ++CN WS++EHL+R +IC GLF G+C
Sbjct: 872 NFLSA--QTLKAIDSLRKQFLFLLKDAGLVDRNTENCNKWSHDEHLIRAVICAGLFPGLC 929
Query: 329 SVV 321
SVV
Sbjct: 930 SVV 932
>gb|EOY21156.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1193
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QF +LLKD GLVD + ++CN WS +EHL+R +IC GLF GIC
Sbjct: 872 NFLSA--QTLKAIDSLRKQFFYLLKDTGLVDQNIENCNKWSYDEHLIRAVICAGLFPGIC 929
Query: 329 SVV 321
SVV
Sbjct: 930 SVV 932
>ref|XP_004301269.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Fragaria
vesca subsp. vesca]
Length = 1216
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK +DSLR+QF LLKD GLVD+ ++CN S++EHL+R IIC GLF GICS
Sbjct: 884 NFLSA--QTLKAIDSLRKQFFFLLKDAGLVDNTENCNTLSHDEHLIRAIICAGLFPGICS 941
Query: 326 VV 321
VV
Sbjct: 942 VV 943
>gb|EMJ10270.1| hypothetical protein PRUPE_ppa000376mg [Prunus persica]
Length = 1230
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSF-QSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR+QF LLKD GLVD ++CN WS++EHLVR +IC GLF GIC
Sbjct: 898 NFLSA--QTLKSIDSLRKQFFFLLKDTGLVDHHTETCNTWSHDEHLVRAVICAGLFPGIC 955
Query: 329 SVV 321
SVV
Sbjct: 956 SVV 958
>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1178
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDS-FQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR QF +LLKD GLV++ ++CN WS++EHL+R +IC GLF GIC
Sbjct: 855 NFLSA--QTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGIC 912
Query: 329 SVV 321
SVV
Sbjct: 913 SVV 915
>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
Length = 1057
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDS-FQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR QF +LLKD GLV++ ++CN WS++EHL+R +IC GLF GIC
Sbjct: 734 NFLSA--QTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGIC 791
Query: 329 SVV 321
SVV
Sbjct: 792 SVV 794
>emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]
Length = 558
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/63 (61%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDS-FQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTLK +DSLR QF +LLKD GLV++ ++CN WS++EHL+R +IC GLF GIC
Sbjct: 235 NFLSA--QTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGIC 292
Query: 329 SVV 321
SVV
Sbjct: 293 SVV 295
>gb|EXB30260.1| putative ATP-dependent RNA helicase DHX36 [Morus notabilis]
Length = 1349
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/63 (63%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSF-QSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL+ QTL+ +DSLR+QF +LLKD GLVD +SCN +S+NEHL+R+IIC GLF G+C
Sbjct: 1017 NFLSA--QTLRAIDSLRKQFFYLLKDTGLVDQTKESCNLFSHNEHLIRSIICAGLFPGLC 1074
Query: 329 SVV 321
SVV
Sbjct: 1075 SVV 1077
>tpg|DAA53731.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
Length = 1125
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL++ QTLK +DSLR QFL LLKD GLVD + CN WS +E+LVR +IC GL+ G+
Sbjct: 1051 NFLSV--QTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWSRDENLVRAVICAGLYPGVS 1108
Query: 329 SVVVSYALL 303
SV+VS+ L
Sbjct: 1109 SVLVSFFYL 1117
>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1172
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/63 (60%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVD-SFQSCNAWSNNEHLVRTIICGGLFHGIC 330
NFL++ Q++K +DSLR++FL LLKD GLVD S CN WS+ EHL+R +IC GL+ GIC
Sbjct: 851 NFLSM--QSMKAIDSLRKEFLSLLKDAGLVDGSITFCNTWSHEEHLIRAVICYGLYPGIC 908
Query: 329 SVV 321
SVV
Sbjct: 909 SVV 911
>ref|XP_006306606.1| hypothetical protein CARUB_v10008118mg [Capsella rubella]
gi|482575317|gb|EOA39504.1| hypothetical protein
CARUB_v10008118mg [Capsella rubella]
Length = 1198
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK MDS+R+QF +LLK+ L+D+ + C+ S++EHLVR IIC GLF GICS
Sbjct: 873 NFLSS--QTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGLFPGICS 930
Query: 326 VV 321
VV
Sbjct: 931 VV 932
>ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297339965|gb|EFH70382.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1197
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK MDS+R+QF +LLK+ L+D+ + C+ S++EHLVR IIC GLF GICS
Sbjct: 873 NFLSS--QTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGLFPGICS 930
Query: 326 VV 321
VV
Sbjct: 931 VV 932
>ref|XP_002315906.2| hypothetical protein POPTR_0010s12780g [Populus trichocarpa]
gi|550329675|gb|EEF02077.2| hypothetical protein
POPTR_0010s12780g [Populus trichocarpa]
Length = 1217
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQS-CNAWSNNEHLVRTIICGGLFHGIC 330
NFL++ Q++K +DSLR++F LL D GLVD + CNAWS++EHLVR +IC GL+ GIC
Sbjct: 896 NFLSV--QSMKAIDSLRKEFFSLLMDTGLVDGNPTTCNAWSHDEHLVRAVICSGLYPGIC 953
Query: 329 SVV 321
S+V
Sbjct: 954 SIV 956
>gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
Length = 1167
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = -1
Query: 506 NFLNIYFQTLKGMDSLREQFLHLLKDIGLVDSFQSCNAWSNNEHLVRTIICGGLFHGICS 327
NFL+ QTLK MDS+R+QF +LLK+ L+D+ + C+ S++EHLVR IIC G+F G+CS
Sbjct: 843 NFLSS--QTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCS 900
Query: 326 VV 321
VV
Sbjct: 901 VV 902