BLASTX nr result
ID: Atropa21_contig00033351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033351
(2647 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 709 0.0
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 704 0.0
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 681 0.0
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 680 0.0
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 678 0.0
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 675 0.0
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 672 0.0
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 667 0.0
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 667 0.0
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 667 0.0
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 665 0.0
gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, puta... 664 0.0
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta... 664 0.0
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus... 664 0.0
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 659 0.0
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 658 0.0
ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase ... 657 0.0
gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus pe... 648 0.0
ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutr... 647 0.0
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 644 0.0
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 709 bits (1829), Expect(4) = 0.0
Identities = 361/440 (82%), Positives = 384/440 (87%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVDSSGKCVILCHAPRK YYKKFLYEAFPVESHLQHYLHDN
Sbjct: 1709 TDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQHYLHDNL 1768
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVV GVIQ+KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSD LSELVENT+ DL
Sbjct: 1769 NAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDQLSELVENTISDL 1828
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCVT+ED+ LLSP+ LGMIA ERF EILASASE+E
Sbjct: 1829 EASKCVTIEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLLEILASASEFE 1888
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEELIRRLINH RFSFENPKY DPHVKANALLQAHFSRQMV GNLASDQQEVL
Sbjct: 1889 QLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSRQMVGGNLASDQQEVL 1948
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL+LALL ME+SQMVTQGMWERDS+LLQLPHFTKELAKKCQE
Sbjct: 1949 LSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQE 2008
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
+SI TVFDLVEMEDDER ELLQMS+ QL+DIAR C+ +PNIDLTY+V+D NV AGD
Sbjct: 2009 NPGRSIETVFDLVEMEDDERRELLQMSDLQLLDIARFCNRFPNIDLTYDVLDSDNVSAGD 2068
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
DVS+QVT LEGRTEVGPVFAPRYPK KEEGWWLVVGDTKSNQLLAIKRVTLQRKS+V
Sbjct: 2069 DVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKV 2128
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDF APAEAGTRNYTLYFM
Sbjct: 2129 KLDFAAPAEAGTRNYTLYFM 2148
Score = 308 bits (788), Expect(4) = 0.0
Identities = 151/169 (89%), Positives = 159/169 (94%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN AYEALY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1342 RNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1401
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S +RAVYIAP EALAK ++NDWK KFGD LGMRVVELTGET DLKLLEKGQLIISTPEK
Sbjct: 1402 STIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEK 1461
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGP+LEVIVSRM+YISSQ
Sbjct: 1462 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQ 1510
Score = 196 bits (498), Expect(4) = 0.0
Identities = 95/109 (87%), Positives = 100/109 (91%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1513 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHAR GKPA+VYVP RKHAR+ AVDLMTYS MDSEDT F
Sbjct: 1573 TKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIF 1621
Score = 157 bits (398), Expect(4) = 0.0
Identities = 74/89 (83%), Positives = 79/89 (88%)
Frame = +2
Query: 836 VFLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMS 1015
+FLL+S ELEPFVERINE ML+ETLKYGVGYLHEGLS TDQDI+KT ETGWIQVCVM+
Sbjct: 1620 IFLLRSAEELEPFVERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMN 1679
Query: 1016 STMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
TMCW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1680 GTMCWGVPLSAHLVVVMGTQYYDGRENAH 1708
Score = 130 bits (328), Expect(2) = 3e-54
Identities = 110/374 (29%), Positives = 169/374 (45%), Gaps = 28/374 (7%)
Frame = +2
Query: 47 NPVQTQVFTVLYNSDDNVLVAAPTGSGKI------ICAEFAILRNHQEGP--DSILRAVY 202
N VQ++V+ S +N+L+ APTG+GK I + A+ RN +G + + VY
Sbjct: 510 NRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNNYKIVY 569
Query: 203 IAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKWDALSRS 382
+AP +AL + K+ + G+ V EL+G+ T+ + +E+ Q+I++TPEKWD ++R
Sbjct: 570 VAPMKALVAEVVGNLSKRL-EHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRK 628
Query: 383 WKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR----MQYISSQGR*QDSSCYFVEFS 550
R + Q V L I+DE+HL+ GPVLE I++R ++ R S +
Sbjct: 629 SGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIIARTIRQIETTKEHIRLVGLSATLPNYE 688
Query: 551 G*CQGFGGMDWGYGSWPFQLSSRCKARAAGNTYSGCR---------------YSKL*G*D 685
F +D G + F S R A Y G Y K+
Sbjct: 689 D-VAVFLRVDLKKGLFHFDNSYRPVPLA--QQYIGITVKKPLQRFQLMNDVCYEKVISIA 745
Query: 686 ASHD-KTHAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFLLQSRTE 862
H HS T K + +T + D L R LLQS+TE
Sbjct: 746 GKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLK-EDSLTRE--------LLQSQTE 796
Query: 863 LEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCWAVPL 1042
L + LK+ L YG H G+ TD+ +++ G +QV V ++T+ W V L
Sbjct: 797 L------VKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 850
Query: 1043 SAHLVVVMGTQQYD 1084
AH V++ GTQ Y+
Sbjct: 851 PAHTVIIKGTQIYN 864
Score = 110 bits (276), Expect(2) = 3e-54
Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 7/320 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R D+ G+ +IL +YY + + P+ES L D
Sbjct: 871 TELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQL 930
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHR---HLSDHLSELVENTL 1451
N E+V G + + ++A L T++Y R+ +NP Y L + + L + ++LV +
Sbjct: 931 NAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTDYALEERRADLVHSAA 990
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 991 ILLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1050
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ SR + G +L+SD
Sbjct: 1051 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISRLKLEGLSLSSD 1109
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA+RL++A+ +++ GW LA A++ +M+++ MW + L Q E+
Sbjct: 1110 MVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQTPLRQFHGIPNEIL 1169
Query: 1986 KKCQEKSIV--TVFDLVEME 2039
K ++K + +DL E
Sbjct: 1170 MKLEKKDLAWERYYDLSSQE 1189
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 704 bits (1816), Expect(4) = 0.0
Identities = 360/440 (81%), Positives = 382/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVDSSGKCVILCHAPRK YYKKFLYEAFPVESHLQHYLHDN
Sbjct: 1709 TDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVESHLQHYLHDNL 1768
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVV GVIQ+KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSD LSELVENT+ DL
Sbjct: 1769 NAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDQLSELVENTISDL 1828
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCVTVED+ LLSP+ LGMIA ERF EILASASE+E
Sbjct: 1829 EASKCVTVEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLLEILASASEFE 1888
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEELIRRLINH RFSFENPKY DPHVKANALLQAHFSRQMV GNLASDQQEVL
Sbjct: 1889 QLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSRQMVGGNLASDQQEVL 1948
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL+LALL ME+SQMVTQGMWERDS+LLQLPHFTKELAKKCQE
Sbjct: 1949 LSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQE 2008
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
+SI TVFDLVEMED+ER ELLQMS+ QL+DIAR C+ +PNIDLTY V+D NV AGD
Sbjct: 2009 NPGRSIETVFDLVEMEDNERRELLQMSDLQLLDIARFCNRFPNIDLTYHVVDSDNVSAGD 2068
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
DVS+QVT LEGRTEVGPVFAPRYPK KEEGWWLVVGDTKSNQLLAIKRVTLQRKS+V
Sbjct: 2069 DVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAIKRVTLQRKSKV 2128
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDF APAEAG RNYTLYFM
Sbjct: 2129 KLDFAAPAEAGMRNYTLYFM 2148
Score = 308 bits (788), Expect(4) = 0.0
Identities = 151/169 (89%), Positives = 159/169 (94%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN AYEALY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1342 RNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1401
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S +RAVYIAP EALAK ++NDWK KFGD LGMRVVELTGET DLKLLEKGQLIISTPEK
Sbjct: 1402 STIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIISTPEK 1461
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGP+LEVIVSRM+YISSQ
Sbjct: 1462 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQ 1510
Score = 196 bits (498), Expect(4) = 0.0
Identities = 95/109 (87%), Positives = 100/109 (91%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1513 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHAR GKPA+VYVP RKHAR+ AVDLMTYS MDSEDT F
Sbjct: 1573 TKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIF 1621
Score = 157 bits (398), Expect(4) = 0.0
Identities = 74/89 (83%), Positives = 79/89 (88%)
Frame = +2
Query: 836 VFLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMS 1015
+FLL+S ELEPFVERINE ML+ETLKYGVGYLHEGLS TDQDI+KT ETGWIQVCVM+
Sbjct: 1620 IFLLRSAEELEPFVERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMN 1679
Query: 1016 STMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
TMCW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1680 GTMCWGVPLSAHLVVVMGTQYYDGRENAH 1708
Score = 131 bits (329), Expect(2) = 2e-54
Identities = 111/374 (29%), Positives = 169/374 (45%), Gaps = 28/374 (7%)
Frame = +2
Query: 47 NPVQTQVFTVLYNSDDNVLVAAPTGSGKI------ICAEFAILRNHQEGP--DSILRAVY 202
N VQ++V+ S +N+L+ APTG+GK I + A+ RN +G + + VY
Sbjct: 510 NRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNNYKIVY 569
Query: 203 IAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKWDALSRS 382
+AP +AL + K+ + G+ V EL+G+ T+ + +E+ Q+I++TPEKWD ++R
Sbjct: 570 VAPMKALVAEVVGNLSKRL-EHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRK 628
Query: 383 WKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR----MQYISSQGR*QDSSCYFVEFS 550
R + Q V L IVDE+HL+ GPVLE I++R ++ R S +
Sbjct: 629 SGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIIARTIRQIETTKEHIRLVGLSATLPNYE 688
Query: 551 G*CQGFGGMDWGYGSWPFQLSSRCKARAAGNTYSGCR---------------YSKL*G*D 685
F +D G + F S R A Y G Y K+
Sbjct: 689 D-VAVFLRVDLKKGLFHFDNSYRPVPLA--QQYIGITVKKPLQRFQLMNDVCYEKVISIA 745
Query: 686 ASHD-KTHAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFLLQSRTE 862
H HS T K + +T + D L R LLQS+TE
Sbjct: 746 GKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLK-EDSLTRE--------LLQSQTE 796
Query: 863 LEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCWAVPL 1042
L + LK+ L YG H G+ TD+ +++ G +QV V ++T+ W V L
Sbjct: 797 L------VKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 850
Query: 1043 SAHLVVVMGTQQYD 1084
AH V++ GTQ Y+
Sbjct: 851 PAHTVIIKGTQIYN 864
Score = 111 bits (278), Expect(2) = 2e-54
Identities = 98/430 (22%), Positives = 185/430 (43%), Gaps = 10/430 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R D+ G+ +IL +YY + + P+ES L D
Sbjct: 871 TELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQL 930
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHR---HLSDHLSELVENTL 1451
N E+V G + + ++A L T++Y R+ +NP Y L + + L + ++LV +
Sbjct: 931 NAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTDYALEERRADLVHSAA 990
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 991 VLLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1050
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ SR + G +L+SD
Sbjct: 1051 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISRLKLEGLSLSSD 1109
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA+RL++A+ +++ GW LA A++ +M+++ MW + L Q E+
Sbjct: 1110 MVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQTPLRQFHGIPNEIL 1169
Query: 1986 KKCQEKSIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNV 2159
K ++K + +DL E E +M + + +P ++L V
Sbjct: 1170 MKLEKKDLAWERYYDLSSQELGELIRFPKMGR----TLHKFIHQFPKLNLAAHVQP--IT 1223
Query: 2160 RAGDDVSLQVTLEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRK--- 2330
R+ V L +T + + E E +W++V D +L + L+++
Sbjct: 1224 RSVLRVELTITPDFQWE-------DKVHGYVESFWIIVEDNDGEYILHHEYFMLKKQYID 1276
Query: 2331 SRVKLDFTAP 2360
L+FT P
Sbjct: 1277 EDHTLNFTVP 1286
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 681 bits (1757), Expect(4) = 0.0
Identities = 343/440 (77%), Positives = 378/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHLQHYLHDN
Sbjct: 1711 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNL 1770
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+V GVI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE VENTL DL
Sbjct: 1771 NAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDL 1830
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV +EDD+ LSP+ LGMIA ERF EILASASEY
Sbjct: 1831 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYA 1890
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
Q+PIRPGEE+LIRRLINHQRFSFENPK DPH+KANALLQAHFSRQ+V GNLA DQ+EVL
Sbjct: 1891 QIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQREVL 1950
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA RLLQAMVDVISS+GWLNLALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1951 LSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 2010
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQMS+ QL+DIAR C+ +PNID+TYEV+D N+RAGD
Sbjct: 2011 NPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDITYEVLDSENLRAGD 2070
Query: 2172 DVSLQV----TLEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQV LEGRTEVG V APRYPKAKEEGWWLVVGDTKSNQLLAIKRV LQRKS+V
Sbjct: 2071 DITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKV 2130
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F PAEAG ++YTLYFM
Sbjct: 2131 KLEFAVPAEAGRKSYTLYFM 2150
Score = 296 bits (758), Expect(4) = 0.0
Identities = 143/170 (84%), Positives = 159/170 (93%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY++FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+G +
Sbjct: 1344 RNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSE 1403
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
SI+RAVYIAP EALAK +Y DW++KFG LGMRVVELTGET DLKLLE+GQ+IISTPEK
Sbjct: 1404 SIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEK 1463
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQG 511
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQG
Sbjct: 1464 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQG 1513
Score = 177 bits (448), Expect(4) = 0.0
Identities = 86/109 (78%), Positives = 93/109 (85%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1515 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1574
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHA+ KPAIV+VP RKH R+ AVDL TYS D + F
Sbjct: 1575 TKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTF 1623
Score = 135 bits (341), Expect(4) = 0.0
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPFV +I E ML+ TL++GVGYLHEGL+G DQ+++ E GWIQVCVMSS
Sbjct: 1623 FLLRSPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSS 1682
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1683 SLCWGVPLSAHLVVVMGTQYYDGRENAH 1710
Score = 113 bits (282), Expect(4) = 2e-57
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 12/359 (3%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 873 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 932
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+V G +Q+ ++A + T++Y R+ +NP Y G+SH L+ ++ +E DL
Sbjct: 933 NAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLY---GLSHDALTRDIT--LEERRADL 987
Query: 1461 ESSKCVTVEDDLLL---------SPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXE 1613
S + ++ + L+ LG IA +
Sbjct: 988 IHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCR 1047
Query: 1614 ILASASEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG- 1790
+ + + E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G
Sbjct: 1048 LFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGL 1106
Query: 1791 NLASDQQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHF 1970
+L SD + SA RL++A+ +++ GW L A+ + +MV + MW + L Q
Sbjct: 1107 SLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQFNAI 1166
Query: 1971 TKELAKKCQEKSIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEV 2141
E+ K ++K + +DL E E +M + + +P +DL V
Sbjct: 1167 PNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGR----TLHKFIHQFPKLDLAAHV 1221
Score = 94.4 bits (233), Expect(4) = 2e-57
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRN-----HQEGP--DS 184
++ N VQ++V+ + +NVL+ APTG+GK A IL+ + +G S
Sbjct: 506 FKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRNADGSFNHS 565
Query: 185 ILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + ++V EL+G+ ++ + +E+ Q+I++TPEKW
Sbjct: 566 NYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKW 624
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L IVDE+HL+ GPVLE IV+R
Sbjct: 625 DIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIVAR 665
Score = 55.5 bits (132), Expect(4) = 2e-57
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L E + LK+ L YG H G++ D+ +++ G +QV V ++T+ W
Sbjct: 789 SREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAW 848
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 849 GVNLPAHTVIIKGTQIYN 866
Score = 31.2 bits (69), Expect(4) = 2e-57
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RP PL G+ R Q M
Sbjct: 677 IRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMN 736
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 737 DVCYEKVM--AVAGKHQVLIFVHSRKETAKTA 766
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 680 bits (1754), Expect(4) = 0.0
Identities = 343/440 (77%), Positives = 377/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHLQHYLHDN
Sbjct: 1678 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNL 1737
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+V GVI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE VENTL DL
Sbjct: 1738 NAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDL 1797
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV +EDD+ LSP+ LGMIA ERF EILASASEY
Sbjct: 1798 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYA 1857
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
Q+PIRPGEE+LIRRLINHQRFSFENPK DPH+KANALLQAHFSRQ+V GNLA DQ+EVL
Sbjct: 1858 QIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFSRQIVGGNLALDQREVL 1917
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA RLLQAMVDVISS+GWLNLALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1918 LSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 1977
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQMS+ QL+DIAR C+ +PNID TYEV+D N+RAGD
Sbjct: 1978 NPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDXTYEVLDSENLRAGD 2037
Query: 2172 DVSLQV----TLEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQV LEGRTEVG V APRYPKAKEEGWWLVVGDTKSNQLLAIKRV LQRKS+V
Sbjct: 2038 DITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKV 2097
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F PAEAG ++YTLYFM
Sbjct: 2098 KLEFAVPAEAGRKSYTLYFM 2117
Score = 296 bits (758), Expect(4) = 0.0
Identities = 143/170 (84%), Positives = 159/170 (93%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY++FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+G +
Sbjct: 1311 RNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSE 1370
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
SI+RAVYIAP EALAK +Y DW++KFG LGMRVVELTGET DLKLLE+GQ+IISTPEK
Sbjct: 1371 SIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEK 1430
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQG 511
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQG
Sbjct: 1431 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQG 1480
Score = 177 bits (448), Expect(4) = 0.0
Identities = 86/109 (78%), Positives = 93/109 (85%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1482 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1541
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHA+ KPAIV+VP RKH R+ AVDL TYS D + F
Sbjct: 1542 TKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTF 1590
Score = 135 bits (341), Expect(4) = 0.0
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPFV +I E ML+ TL++GVGYLHEGL+G DQ+++ E GWIQVCVMSS
Sbjct: 1590 FLLRSPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSS 1649
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1650 SLCWGVPLSAHLVVVMGTQYYDGRENAH 1677
Score = 113 bits (282), Expect(4) = 2e-57
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 12/359 (3%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 840 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 899
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+V G +Q+ ++A + T++Y R+ +NP Y G+SH L+ ++ +E DL
Sbjct: 900 NAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLY---GLSHDALTRDIT--LEERRADL 954
Query: 1461 ESSKCVTVEDDLLL---------SPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXE 1613
S + ++ + L+ LG IA +
Sbjct: 955 IHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCR 1014
Query: 1614 ILASASEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG- 1790
+ + + E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G
Sbjct: 1015 LFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGL 1073
Query: 1791 NLASDQQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHF 1970
+L SD + SA RL++A+ +++ GW L A+ + +MV + MW + L Q
Sbjct: 1074 SLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSVQTPLRQFNAI 1133
Query: 1971 TKELAKKCQEKSIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEV 2141
E+ K ++K + +DL E E +M + + +P +DL V
Sbjct: 1134 PNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGR----TLHKFIHQFPKLDLAAHV 1188
Score = 94.4 bits (233), Expect(4) = 2e-57
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRN-----HQEGP--DS 184
++ N VQ++V+ + +NVL+ APTG+GK A IL+ + +G S
Sbjct: 473 FKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRNADGSFNHS 532
Query: 185 ILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + ++V EL+G+ ++ + +E+ Q+I++TPEKW
Sbjct: 533 NYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKW 591
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L IVDE+HL+ GPVLE IV+R
Sbjct: 592 DIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIVAR 632
Score = 55.5 bits (132), Expect(4) = 2e-57
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L E + LK+ L YG H G++ D+ +++ G +QV V ++T+ W
Sbjct: 756 SREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAW 815
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 816 GVNLPAHTVIIKGTQIYN 833
Score = 31.2 bits (69), Expect(4) = 2e-57
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RP PL G+ R Q M
Sbjct: 644 IRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMN 703
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 704 DVCYEKVM--AVAGKHQVLIFVHSRKETAKTA 733
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 678 bits (1749), Expect(4) = 0.0
Identities = 341/440 (77%), Positives = 379/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDNF
Sbjct: 1344 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1403
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVVAGVI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1404 NAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 1463
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV +E+D+ LSP+ LGMIA ERF EILASASEY
Sbjct: 1464 EASKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTRMKGLLEILASASEYA 1523
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++RRLINHQRFSFENP+Y DPHVKAN LLQAHFSR V GNLA DQ+EVL
Sbjct: 1524 QLPIRPGEEEVLRRLINHQRFSFENPRYSDPHVKANVLLQAHFSRHSVGGNLALDQREVL 1583
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LS+SRLLQAMVDVISS+GWL+LALLAME+SQMVTQGMWERDS+LLQLPHFTKELAKKCQE
Sbjct: 1584 LSSSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQE 1643
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQMS +L+D+ R C+ +PNID++YEVMDG +VR GD
Sbjct: 1644 NPGKSIETVFDLVEMEDDERRELLQMSNSELLDVVRFCNRFPNIDMSYEVMDGEDVRMGD 1703
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQVT LEGRTEVGPV A RYPKAKEEGWWLVVGDTKSNQLLAIKRV+LQRKS+V
Sbjct: 1704 DITLQVTLERDLEGRTEVGPVDAARYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKV 1763
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F AP+E G ++YTLYFM
Sbjct: 1764 KLEFAAPSETGRKSYTLYFM 1783
Score = 295 bits (755), Expect(4) = 0.0
Identities = 142/169 (84%), Positives = 157/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 977 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1036
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S+ RAVYIAP EA+AK +Y DW++KFG LGMRVVELTGET DLKLLEK Q+IISTPEK
Sbjct: 1037 SVTRAVYIAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATDLKLLEKSQIIISTPEK 1096
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFI+DELHLIGGQGGP+LEVIVSRM+YI+SQ
Sbjct: 1097 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIASQ 1145
Score = 184 bits (467), Expect(4) = 0.0
Identities = 89/109 (81%), Positives = 97/109 (88%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS+SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1148 NKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1207
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHA+ GKPAIV+VP RKH R+ AVDLMTYS DS + F
Sbjct: 1208 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDLMTYSSADSGEKPAF 1256
Score = 131 bits (330), Expect(4) = 0.0
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
F+++S ELEPFV R+ + ML+ TL+ GVGYLHEGLS DQ+++ E GWIQVCVMSS
Sbjct: 1256 FMMRSIEELEPFVGRVQDEMLRSTLRQGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSS 1315
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
+MCW VPL+AHLVVVMGTQ YDGREN H
Sbjct: 1316 SMCWGVPLAAHLVVVMGTQYYDGRENAH 1343
Score = 111 bits (278), Expect(4) = 2e-59
Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 7/323 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 506 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSKLADQL 565
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A + L T++Y R+ +NP Y L V R L + ++L+ ++
Sbjct: 566 NAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADLIHSSA 625
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 626 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 685
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 686 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 744
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW L A+ + +M+ + MW + L Q E+
Sbjct: 745 MVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKMINKRMWSVQTPLRQFNGIPNEIL 804
Query: 1986 KKCQEKSIV--TVFDLVEMEDDE 2048
K ++K + +DL E E
Sbjct: 805 MKLEKKDLAWERYYDLSSQEIGE 827
Score = 100 bits (250), Expect(4) = 2e-59
Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILR------NHQEGP--D 181
++ + N VQ++V+ DNVL+ APTG+GK A IL+ N ++G
Sbjct: 138 FKGMQQLNRVQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMNKEDGSFNH 197
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S + VY+AP +AL + + + G++V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 198 SDYKIVYVAPMKALVAEVVGNLSNRLQE-YGVKVRELSGDQSLTRQQIEETQIIVTTPEK 256
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 257 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 298
Score = 55.5 bits (132), Expect(4) = 2e-59
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L+ + + LK+ L YG H G++ D+ +++ G +QV V ++T+ W
Sbjct: 422 SREILQSHTDMVKSNDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAW 481
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 482 GVNLPAHTVIIKGTQIYN 499
Score = 33.1 bits (74), Expect(4) = 2e-59
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RPVPL G+ R Q M
Sbjct: 310 IRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMN 369
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 370 DICYEKVM--AVAGKHQVLIFVHSRKETAKTA 399
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 675 bits (1741), Expect(4) = 0.0
Identities = 338/440 (76%), Positives = 378/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVI CHAPRK+YYKKFLYEAFPVESHL H+LHDNF
Sbjct: 1688 TDYPVTDLLQMMGHASRPLLDNSGKCVIFCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1747
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVVAGVI++KQDAVD LT TF YRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1748 NAEVVAGVIENKQDAVDYLTWTFTYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1807
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E SKCV +E+D+ LSP+ LGMIA ERF EIL+SASEY
Sbjct: 1808 ERSKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYA 1867
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++RRLINHQRFSFENP+Y DPHVKAN LLQAHFSRQ V GNLA DQ+EVL
Sbjct: 1868 QLPIRPGEEEVLRRLINHQRFSFENPRYADPHVKANVLLQAHFSRQSVGGNLALDQREVL 1927
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LS SRLLQAMVDVISS+GWL+LALLAME+SQMVTQGMWERDS+LLQLPHFTK++AK+CQE
Sbjct: 1928 LSGSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDMAKRCQE 1987
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQMS+ QL+DI R C+ +PNID++YEVMDG NVRAG+
Sbjct: 1988 NPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGDNVRAGE 2047
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++L VT LEGRTEVGPV +PRYPKAKEEGWWLVVGDTKSNQLLAIKRV+LQRKS+V
Sbjct: 2048 DITLLVTLERDLEGRTEVGPVDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKV 2107
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+ G ++YTLYFM
Sbjct: 2108 KLEFAAPADTGRKSYTLYFM 2127
Score = 296 bits (758), Expect(4) = 0.0
Identities = 142/169 (84%), Positives = 159/169 (94%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+GP+
Sbjct: 1321 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPE 1380
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++RAVYIAP EA+A+ +Y DW++KFG LGMRVVELTGET DLKLLEKGQ+IISTPEK
Sbjct: 1381 SVMRAVYIAPLEAIARERYRDWERKFGRGLGMRVVELTGETATDLKLLEKGQIIISTPEK 1440
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1441 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQ 1489
Score = 182 bits (462), Expect(4) = 0.0
Identities = 87/102 (85%), Positives = 95/102 (93%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS+SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1492 NKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1551
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMD 821
TKPT+T+IVQHA+ GKPAIV+VP RKH R+ AVDLMTYS MD
Sbjct: 1552 TKPTYTSIVQHAKNGKPAIVFVPTRKHVRLAAVDLMTYSSMD 1593
Score = 132 bits (331), Expect(4) = 0.0
Identities = 60/88 (68%), Positives = 71/88 (80%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPF+ +I E ML+ TL +G+GYLHEGLS DQ+++ E GWIQVCVMSS
Sbjct: 1600 FLLRSIEELEPFIGKIQEEMLRATLHHGIGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSS 1659
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
+MCW VPLSAHLVVVMGTQ YDG+EN H
Sbjct: 1660 SMCWGVPLSAHLVVVMGTQYYDGQENAH 1687
Score = 111 bits (277), Expect(2) = 1e-42
Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 5/308 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 846 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQL 905
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A L T++Y R+ +NP Y L V R L + ++L+ +
Sbjct: 906 NAEIVLGTVQNAREACHWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADLIHSAA 965
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 966 AILDKNNLVKYDRKSGYFQGTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1025
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1026 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1084
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RL++A+ +++ GW LA A+ + +MV + MW + L Q E+
Sbjct: 1085 MVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFHGIPNEIL 1144
Query: 1986 KKCQEKSI 2009
K ++K +
Sbjct: 1145 MKLEKKDL 1152
Score = 92.0 bits (227), Expect(2) = 1e-42
Identities = 100/378 (26%), Positives = 149/378 (39%), Gaps = 25/378 (6%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNH--QEGPDSIL--- 190
++ + N VQ++V+ DNVL+ APTG+GK A IL+ PD
Sbjct: 506 FKGMQQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALNRNPDGSFNNN 565
Query: 191 --RAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL V E+ G + +L E G +W
Sbjct: 566 NYKIVYVAPMKAL-------------------VAEVVGN--LSNRLQEYGV-------QW 597
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR----MQYISSQGR*QDSSC 532
D ++R R + Q V L I+DE+HL+ GPVLE IV+R ++ R S
Sbjct: 598 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSA 657
Query: 533 YFVEFSG*CQGFGGMDWGYGSWPFQLSSR-------------CKARAAGNTYSGCRYSKL 673
F F +D G + F S R K + Y K+
Sbjct: 658 TLPNFED-VALFLRVDLDKGLFHFDNSYRPVPLSQQYIGINIKKPLQRFQLMNDICYEKV 716
Query: 674 *G*DASHD-KTHAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFLLQ 850
H HS T K + +T +R D R +LQ
Sbjct: 717 MDVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSRFLR-EDSASRE--------ILQ 767
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
+ TEL + LK+ L YG H G++ D+ +++ G +QV V ++T+ W
Sbjct: 768 THTEL------VKSNDLKDLLPYGFAVHHAGMTRGDRQLVEDLFADGHVQVLVSTATLAW 821
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 822 GVNLPAHTVIIKGTQIYN 839
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 672 bits (1733), Expect(4) = 0.0
Identities = 335/440 (76%), Positives = 379/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLY+AFPVESHL H+LHDNF
Sbjct: 1717 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVESHLHHFLHDNF 1776
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAGVI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT+ DL
Sbjct: 1777 NAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTISDL 1836
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+ +E+D+ LSP GMIA ERF E+LASASEY
Sbjct: 1837 EASKCIIIEEDMDLSPSNHGMIASYYYISYTTIERFSSSLTPKTRMKGLLEVLASASEYA 1896
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++RRLI+HQRFSFENPK+ DPHVKANALLQAHFSRQ V GNL DQ+EVL
Sbjct: 1897 QLPIRPGEEEVVRRLIHHQRFSFENPKFTDPHVKANALLQAHFSRQQVGGNLKLDQEEVL 1956
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSASRLLQAMVDVISS+GWL+LALLAME+SQMVTQG+WERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1957 LSASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGIWERDSMLLQLPHFTKDLAKRCQE 2016
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQMS+ QL+DIAR C+ +PNID+++EV D NVRAG+
Sbjct: 2017 NPGKSIETVFDLVEMEDDERRELLQMSDVQLLDIARFCNRFPNIDMSFEVQDSENVRAGE 2076
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQV LEGRTEVGPV++ RYPKAKEEGWWLVVGDTK+NQLLAIKRV+LQRKSRV
Sbjct: 2077 DITLQVVLERDLEGRTEVGPVYSNRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKSRV 2136
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDF APAEAG + YTLYFM
Sbjct: 2137 KLDFAAPAEAGKKTYTLYFM 2156
Score = 281 bits (720), Expect(4) = 0.0
Identities = 138/170 (81%), Positives = 155/170 (91%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN YEALY+ FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGK IC+EFAILRNHQ+ +
Sbjct: 1349 RNPLYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICSEFAILRNHQKASE 1408
Query: 182 S-ILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPE 358
+ ++RAVYIAP EALAK +Y DW+ KFG LGMRVVELTGET +DLKLLEKGQ+IISTPE
Sbjct: 1409 TGVMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPE 1468
Query: 359 KWDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
KWDALSR WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1469 KWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQ 1518
Score = 177 bits (449), Expect(4) = 0.0
Identities = 85/109 (77%), Positives = 93/109 (85%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD NFEARMQAM
Sbjct: 1521 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAM 1580
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT TAIVQHA+ KPA+V+VP RK+ R+ AVDLMTYS MD + F
Sbjct: 1581 TKPTFTAIVQHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAF 1629
Score = 125 bits (313), Expect(4) = 0.0
Identities = 57/90 (63%), Positives = 71/90 (78%)
Frame = +2
Query: 833 TVFLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVM 1012
+ FLL E+EPF++ I E MLK TL++GVGYLHEGL+ TDQ+++ E G I+VCVM
Sbjct: 1627 SAFLLWPAEEVEPFIDNIQEEMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVM 1686
Query: 1013 SSTMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
SS+MCW VPL+AHLVVVMGTQ YDG+EN H
Sbjct: 1687 SSSMCWGVPLTAHLVVVMGTQYYDGQENAH 1716
Score = 119 bits (299), Expect(2) = 7e-52
Identities = 103/379 (27%), Positives = 167/379 (44%), Gaps = 26/379 (6%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRN-----HQEGP--DS 184
++ N VQ++V+ +S DN+L+ APTG+GK A IL+ + +G S
Sbjct: 511 FKGMTQLNRVQSRVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHS 570
Query: 185 ILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + ++V EL+G+ T+ + +E+ Q+I++TPEKW
Sbjct: 571 NYKIVYVAPMKALVAEVVGNLSNRL-QMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKW 629
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVI----VSRMQYISSQGR*QDSSC 532
D ++R R + Q V L I+DE+HL+ GPVLE I V +++ R S
Sbjct: 630 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSA 689
Query: 533 YFVEFSG*C--------QGFGGMDWGYGSWPFQLSSRC------KARAAGNTYSGCRYSK 670
+ +G D Y P LS + K + Y K
Sbjct: 690 TLPNYEDVALFLRVNLEKGLFYFDNSYR--PVPLSQQYIGIQVKKPLQRFQLMNDLCYEK 747
Query: 671 L*G*DASHDKT-HAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFLL 847
+ H HS T K + + +T R D + R +L
Sbjct: 748 VVAVAGKHQVLIFVHSRKETAKTARAIRDTALENDTLGRFLK-EDSVSRE--------IL 798
Query: 848 QSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMC 1027
QS T++ + LK+ L YG H G++ D+ +++ G +QV V ++T+
Sbjct: 799 QSHTDM------VKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLA 852
Query: 1028 WAVPLSAHLVVVMGTQQYD 1084
W V L AH V++ GTQ Y+
Sbjct: 853 WGVNLPAHTVIIKGTQIYN 871
Score = 114 bits (285), Expect(2) = 7e-52
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 5/306 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 878 TELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQL 937
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRH---LSDHLSELVENTL 1451
N E+V G +Q+ ++A + + T++Y R+ +NP Y L + L + ++LV
Sbjct: 938 NAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAA 997
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 998 TILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRLFSLS 1057
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1058 EEFKYVTVRQDEKMELAKLLDRVPIPVKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1116
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ +S+MVT+ MW + L Q E+
Sbjct: 1117 MVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLSKMVTKRMWSVQTPLRQFNGIPNEIL 1176
Query: 1986 KKCQEK 2003
K ++K
Sbjct: 1177 MKLEKK 1182
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 667 bits (1722), Expect(4) = 0.0
Identities = 330/440 (75%), Positives = 378/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVD+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1760 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1819
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTL DL
Sbjct: 1820 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1879
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV++EDD+ LSP+ LGMIA ERF E+L+SASEY
Sbjct: 1880 EASKCVSIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYA 1939
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
LPIRPGEEE++RRLINHQRFSFENPK DPHVKANALLQAHFSRQ V GNL+ DQ+EVL
Sbjct: 1940 HLPIRPGEEEVVRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQREVL 1999
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL++ALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAKKCQE
Sbjct: 2000 LSANRLLQAMVDVISSNGWLSMALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQE 2059
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
+SI TVFDL+EMEDDER ELL M++ QL+DIAR C+ +PNIDL+YE++D NVRAGD
Sbjct: 2060 NPGRSIETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGD 2119
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQVT LEG+TEVGPV APRYPKAKEEGWWLVVGDTK+N LLAIKRV+LQRK +
Sbjct: 2120 DITLQVTLERDLEGKTEVGPVDAPRYPKAKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKA 2179
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+AG ++Y LYFM
Sbjct: 2180 KLEFAAPADAGKKSYVLYFM 2199
Score = 295 bits (754), Expect(4) = 0.0
Identities = 144/169 (85%), Positives = 156/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+ PD
Sbjct: 1394 RNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKLPD 1453
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VYIAP EALAK +Y DW+KKFG L ++VVELTGET DLKLLEKGQ+IISTPEK
Sbjct: 1454 SVMRVVYIAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEK 1513
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YISSQ
Sbjct: 1514 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYISSQ 1562
Score = 175 bits (444), Expect(4) = 0.0
Identities = 84/103 (81%), Positives = 92/103 (89%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1565 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1624
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDS 824
TKPT+T+I QHA+ KPAIV+VP RKH R+ AVDL+TYS DS
Sbjct: 1625 TKPTYTSIAQHAKNKKPAIVFVPTRKHVRLTAVDLITYSGADS 1667
Score = 125 bits (315), Expect(4) = 0.0
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPF+ +I++ MLK TL+ GVGYLHEGL+ D DI+ E GWIQVCV+SS
Sbjct: 1672 FLLRSLEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSS 1731
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
+MCW V LSAHLVVVMGTQ YDGREN
Sbjct: 1732 SMCWGVTLSAHLVVVMGTQYYDGREN 1757
Score = 98.2 bits (243), Expect(4) = 8e-54
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAIL------RNHQEGP--D 181
++ N VQ++V+ DN+L+ APTG+GK A IL RN +G
Sbjct: 518 FKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNTDDGSIDH 577
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S + VY+AP +AL + + D + V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 578 SAYKIVYVAPMKALVAEVVGNLSNRLQD-YNVTVRELSGDQSLTRQQIEETQIIVTTPEK 636
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 637 WDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESIVAR 678
Score = 95.1 bits (235), Expect(4) = 8e-54
Identities = 105/468 (22%), Positives = 187/468 (39%), Gaps = 48/468 (10%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +IL +YY + + P+ES L D
Sbjct: 886 TELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQL 945
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRHL------SDHLSELV 1439
N E+V G +Q+ ++A + T++Y R+ +NP+ Y L V R + +D EL+
Sbjct: 946 NAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGLAPDVLSRDITLEERRADLFIELL 1005
Query: 1440 ENTLGDL----ESSKCVTVEDDLL--------LSPVKLGMIAXXXXXXXXXXERFXXXXX 1583
E L ++ + ++L+ LG IA +
Sbjct: 1006 EKGTKSLWTIIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLK 1065
Query: 1584 XXXXXXXXXEILASASEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQA 1763
+ + + E++ + +R E+ + +L++ + +P K N LLQA
Sbjct: 1066 PTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQA 1124
Query: 1764 HFSRQMVRG-NLASDQ----------------------QEVLLSASRLLQAMVDVISSDG 1874
+ S+ + G ++ SD + SA RLL+A+ +++ G
Sbjct: 1125 YISQLKLEGLSMTSDMVFITQFIRSGVPLILLFADSCIMFLFQSAGRLLRALFEIVLKRG 1184
Query: 1875 WLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQEKSIV--TVFDLVEMEDDE 2048
W LA A+ + +MVT+ MW + L Q ++ K ++K + +DL E E
Sbjct: 1185 WAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSSQEIGE 1244
Query: 2049 RHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGDDVSLQVTLEGRTEVGPVFA 2228
+M + R +P ++L V G V L +T P FA
Sbjct: 1245 LIRAPKMGR----TLHRFIHQFPKLNLAAHVQPITRTVLG--VELTIT--------PDFA 1290
Query: 2229 -PRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQR---KSRVKLDFTAP 2360
E +W++V D +L + L++ + L+FT P
Sbjct: 1291 WDDRMHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVP 1338
Score = 55.8 bits (133), Expect(4) = 8e-54
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + + LK+ L YG H G++ TD+ +++ G QV V ++T+ W
Sbjct: 802 SREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAW 861
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 862 GVNLPAHTVIIKGTQIYN 879
Score = 32.7 bits (73), Expect(4) = 8e-54
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ + GLF F RPVPL G+ R Q M
Sbjct: 690 IRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPLQRFQLMN 749
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 750 DICYRKVLDVA--GKHQVLIFVHSRKETAKTA 779
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 667 bits (1721), Expect(4) = 0.0
Identities = 334/440 (75%), Positives = 380/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DL+QM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1709 TDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNI 1768
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD +T T MYRRLTQNPNYYNLQGVSHRHLSDHLSELVE+TL DL
Sbjct: 1769 NAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDL 1828
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+++EDD+ LSP LGMIA ERF EILASASEY
Sbjct: 1829 EASKCISIEDDMDLSPSNLGMIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEYA 1888
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
LPIRPGEEELIRRLINHQRFSFENPK DPHVKANALLQA+FSRQ V GNLA DQ+EV+
Sbjct: 1889 LLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVGGNLALDQREVV 1948
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
+SASRLLQAMVDVISS+GWL+LALLAME+SQMVTQG+WERDS+LLQLPHFTKELAK+CQE
Sbjct: 1949 ISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQE 2008
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
K+I T+FDLVEMED+ERHELLQMS+ QL+DIAR C+ +PNID+ YEV+DG NV AG+
Sbjct: 2009 NSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNIDMAYEVLDGENVAAGE 2068
Query: 2172 DVSLQVTLE----GRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQVTLE GRTEVGPV A RYPKAKEEGWWLVVGDTKSNQLLAIKRV+LQRK++V
Sbjct: 2069 NVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKAKV 2128
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDFTAPA+ G ++YTLYFM
Sbjct: 2129 KLDFTAPADTGKKSYTLYFM 2148
Score = 291 bits (744), Expect(4) = 0.0
Identities = 141/169 (83%), Positives = 157/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRN+Q+G D
Sbjct: 1342 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNYQKGQD 1401
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
++LRAVYIAP E+LAK +Y DW KKFG LG+RVVELTGET DLKLLE+GQ+IISTPEK
Sbjct: 1402 NVLRAVYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEK 1461
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1462 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQ 1510
Score = 181 bits (460), Expect(4) = 0.0
Identities = 86/109 (78%), Positives = 97/109 (88%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKD+G+WIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1513 NKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHA+ GKPAIV+VP RKH R+ AVD+MTYS D+ + L F
Sbjct: 1573 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPF 1621
Score = 133 bits (335), Expect(4) = 0.0
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ++EPFV++IN+ MLK L++GVGYLHEGLS DQ+++ E GWIQVCV+SS
Sbjct: 1621 FLLRSLEDIEPFVDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISS 1680
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
+MCW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1681 SMCWGVPLSAHLVVVMGTQYYDGRENAH 1708
Score = 112 bits (280), Expect(4) = 2e-58
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 7/320 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G +I+ +YY + + P+ES L D
Sbjct: 871 TELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 930
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRH---LSDHLSELVENTL 1451
N E+V G +Q+ ++A + L T++Y R+ +NP Y L + L + ++L+ +
Sbjct: 931 NAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRDITLEERRADLIHSAA 990
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 991 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFSLS 1050
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L+ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1051 EEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1109
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RL++A+ +++ GW LA A+ + +MV++ MW + L Q + ++
Sbjct: 1110 MVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHGISNDIL 1169
Query: 1986 KKCQEKSIV--TVFDLVEME 2039
K ++K + +DL E
Sbjct: 1170 MKLEKKDLAWERYYDLSSQE 1189
Score = 99.8 bits (247), Expect(4) = 2e-58
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNH--QEGPDSIL--- 190
++ N VQ++V+ DNVL+ APTG+GK A IL+ PD
Sbjct: 504 FKGMTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPDGSYNHN 563
Query: 191 --RAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + D G++V EL+G+ T+ + +++ Q+I++TPEKW
Sbjct: 564 DYKIVYVAPMKALVAEVVGNLSNRLQD-YGVKVRELSGDQTLTRQQIDETQIIVTTPEKW 622
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 623 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 663
Score = 55.1 bits (131), Expect(4) = 2e-58
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + LK+ L YG H G++ D+ +++ G IQV V ++T+ W
Sbjct: 787 SREILHTHTDLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAW 846
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 847 GVNLPAHCVIIKGTQIYN 864
Score = 30.4 bits (67), Expect(4) = 2e-58
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RPV L G+ R Q M
Sbjct: 675 IRLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMN 734
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 735 DLCYEKVMSFA--GKHQVLIFVHSRKETSKTA 764
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 667 bits (1721), Expect(4) = 0.0
Identities = 334/440 (75%), Positives = 380/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DL+QM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1709 TDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNI 1768
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD +T T MYRRLTQNPNYYNLQGVSHRHLSDHLSELVE+TL DL
Sbjct: 1769 NAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDL 1828
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+++EDD+ LSP LGMIA ERF EILASASEY
Sbjct: 1829 EASKCISIEDDMDLSPSNLGMIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEYA 1888
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
LPIRPGEEELIRRLINHQRFSFENPK DPHVKANALLQA+FSRQ V GNLA DQ+EV+
Sbjct: 1889 LLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFSRQSVGGNLALDQREVV 1948
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
+SASRLLQAMVDVISS+GWL+LALLAME+SQMVTQG+WERDS+LLQLPHFTKELAK+CQE
Sbjct: 1949 ISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQE 2008
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
K+I T+FDLVEMED+ERHELLQMS+ QL+DIAR C+ +PNID+ YEV+DG NV AG+
Sbjct: 2009 NSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNIDMAYEVLDGENVAAGE 2068
Query: 2172 DVSLQVTLE----GRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQVTLE GRTEVGPV A RYPKAKEEGWWLVVGDTKSNQLLAIKRV+LQRK++V
Sbjct: 2069 NVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKAKV 2128
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDFTAPA+ G ++YTLYFM
Sbjct: 2129 KLDFTAPADTGKKSYTLYFM 2148
Score = 291 bits (744), Expect(4) = 0.0
Identities = 141/169 (83%), Positives = 157/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRN+Q+G D
Sbjct: 1342 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNYQKGQD 1401
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
++LRAVYIAP E+LAK +Y DW KKFG LG+RVVELTGET DLKLLE+GQ+IISTPEK
Sbjct: 1402 NVLRAVYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEK 1461
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1462 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQ 1510
Score = 181 bits (460), Expect(4) = 0.0
Identities = 86/109 (78%), Positives = 97/109 (88%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKD+G+WIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1513 NKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
TKPT+TAIVQHA+ GKPAIV+VP RKH R+ AVD+MTYS D+ + L F
Sbjct: 1573 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPF 1621
Score = 133 bits (335), Expect(4) = 0.0
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ++EPFV++IN+ MLK L++GVGYLHEGLS DQ+++ E GWIQVCV+SS
Sbjct: 1621 FLLRSLEDIEPFVDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISS 1680
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
+MCW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1681 SMCWGVPLSAHLVVVMGTQYYDGRENAH 1708
Score = 112 bits (280), Expect(4) = 2e-58
Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 7/320 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G +I+ +YY + + P+ES L D
Sbjct: 871 TELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 930
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRH---LSDHLSELVENTL 1451
N E+V G +Q+ ++A + L T++Y R+ +NP Y L + L + ++L+ +
Sbjct: 931 NAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRDITLEERRADLIHSAA 990
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 991 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPMMGDIELCRLFSLS 1050
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L+ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1051 EEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1109
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RL++A+ +++ GW LA A+ + +MV++ MW + L Q + ++
Sbjct: 1110 MVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSVQTPLRQFHGISNDIL 1169
Query: 1986 KKCQEKSIV--TVFDLVEME 2039
K ++K + +DL E
Sbjct: 1170 MKLEKKDLAWERYYDLSSQE 1189
Score = 99.8 bits (247), Expect(4) = 2e-58
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNH--QEGPDSIL--- 190
++ N VQ++V+ DNVL+ APTG+GK A IL+ PD
Sbjct: 504 FKGMTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPDGSYNHN 563
Query: 191 --RAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + D G++V EL+G+ T+ + +++ Q+I++TPEKW
Sbjct: 564 DYKIVYVAPMKALVAEVVGNLSNRLQD-YGVKVRELSGDQTLTRQQIDETQIIVTTPEKW 622
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 623 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 663
Score = 55.1 bits (131), Expect(4) = 2e-58
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + LK+ L YG H G++ D+ +++ G IQV V ++T+ W
Sbjct: 787 SREILHTHTDLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAW 846
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 847 GVNLPAHCVIIKGTQIYN 864
Score = 30.4 bits (67), Expect(4) = 2e-58
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RPV L G+ R Q M
Sbjct: 675 IRLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMN 734
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 735 DLCYEKVMSFA--GKHQVLIFVHSRKETSKTA 764
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 665 bits (1716), Expect(4) = 0.0
Identities = 329/440 (74%), Positives = 375/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVD+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1719 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1778
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTL DL
Sbjct: 1779 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1838
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV +EDD+ LSP+ LGMIA ERF E+L+SASEY
Sbjct: 1839 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYA 1898
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
LPIRPGE+EL+RRLINHQRFSFENPK DPHVKANALLQAHFSRQ V GNLA DQ+EVL
Sbjct: 1899 HLPIRPGEDELVRRLINHQRFSFENPKVTDPHVKANALLQAHFSRQFVGGNLALDQREVL 1958
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL +ALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAKKCQE
Sbjct: 1959 LSANRLLQAMVDVISSNGWLTMALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQE 2018
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
+SI TVFDL+EMEDDER ELL M++ QL+DIAR C+ +PNIDL+YE++D NVRAG+
Sbjct: 2019 NPGRSIETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGE 2078
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++LQVT LEG+TEVGPV APRYPK KEEGWWLVVGDTK+N LLAIKRV+LQRK +
Sbjct: 2079 DITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKA 2138
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+AG ++Y LYFM
Sbjct: 2139 KLEFAAPADAGKKSYVLYFM 2158
Score = 298 bits (762), Expect(4) = 0.0
Identities = 144/169 (85%), Positives = 157/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY++FKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1353 RNPSYEALYQEFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1412
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VYIAP EALAK +Y DWKKKFG L +RVVELTGET D+KLLEKGQ+IISTPEK
Sbjct: 1413 SVMRVVYIAPIEALAKERYRDWKKKFGGGLELRVVELTGETATDVKLLEKGQIIISTPEK 1472
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1473 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQ 1521
Score = 176 bits (445), Expect(4) = 0.0
Identities = 83/105 (79%), Positives = 93/105 (88%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1524 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1583
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSED 830
TKPT+TAI QHA+ KPA+V+VP RKH R+ AVD++TYS DS +
Sbjct: 1584 TKPTYTAIAQHAKNRKPALVFVPTRKHVRLTAVDMITYSGADSSE 1628
Score = 122 bits (307), Expect(4) = 0.0
Identities = 57/86 (66%), Positives = 67/86 (77%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+ ELEPF+ ++++ MLK TL+ GVGYLHEGL D DI+ E GWIQVCV+SS
Sbjct: 1631 FLLRPIEELEPFINKVSDEMLKVTLREGVGYLHEGLDNLDHDIVAQLFEAGWIQVCVLSS 1690
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
+MCW V LSAHLVVVMGTQ YDGREN
Sbjct: 1691 SMCWGVTLSAHLVVVMGTQYYDGREN 1716
Score = 122 bits (306), Expect(2) = 3e-51
Identities = 106/383 (27%), Positives = 171/383 (44%), Gaps = 30/383 (7%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAIL------RNHQEGP--D 181
++ N VQ++V+ DN+L+ APTG+GK A IL RN +G
Sbjct: 514 FKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPNDGSIDH 573
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
+ + VY+AP +AL + + + ++V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 574 TAYKIVYVAPMKALVAEVVGNLSNRL-EKYDVKVRELSGDQSLTRQQIEETQIIVTTPEK 632
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR--------MQYISSQG-- 511
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R YI G
Sbjct: 633 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVGLS 692
Query: 512 ----R*QDSSCYF-VEFSG*CQGFGGMDWGYGSWPFQLSSRC------KARAAGNTYSGC 658
+D + + V+ + +G D Y P LS + K +
Sbjct: 693 ATLPNYEDVALFLRVDLN---KGLFYFDNSYR--PVPLSQQYVGITVKKPLQRFQLMNDI 747
Query: 659 RYSKL*G*DASHD-KTHAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHT 835
Y K+ H HS T K + +T +R D R
Sbjct: 748 CYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLSRFLK-EDSASRE------ 800
Query: 836 VFLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMS 1015
+L + T+L + + LK+ L YG H G++ TD+ +++ G QV V +
Sbjct: 801 --ILHTHTDL------VKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVST 852
Query: 1016 STMCWAVPLSAHLVVVMGTQQYD 1084
+T+ W V L AH V++ GTQ Y+
Sbjct: 853 ATLAWGVNLPAHTVIIKGTQIYN 875
Score = 109 bits (273), Expect(2) = 3e-51
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 7/323 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 882 TELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFISKLADQL 941
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSELVENTL 1451
N E+V G +Q+ ++A + T++Y R+ +NP+ Y + L + ++L+
Sbjct: 942 NAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGIAPDVLTKDITLEERRADLIHTAA 1001
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 1002 TILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1061
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G ++ SD
Sbjct: 1062 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSMTSD 1120
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MVT+ MW + L Q ++
Sbjct: 1121 MVFITQSAGRLLRALFEIVVKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPNDIL 1180
Query: 1986 KKCQEKSIV--TVFDLVEMEDDE 2048
K ++K + +DL E E
Sbjct: 1181 TKLEKKDLAWERYYDLSSQEIGE 1203
>gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 664 bits (1714), Expect(4) = 0.0
Identities = 333/440 (75%), Positives = 381/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDNF
Sbjct: 1593 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1652
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VA VI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1653 NAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1712
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+T+EDD+ LSP+ LGMIA ERF EILASASEY
Sbjct: 1713 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYA 1772
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEE+++RRLINHQRFSFENP+ DPHVKANALLQAHF+RQ V GNLA DQ+EVL
Sbjct: 1773 QLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFTRQHVGGNLALDQREVL 1832
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
L A+RLLQAMVDVISS+GWL+LALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1833 LYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 1892
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
K+I T+FDLVEMEDDER ELLQMS+ QL+DIA+ C+ +PNIDL+Y+V++G NVRAG+
Sbjct: 1893 NPGKNIETIFDLVEMEDDERRELLQMSDLQLLDIAKFCNRFPNIDLSYDVLEGENVRAGE 1952
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQVT LEGRTEVGPV APRYPKAKEEGWWLVVG+T+SNQLLAIKRV+LQRK++V
Sbjct: 1953 NVTLQVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLVVGETRSNQLLAIKRVSLQRKAKV 2012
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F AP EA + YTLYFM
Sbjct: 2013 KLEFAAPTEAAKKAYTLYFM 2032
Score = 299 bits (765), Expect(4) = 0.0
Identities = 144/169 (85%), Positives = 160/169 (94%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1227 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1286
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
SI+R VYIAP EA+AK +Y DW+KKFG LGMRVVELTGET++DLKLLEKGQ++ISTPEK
Sbjct: 1287 SIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEK 1346
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVS+FIVDELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1347 WDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQ 1395
Score = 183 bits (464), Expect(4) = 0.0
Identities = 86/105 (81%), Positives = 97/105 (92%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1398 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1457
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSED 830
TKPT+TA+VQHA+ GKPAIV+VP RKH R+ AVDLM+YS +D+E+
Sbjct: 1458 TKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTAVDLMSYSKVDNEE 1502
Score = 129 bits (324), Expect(4) = 0.0
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
F L+S EL+PFV++I+E L+ TL++GVGYLHEGL+ DQ+++ E GWIQVCVMSS
Sbjct: 1505 FRLRSAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSS 1564
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1565 SLCWGVPLSAHLVVVMGTQYYDGRENAH 1592
Score = 119 bits (298), Expect(4) = 2e-62
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 7/354 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 756 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 815
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQG-VSHRHLS--DHLSELVENTL 1451
N E+V G +Q+ ++A + +T T++Y R+ +NP Y L V R L+ + ++L+ +
Sbjct: 816 NAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAA 875
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 876 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLS 935
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 936 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 994
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MVT+ MW + L Q E+
Sbjct: 995 MVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEIL 1054
Query: 1986 KKCQEKSIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEV 2141
K ++K + +DL E E +M + R +P ++L V
Sbjct: 1055 MKLEKKDLAWDRYYDLSSQEIGELIRFQKMGR----TLHRFIHQFPKLNLAAHV 1104
Score = 99.4 bits (246), Expect(4) = 2e-62
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPDSI------ 187
++ + N VQ++V+ + DN+L+ APTG+GK A IL+ DS
Sbjct: 389 FKGMQQLNRVQSKVYETALFAADNILLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHS 448
Query: 188 -LRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + ++ G+ V EL+G+ T+ + +++ Q+I++TPEKW
Sbjct: 449 NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 507
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 508 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 548
Score = 58.5 bits (140), Expect(4) = 2e-62
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L+ + + LK+ L YG H GL+ TD+ I++ G +QV V ++T+ W
Sbjct: 672 SREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAW 731
Query: 1031 AVPLSAHLVVVMGTQQY 1081
V L AH V++ GTQ Y
Sbjct: 732 GVNLPAHTVIIKGTQIY 748
Score = 33.5 bits (75), Expect(4) = 2e-62
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATA-HGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RPVPL G+ R Q M
Sbjct: 560 IRLVGLSATLPNYEDVALFLRVDLKEGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMN 619
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 620 DICYEKVM--AVAGKHQVLIFVHSRKETTKTA 649
>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 664 bits (1714), Expect(4) = 0.0
Identities = 333/440 (75%), Positives = 381/440 (86%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDNF
Sbjct: 1707 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1766
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VA VI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1767 NAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1826
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+T+EDD+ LSP+ LGMIA ERF EILASASEY
Sbjct: 1827 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYA 1886
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEE+++RRLINHQRFSFENP+ DPHVKANALLQAHF+RQ V GNLA DQ+EVL
Sbjct: 1887 QLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFTRQHVGGNLALDQREVL 1946
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
L A+RLLQAMVDVISS+GWL+LALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1947 LYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 2006
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
K+I T+FDLVEMEDDER ELLQMS+ QL+DIA+ C+ +PNIDL+Y+V++G NVRAG+
Sbjct: 2007 NPGKNIETIFDLVEMEDDERRELLQMSDLQLLDIAKFCNRFPNIDLSYDVLEGENVRAGE 2066
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQVT LEGRTEVGPV APRYPKAKEEGWWLVVG+T+SNQLLAIKRV+LQRK++V
Sbjct: 2067 NVTLQVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLVVGETRSNQLLAIKRVSLQRKAKV 2126
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F AP EA + YTLYFM
Sbjct: 2127 KLEFAAPTEAAKKAYTLYFM 2146
Score = 299 bits (765), Expect(4) = 0.0
Identities = 144/169 (85%), Positives = 160/169 (94%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1341 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1400
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
SI+R VYIAP EA+AK +Y DW+KKFG LGMRVVELTGET++DLKLLEKGQ++ISTPEK
Sbjct: 1401 SIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEK 1460
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVS+FIVDELHLIGGQGGPVLEVIVSRM+YI+SQ
Sbjct: 1461 WDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQ 1509
Score = 183 bits (464), Expect(4) = 0.0
Identities = 86/105 (81%), Positives = 97/105 (92%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1512 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1571
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSED 830
TKPT+TA+VQHA+ GKPAIV+VP RKH R+ AVDLM+YS +D+E+
Sbjct: 1572 TKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTAVDLMSYSKVDNEE 1616
Score = 129 bits (324), Expect(4) = 0.0
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
F L+S EL+PFV++I+E L+ TL++GVGYLHEGL+ DQ+++ E GWIQVCVMSS
Sbjct: 1619 FRLRSAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSS 1678
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW VPLSAHLVVVMGTQ YDGREN H
Sbjct: 1679 SLCWGVPLSAHLVVVMGTQYYDGRENAH 1706
Score = 119 bits (298), Expect(4) = 2e-62
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 7/354 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 870 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 929
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQG-VSHRHLS--DHLSELVENTL 1451
N E+V G +Q+ ++A + +T T++Y R+ +NP Y L V R L+ + ++L+ +
Sbjct: 930 NAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAA 989
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 990 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLS 1049
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1050 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1108
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MVT+ MW + L Q E+
Sbjct: 1109 MVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEIL 1168
Query: 1986 KKCQEKSIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEV 2141
K ++K + +DL E E +M + R +P ++L V
Sbjct: 1169 MKLEKKDLAWDRYYDLSSQEIGELIRFQKMGR----TLHRFIHQFPKLNLAAHV 1218
Score = 99.4 bits (246), Expect(4) = 2e-62
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPDSI------ 187
++ + N VQ++V+ + DN+L+ APTG+GK A IL+ DS
Sbjct: 503 FKGMQQLNRVQSKVYETALFAADNILLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHS 562
Query: 188 -LRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + ++ G+ V EL+G+ T+ + +++ Q+I++TPEKW
Sbjct: 563 NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 621
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 622 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 662
Score = 58.5 bits (140), Expect(4) = 2e-62
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L+ + + LK+ L YG H GL+ TD+ I++ G +QV V ++T+ W
Sbjct: 786 SREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAW 845
Query: 1031 AVPLSAHLVVVMGTQQY 1081
V L AH V++ GTQ Y
Sbjct: 846 GVNLPAHTVIIKGTQIY 862
Score = 33.5 bits (75), Expect(4) = 2e-62
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATA-HGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF+F RPVPL G+ R Q M
Sbjct: 674 IRLVGLSATLPNYEDVALFLRVDLKEGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMN 733
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 734 DICYEKVM--AVAGKHQVLIFVHSRKETTKTA 763
>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 664 bits (1712), Expect(4) = 0.0
Identities = 330/440 (75%), Positives = 376/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVD+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1715 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1774
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTL DL
Sbjct: 1775 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1834
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+T+E+D+ LSP+ LGMIA ERF EIL+SASEY
Sbjct: 1835 EASKCITIEEDMDLSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEYA 1894
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++R+LINHQRFSFENPK DPHVKANALLQAHFSRQ V GNLA DQ+EVL
Sbjct: 1895 QLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSRQFVGGNLALDQKEVL 1954
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL+LALL ME+SQMVTQGMWERDS+LLQLPHFTK+LAKKCQE
Sbjct: 1955 LSANRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQE 2014
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDL+EMEDDERHELL MS+ QL+DIAR C+ +PNIDL+YEV+D +VRAG+
Sbjct: 2015 NPGKSIETVFDLLEMEDDERHELLGMSDSQLLDIARFCNRFPNIDLSYEVLDSDSVRAGE 2074
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
DV+L VT LEG+TE+GPV APRYPKAKEEGWWLVVGDTK+N LLAIKRV+L RK +
Sbjct: 2075 DVTLLVTLERDLEGKTEIGPVDAPRYPKAKEEGWWLVVGDTKTNLLLAIKRVSLHRKLKA 2134
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+ G ++Y LYFM
Sbjct: 2135 KLEFAAPADTGRKSYALYFM 2154
Score = 287 bits (735), Expect(4) = 0.0
Identities = 138/169 (81%), Positives = 154/169 (91%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+ PD
Sbjct: 1349 RNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKVPD 1408
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VY+AP E+LAK +Y DW+KKFG L +RVVELTGET DLKLLEKGQ+IISTPEK
Sbjct: 1409 SVMRVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEK 1468
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK VQ VSLFI+DELHLIGGQGGP+LEV+VSRM+YI+SQ
Sbjct: 1469 WDALSRRWKQRKQVQLVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQ 1517
Score = 177 bits (448), Expect(4) = 0.0
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1520 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1579
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDS 824
TKPT+TAIVQHA+ KPA+++VP RKH R+ AVDL+TYS DS
Sbjct: 1580 TKPTYTAIVQHAKNRKPALIFVPTRKHVRLTAVDLITYSGADS 1622
Score = 122 bits (306), Expect(4) = 0.0
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+ ELEPF+E+I + MLK TL+ GVGYLHEGL+ D DI+ + GWIQVCV++S
Sbjct: 1627 FLLRPPEELEPFLEKIRDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNS 1686
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
+MCW V LSAHLVVVMGTQ YDGREN
Sbjct: 1687 SMCWGVTLSAHLVVVMGTQYYDGREN 1712
Score = 114 bits (284), Expect(4) = 7e-60
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 7/323 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 878 TELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQL 937
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A + + T++Y R+ +NP+ Y + V R L + ++L+
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAA 997
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 998 SILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1057
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1058 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1116
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MVT+ MW + L Q + +L
Sbjct: 1117 MVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGISSDLL 1176
Query: 1986 KKCQEKSIV--TVFDLVEMEDDE 2048
K ++K + +DL E E
Sbjct: 1177 TKLEKKDLAWERYYDLSSQEIGE 1199
Score = 99.0 bits (245), Expect(4) = 7e-60
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAIL------RNHQEGP--D 181
++ N VQ++V+ DN+L+ APTG+GK A IL RN ++G
Sbjct: 510 FKGMSQLNRVQSKVYDTALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPEDGSIDH 569
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S + VY+AP +AL + + + ++V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 570 SAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRELSGDQSLTRQQIEETQIIVTTPEK 628
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 629 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 670
Score = 57.0 bits (136), Expect(4) = 7e-60
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L+ + + LK+ L YG H G++ TD+ +++ G +QV V ++T+ W
Sbjct: 794 SREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 854 GVNLPAHTVIIKGTQIYN 871
Score = 32.3 bits (72), Expect(4) = 7e-60
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF F RPVPL G+ R Q M
Sbjct: 682 IRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMN 741
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 742 DICYEKVM--AVAGKHQVLIFVHSRKETAKTA 771
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 659 bits (1701), Expect(4) = 0.0
Identities = 329/440 (74%), Positives = 377/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVD+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1715 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1774
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTL DL
Sbjct: 1775 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1834
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+ KC+T+EDD+ L+P+ LGMIA ERF EIL+SASEY
Sbjct: 1835 EAGKCITIEDDMELAPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEYA 1894
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++R+LINHQRFSFENPK DPHVKANALLQAHFSRQ V GNLA DQ+EVL
Sbjct: 1895 QLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFSRQFVGGNLALDQKEVL 1954
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL+LALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAKKCQE
Sbjct: 1955 LSANRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQE 2014
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDL+EMED+ER +LL MS+ QL+DIAR C+ +PNIDL+YEV+D NVRAG+
Sbjct: 2015 NPGKSIETVFDLLEMEDEERQKLLGMSDLQLLDIARFCNRFPNIDLSYEVLDSDNVRAGE 2074
Query: 2172 DVSLQVTL----EGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
V++ VTL EGRTEVGPV APRYPKAKEEGWWL+VGDTK+N LLAIKRV+LQRK +
Sbjct: 2075 VVTVLVTLERDFEGRTEVGPVDAPRYPKAKEEGWWLIVGDTKTNLLLAIKRVSLQRKLKA 2134
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+AG ++Y+LYFM
Sbjct: 2135 KLEFDAPADAGRKSYSLYFM 2154
Score = 298 bits (762), Expect(4) = 0.0
Identities = 141/169 (83%), Positives = 158/169 (93%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RNS+YE+LY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+GPD
Sbjct: 1349 RNSSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPD 1408
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VY+AP EALAK +Y DW++KFG L +RVVELTGET DLKLLEKGQ+IISTPEK
Sbjct: 1409 SVMRVVYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEK 1468
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGP+LEV+VSRM+YI+SQ
Sbjct: 1469 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQ 1517
Score = 175 bits (443), Expect(4) = 0.0
Identities = 81/103 (78%), Positives = 92/103 (89%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NK R+V LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQG+D NFEARMQAM
Sbjct: 1520 NKSRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDITNFEARMQAM 1579
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDS 824
TKPT+TAIVQHA+ GKPA+++VP RKH R+ AVD++TYS DS
Sbjct: 1580 TKPTYTAIVQHAKNGKPALIFVPTRKHVRLTAVDMITYSGADS 1622
Score = 122 bits (306), Expect(4) = 0.0
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPF+++I + MLK TL+ GVGYLHEGL+ D DI+ E GWIQVCV++S
Sbjct: 1627 FLLRSAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNS 1686
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
+MCW V L AHLVVVMGTQ YDGREN
Sbjct: 1687 SMCWGVTLLAHLVVVMGTQYYDGREN 1712
Score = 109 bits (273), Expect(4) = 3e-58
Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 7/323 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 878 TELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQL 937
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A + + T++Y R+ +NP+ Y + V R L + ++L+
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAA 997
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 998 TILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLS 1057
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1058 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1116
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +M T+ MW + L Q +L
Sbjct: 1117 MVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMGTKRMWSVQTPLRQFNGIPSDLL 1176
Query: 1986 KKCQEKSIV--TVFDLVEMEDDE 2048
K ++K + +DL E E
Sbjct: 1177 TKLEKKDLAWERYYDLSSQEIGE 1199
Score = 98.6 bits (244), Expect(4) = 3e-58
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAIL------RNHQEGP--D 181
++ N VQ++V+ DN+L+ APTG+GK A IL RN ++G
Sbjct: 510 FKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPEDGSIDH 569
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S + VY+AP +AL + + + ++V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 570 SAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRELSGDQSLTRQQIEETQIIVTTPEK 628
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 629 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 670
Score = 56.2 bits (134), Expect(4) = 3e-58
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + LK+ L YG H G++ TD+ +++ G +QV V ++T+ W
Sbjct: 794 SREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 854 GVNLPAHTVIIKGTQIYN 871
Score = 32.3 bits (72), Expect(4) = 3e-58
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF F RPVPL G+ R Q M
Sbjct: 682 IRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMN 741
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 742 DICYEKVM--AVAGKHQVLIFVHSRKETAKTA 771
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 658 bits (1698), Expect(4) = 0.0
Identities = 328/440 (74%), Positives = 375/440 (85%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR LVD+SGKCVILCHAPRK+YYKKFLYEAFPVESHL H+LHDN
Sbjct: 1715 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1774
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N E+VAG+I++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTL DL
Sbjct: 1775 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1834
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+ KC+T+EDD+ L+P+ LGMIA ERF EIL+SASEY
Sbjct: 1835 EAGKCITIEDDMELAPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEYA 1894
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++R+LINHQRFSFENPK DPHVK NALLQAHFSRQ V GNLA DQ+EVL
Sbjct: 1895 QLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKTNALLQAHFSRQFVGGNLALDQKEVL 1954
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWL LALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAKKCQE
Sbjct: 1955 LSANRLLQAMVDVISSNGWLGLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQE 2014
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDL+EMED+ER ELL MS+ QL+DIAR C+ +PNIDL+YEV+D NVRAG+
Sbjct: 2015 NPGKSIETVFDLLEMEDNERQELLGMSDSQLLDIARFCNRFPNIDLSYEVLDSDNVRAGE 2074
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
V++ VT LEGRTEVGPV APRYPKAKEEGWWL+VGDTK+N LLAIKRV+LQR+ +
Sbjct: 2075 VVTVLVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLIVGDTKTNLLLAIKRVSLQRRLKA 2134
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APA+AG ++Y+LYFM
Sbjct: 2135 KLEFDAPADAGRKSYSLYFM 2154
Score = 293 bits (749), Expect(4) = 0.0
Identities = 139/169 (82%), Positives = 156/169 (92%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YE+LY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFAILRNHQ+ PD
Sbjct: 1349 RNPSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKWPD 1408
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VY+AP E+LAK +Y DW+KKFG L +RVVELTGET DLKLLEKGQ+IISTPEK
Sbjct: 1409 SVMRVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEK 1468
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRKHVQQVSLFI+DELHLIGGQGGP+LEV+VSRM+YI+SQ
Sbjct: 1469 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQ 1517
Score = 180 bits (457), Expect(4) = 0.0
Identities = 86/103 (83%), Positives = 94/103 (91%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIRVV LS SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQG+D ANFEARMQAM
Sbjct: 1520 NKIRVVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAM 1579
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDS 824
TKPT+TAIVQHA+ GKPA+V+VP RKH R+ AVDL+TYS DS
Sbjct: 1580 TKPTYTAIVQHAKNGKPALVFVPTRKHVRLTAVDLITYSGADS 1622
Score = 125 bits (313), Expect(4) = 0.0
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPF+++I + MLK TL+ GVGYLHEGL+ D+DI+ E GWIQVCV++S
Sbjct: 1627 FLLRSAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNS 1686
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
+MCW V LSAHLVVVMGTQ YDGREN
Sbjct: 1687 SMCWGVTLSAHLVVVMGTQYYDGREN 1712
Score = 112 bits (280), Expect(4) = 2e-59
Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 878 TELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQL 937
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A + + T++Y R+ +NP+ Y + V R L + ++L+
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAA 997
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 998 TILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLS 1057
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1058 EEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1116
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MVT+ MW + L Q +L
Sbjct: 1117 MVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDLL 1176
Query: 1986 KKCQEKSIV--TVFDLVEMEDDE 2048
K ++K + +DL E E
Sbjct: 1177 TKLEKKDLAWERYYDLSSQEIGE 1199
Score = 99.8 bits (247), Expect(4) = 2e-59
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAIL------RNHQEGP--D 181
++ N VQ++V+ DN+L+ APTG+GK A IL RN ++G
Sbjct: 510 FKGMTQLNRVQSKVYETALFQPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPKDGSIDH 569
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S + VY+AP +AL + + D ++V EL+G+ ++ + +E+ Q+I++TPEK
Sbjct: 570 SAYKIVYVAPMKALVAEVVGNLSNRLQD-YDVKVRELSGDQSLTRQQIEETQIIVTTPEK 628
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 629 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 670
Score = 56.2 bits (134), Expect(4) = 2e-59
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + LK+ L YG H G++ TD+ +++ G +QV V ++T+ W
Sbjct: 794 SREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 854 GVNLPAHTVIIKGTQIYN 871
Score = 32.3 bits (72), Expect(4) = 2e-59
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF F RPVPL G+ R Q M
Sbjct: 682 IRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMN 741
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 742 DICYEKVM--AVAGKHQVLIFVHSRKETAKTA 771
>ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|550326778|gb|EEE96945.2| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2186
Score = 657 bits (1694), Expect(4) = 0.0
Identities = 334/440 (75%), Positives = 372/440 (84%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFL+EAFPVES L H+LHDNF
Sbjct: 1718 TDYPVIDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLHEAFPVESRLHHFLHDNF 1777
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVVAGVI++KQDAVD LT TFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1778 NAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLADL 1837
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E SKCV +EDD+ LSP+ LGMIA ERF EIL+SASEY
Sbjct: 1838 EKSKCVAIEDDMDLSPLNLGMIASCYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYV 1897
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPI+PGEEE++RRLINHQRFSFENP+Y D HVKAN LLQAHFSRQ V GNLA +Q+EVL
Sbjct: 1898 QLPIQPGEEEMLRRLINHQRFSFENPRYADAHVKANVLLQAHFSRQSVGGNLALEQREVL 1957
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSASRLLQAM+ VISS+GWLN ALLAME+SQMVTQGMWERDS+LLQLPHFTKELAKKCQE
Sbjct: 1958 LSASRLLQAMIYVISSNGWLNCALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQE 2017
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMEDDER ELLQ+S+ Q++DI R C+ +PNID++YEVMDG NVRAG+
Sbjct: 2018 NPGKSIETVFDLVEMEDDERRELLQLSDSQVLDIVRFCNQFPNIDMSYEVMDGDNVRAGE 2077
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
D++L VT LEG TEVGPV APRYPK KEEGWWLVVGDTKSN LLAIKRV+LQRKS+V
Sbjct: 2078 DITLLVTLARDLEG-TEVGPVDAPRYPKPKEEGWWLVVGDTKSNLLLAIKRVSLQRKSKV 2136
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F AP +AG +YTLYFM
Sbjct: 2137 KLEFAAPTDAGRMSYTLYFM 2156
Score = 285 bits (730), Expect(4) = 0.0
Identities = 137/169 (81%), Positives = 153/169 (90%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN +YEALY+DFKHFNPVQTQVFTVLYN+DDNVLVAAPT SGK CAEFAILRNHQ+GP+
Sbjct: 1352 RNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTASGKTTCAEFAILRNHQKGPE 1411
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
++RAVYIAP E +AK +Y DW++KFG LGMRVVELTGET DLKLLE+GQ+IISTPEK
Sbjct: 1412 CVMRAVYIAPLEVIAKERYRDWERKFGQGLGMRVVELTGETATDLKLLERGQIIISTPEK 1471
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFI DELHLIG QGGPVLEVIVSRM+YI+SQ
Sbjct: 1472 WDALSRRWKQRKYVQQVSLFITDELHLIGDQGGPVLEVIVSRMRYIASQ 1520
Score = 176 bits (447), Expect(4) = 0.0
Identities = 85/114 (74%), Positives = 97/114 (85%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS+SLANAKDLGEWIGAT+HGLFNFPPGVRPVPLEIHIQGVD ANF+ARMQAM
Sbjct: 1523 NKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFDARMQAM 1582
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCFCCNLE 857
TKPT+T IV+HA+ GKPAIV+VP RKH ++ AVDLMTYS +D + F E
Sbjct: 1583 TKPTYTYIVKHAKNGKPAIVFVPTRKHVQLAAVDLMTYSSVDGGEKPAFLLRSE 1636
Score = 120 bits (301), Expect(4) = 0.0
Identities = 57/86 (66%), Positives = 70/86 (81%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL+S ELEPF+ +I E ML+ TL +GVGYLHEGLS DQ+++ E GWIQVCVMSS
Sbjct: 1631 FLLRSE-ELEPFIGKIQEEMLRATLYHGVGYLHEGLSSLDQEVVCQLFEAGWIQVCVMSS 1689
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGREN 1096
++CW +PLSAHLVVVMGTQ YDG+E+
Sbjct: 1690 SLCWGLPLSAHLVVVMGTQYYDGQED 1715
Score = 121 bits (303), Expect(2) = 1e-49
Identities = 106/383 (27%), Positives = 169/383 (44%), Gaps = 27/383 (7%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRN-----HQEGP--DS 184
+ + N VQ++V+ DN+L++APTG+GK A IL+ + +G ++
Sbjct: 510 FEGMQQLNRVQSKVYETALFKADNILLSAPTGAGKTNVAVLTILQQIALNRNLDGSFNNN 569
Query: 185 ILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + + G++V EL+G+ T+ + +E+ Q+I++TPEKW
Sbjct: 570 NYKIVYVAPMKALVAEVVGNLSNRLQE-YGVQVKELSGDQTMTRQQIEETQIIVTTPEKW 628
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR----MQYISSQGR*QDSSC 532
D ++R R + Q V L I+DE+HL+ GPVLE IV+R ++ R S
Sbjct: 629 DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKENIRLVGLSA 688
Query: 533 YFVEFSG*CQGFGGMDWGYGSWPFQLSSRCKARAAGNTYSGCRYSK-----L*G*DASHD 697
F F +D G + F S R Y G +K D H+
Sbjct: 689 TLPNFED-VALFLRVDLEKGLFHFDNSYR--PVPLSQQYIGININKPLQRFQLMNDICHE 745
Query: 698 KT-----------HAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFL 844
K HS T K + +T +R LR
Sbjct: 746 KVMDVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSR-------FLREDS------- 791
Query: 845 LQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTM 1024
SR L+ E + LK+ L YG H G++ D+ +++ +QV V ++T+
Sbjct: 792 -ASREILQTDSELVKSNDLKDLLPYGFAIHHAGMTRGDRHLVEERFRDRHVQVLVSTATL 850
Query: 1025 CWAVPLSAHLVVVMGTQQYDGRE 1093
W V L AH V++ GTQ Y+ E
Sbjct: 851 AWGVNLPAHTVIIKGTQIYNPEE 873
Score = 105 bits (262), Expect(2) = 1e-49
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 5/308 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 877 TELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQL 936
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNL-QGVSHRH--LSDHLSELVENTL 1451
N E+V G +Q+ ++A L T++Y R+ +NP Y L V R L + ++L+ +
Sbjct: 937 NAEIVLGSVQNAREACHWLEYTYLYVRMMRNPTLYGLAPDVLTRDITLEERRADLIHSAA 996
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ + V + LG IA + + + +
Sbjct: 997 TILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTMSTYNEHLKPTMGDIELCHLFSLS 1056
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1057 EEFKYVTVRQDEKMELAKLLDCVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1115
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RL++A+ +++ GW LA A+ + +M+ + MW + L Q E
Sbjct: 1116 MVFITQSAGRLMRALFEIVLKRGWARLAEKALNLCKMINKRMWSVQTPLRQFHGILNETL 1175
Query: 1986 KKCQEKSI 2009
++K +
Sbjct: 1176 MMLEKKDL 1183
>gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 648 bits (1671), Expect(4) = 0.0
Identities = 325/440 (73%), Positives = 369/440 (83%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
TDYPV+DLLQM+GHASR L+D+SGKCVILCHAPRK+YYKKFLYEAFPVESHL HYLHDN
Sbjct: 1711 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHYLHDNL 1770
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVV+G+I++KQDAVD LT TF+YRRLTQNPNYYNLQGV+ RHLSDHLSELVENTL DL
Sbjct: 1771 NAEVVSGIIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTQRHLSDHLSELVENTLTDL 1830
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKCV +EDD+ LS + LGMIA ERF EIL ASEY
Sbjct: 1831 EASKCVAIEDDMDLSSLNLGMIAAYYYTNYTTIERFSSSLTSKTKMKGLLEILTHASEYS 1890
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
QLPIRPGEEE++RRLINHQRFSFENPK DPHVKANALLQAHF+RQ + GNLA DQ+EV+
Sbjct: 1891 QLPIRPGEEEVLRRLINHQRFSFENPKCTDPHVKANALLQAHFARQHLGGNLALDQREVI 1950
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
+SASRLLQAMVDVISS GWL+LA+LAME+SQMVTQGMWERDS+LLQLPHFTKELAK+CQE
Sbjct: 1951 ISASRLLQAMVDVISSSGWLSLAILAMEVSQMVTQGMWERDSMLLQLPHFTKELAKRCQE 2010
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDL EM+DDER ELLQMS+ QL+DIA C+ +PNIDLT+EV + N+RAG
Sbjct: 2011 NPGKSIETVFDLFEMDDDERRELLQMSDKQLLDIALFCNRFPNIDLTHEVQNSDNIRAGG 2070
Query: 2172 DVSLQVT----LEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
++SLQVT LEGRTEVG V APRYPKAKEEGWWLVVGDTK+N LLAIKR + QR+++V
Sbjct: 2071 EISLQVTLERDLEGRTEVGTVNAPRYPKAKEEGWWLVVGDTKTNSLLAIKRFSFQRRTKV 2130
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KL+F APAEAG +NY LYFM
Sbjct: 2131 KLEFAAPAEAGEKNYILYFM 2150
Score = 281 bits (718), Expect(4) = 0.0
Identities = 136/168 (80%), Positives = 150/168 (89%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN YEALY+DFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK ICAEFA+LRNHQ+G D
Sbjct: 1344 RNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAVLRNHQKGSD 1403
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
S++R VYIAP EALAK +Y DW+KKFG L +R+ LTGET D KLLEKGQ+IISTPEK
Sbjct: 1404 SVMRVVYIAPIEALAKERYRDWEKKFGKGLKLRIELLTGETATDAKLLEKGQIIISTPEK 1463
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISS 505
WDALSR WKQRK VQQVSLFI+DELHLIGGQGGP+LEVIVSRM+YI+S
Sbjct: 1464 WDALSRRWKQRKPVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIAS 1511
Score = 179 bits (453), Expect(4) = 0.0
Identities = 85/109 (77%), Positives = 94/109 (86%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGA++HGLFNFPPGVRPVPLEIHIQGVD ANFEARMQAM
Sbjct: 1515 NKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDLANFEARMQAM 1574
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDTLCF 842
KPT+TAIVQHA+ GKPA+VYVP RKH R+ A+DLMTYS D + F
Sbjct: 1575 AKPTYTAIVQHAKNGKPALVYVPTRKHVRLTAIDLMTYSTADGGEKSSF 1623
Score = 125 bits (313), Expect(4) = 0.0
Identities = 57/88 (64%), Positives = 71/88 (80%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
F+L+ ++EPFVERI++ +L+ TL+ GVGYLHEGL+ DQ+++ E GWIQVCVMSS
Sbjct: 1623 FMLRPVEDIEPFVERISDEILRGTLRNGVGYLHEGLTSLDQEVVSQLFEAGWIQVCVMSS 1682
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
+MCW V LSAHLVVVMGTQ YDGREN H
Sbjct: 1683 SMCWGVSLSAHLVVVMGTQYYDGRENVH 1710
Score = 115 bits (288), Expect(4) = 2e-60
Identities = 81/329 (24%), Positives = 151/329 (45%), Gaps = 6/329 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
T+ D++QM+G A R DS G+ +I+ +YY + + P+ES L D
Sbjct: 873 TELSPLDVMQMLGRAGRPQFDSYGEGIIITGHNELQYYLSLMNQQLPIESQFVSKLADQL 932
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRH---LSDHLSELVENTL 1451
N E+V G +Q+ ++A L T++Y R+ +NP Y L+ + L + ++L+ +
Sbjct: 933 NAEIVLGTVQNAREACSWLGYTYLYIRMLRNPTLYGLEADVLKRDITLEERRADLIHSAA 992
Query: 1452 GDLESSKCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASA 1628
L+ S + + LG IA + + + +
Sbjct: 993 TILDKSNLIKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLS 1052
Query: 1629 SEYEQLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASD 1805
E++ + +R E+ + +L++ + +P K N LLQA+ S+ + G +L SD
Sbjct: 1053 EEFKYVTVRQDEKMELVKLLDRVPIPVKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSD 1111
Query: 1806 QQEVLLSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELA 1985
+ SA RLL+A+ +++ GW LA A+ + +MV + MW + L Q T ++
Sbjct: 1112 MVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVNKKMWSVQTPLRQFNGITNDIL 1171
Query: 1986 KKCQEKSIVTVFD-LVEMEDDERHELLQM 2069
K ++K + +D ++ E EL++M
Sbjct: 1172 MKLEKKDL--AWDRYYDLSSQELGELIRM 1198
Score = 100 bits (249), Expect(4) = 2e-60
Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 8/162 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRN---HQEGPDSIL-- 190
+R N VQ++V+ DN+L+ APTG+GK A IL+ H D +
Sbjct: 505 FRGMNQLNRVQSRVYETALFRADNILLCAPTGAGKTNVAVLTILQQIALHMNKEDGSINH 564
Query: 191 ---RAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
+ VY+AP +AL + + + G+ V EL+G+ T+ + +E+ Q+I++TPEK
Sbjct: 565 NDYKIVYVAPMKALVAEVVGNLSNRLKE-YGVTVRELSGDQTLTRQQIEETQIIVTTPEK 623
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
WD ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 624 WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVAR 665
Score = 56.6 bits (135), Expect(4) = 2e-60
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
SR L + + LK+ L YG H GL+ D+ +++ G +QV V ++T+ W
Sbjct: 789 SREILTTHTDLVKSNDLKDLLPYGFAIHHAGLNRADRQLVEDLFADGHVQVLVSTATLAW 848
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ YD
Sbjct: 849 GVNLPAHTVIIKGTQIYD 866
Score = 32.0 bits (71), Expect(4) = 2e-60
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATA-HGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF F RPVPL G+ R Q M
Sbjct: 677 IRLVGLSATLPNYEDVALFLRVDLKRGLFYFDNSYRPVPLSQQYIGIMVRKPLQRFQLMN 736
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 737 DLCYEKVMDVA--GKHQVLIFVHSRKETAKTA 766
>ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutrema salsugineum]
gi|557094115|gb|ESQ34697.1| hypothetical protein
EUTSA_v10006525mg [Eutrema salsugineum]
Length = 2160
Score = 647 bits (1669), Expect(4) = 0.0
Identities = 324/440 (73%), Positives = 369/440 (83%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
+DYPVSDLLQM+G ASR L+D++GKCVI CHAPRK+YYKKFLYEAFPVESHLQH+LHDNF
Sbjct: 1693 SDYPVSDLLQMMGRASRPLLDNAGKCVIFCHAPRKEYYKKFLYEAFPVESHLQHFLHDNF 1752
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVVAGVI++KQDAVD LT TFMYRRL QNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1753 NAEVVAGVIENKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 1812
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+ +ED++ LSP+ LGMIA ERF EIL SASEY+
Sbjct: 1813 EASKCIEIEDEMDLSPLNLGMIASYYYISYTTIERFSSLLSSKTKMKGLVEILTSASEYD 1872
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
+PIRPGEE+ +RRLINHQRFSFENPK DPHVKANALLQAHFSRQ + GNLA DQ+EVL
Sbjct: 1873 TIPIRPGEEDAVRRLINHQRFSFENPKCTDPHVKANALLQAHFSRQSISGNLAMDQREVL 1932
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQA+VDVISS+GWLNLALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1933 LSATRLLQAIVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 1992
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
KSI TVFDLVEMED+ER ELL+M + +L+DIAR C+ +PNIDLTYEV+ V G
Sbjct: 1993 NPGKSIETVFDLVEMEDEERQELLKMKDSELLDIARFCNRFPNIDLTYEVVGSEEVTPGK 2052
Query: 2172 DVSLQVTL----EGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQV L EGRTEVGPV APRYPK KEEGWWLVVGDT++NQLLAIKRV+LQRK +V
Sbjct: 2053 EVTLQVMLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGDTETNQLLAIKRVSLQRKLKV 2112
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDF P+E G ++YTLYFM
Sbjct: 2113 KLDFAVPSEPGEKSYTLYFM 2132
Score = 284 bits (727), Expect(4) = 0.0
Identities = 138/170 (81%), Positives = 154/170 (90%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN YE LY+DFKHFNPVQTQVFTVLYN++DNVLVAAPTGSGK ICAEFAIL+NHQEG D
Sbjct: 1326 RNPDYERLYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILKNHQEGSD 1385
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
+ +R VYIAP EA+AK Q+ W++KFG LG+RVVELTGETT+DLKLLEKGQ+IISTPEK
Sbjct: 1386 ATMRVVYIAPLEAIAKEQFRIWERKFGKGLGLRVVELTGETTLDLKLLEKGQIIISTPEK 1445
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQG 511
WDALSR WKQRK++QQVSLFIVDELHLIGG GG VLEVIVSRM+YISSQG
Sbjct: 1446 WDALSRRWKQRKYIQQVSLFIVDELHLIGGHGGTVLEVIVSRMRYISSQG 1495
Score = 175 bits (444), Expect(4) = 0.0
Identities = 83/106 (78%), Positives = 94/106 (88%)
Frame = +3
Query: 516 NKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEARMQAM 695
NKIR+V LS SLANAKDLGEWIGA++HGLFNFPPGVRPVPLEIHIQGVD ++FEARMQAM
Sbjct: 1497 NKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEARMQAM 1556
Query: 696 TKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDSEDT 833
TKPT+TAIVQHA+ KPAIV+VP RKH R+ AVDLM YS MD+ +
Sbjct: 1557 TKPTYTAIVQHAKNNKPAIVFVPTRKHVRLTAVDLMAYSHMDNSQS 1602
Score = 122 bits (305), Expect(4) = 0.0
Identities = 58/88 (65%), Positives = 66/88 (75%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL ELEPFV +I E LKETL++GVGYLHEGL DQ+I+ E G IQ CVMSS
Sbjct: 1605 FLLGKLEELEPFVSQIREETLKETLRHGVGYLHEGLCSMDQEIVTQLFEAGRIQACVMSS 1664
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW PL+AHLVVVMGTQ YDGREN H
Sbjct: 1665 SLCWGTPLTAHLVVVMGTQYYDGRENSH 1692
Score = 126 bits (317), Expect(2) = 9e-55
Identities = 104/377 (27%), Positives = 168/377 (44%), Gaps = 24/377 (6%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQ--EGPDSIL--- 190
++ + N VQ++V+ +N+L+ APTG+GK A IL+ + PD
Sbjct: 499 FKGMQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNPDGTYNHG 558
Query: 191 --RAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL ++ + D G+ V EL+G+ ++ K +E+ Q+I++TPEKW
Sbjct: 559 DYKIVYVAPMKALVAEVVSNLSNRLKD-YGVTVRELSGDQSLSGKEIEETQIIVTTPEKW 617
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR----MQYISSQGR*QDSSC 532
D ++R R + Q V L I+DE+HL+ GPVLE IV+R ++ R S
Sbjct: 618 DIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSA 677
Query: 533 YFVEFSG*C--------QGFGGMDWGYGSWPFQ-----LSSRCKARAAGNTYSGCRYSKL 673
+ +G D Y P +S + + C L
Sbjct: 678 TLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDICYQKVL 737
Query: 674 *G*DASHDKTHAHSNSTTCKDGKTSNSVCPQEETCTRQCSGSDDLLRHGQ*RHTVFLLQS 853
G HS T K +T +R D + R +LQS
Sbjct: 738 AGAGKHQVLIFVHSRKETAKTANAIKDTAMANDTLSRFLK-EDSVSRE--------VLQS 788
Query: 854 RTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCWA 1033
+ ++ I + LK+ L YG H GL+ D++I+++ G +QV V ++T+ W
Sbjct: 789 QIDI------IKNSDLKKLLPYGFAIHHAGLTRGDREIVESLFAEGHVQVLVSTATLAWG 842
Query: 1034 VPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 843 VNLPAHTVIIKGTQVYN 859
Score = 117 bits (292), Expect(2) = 9e-55
Identities = 92/408 (22%), Positives = 175/408 (42%), Gaps = 7/408 (1%)
Frame = +3
Query: 1119 DLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNFNTEVVA 1298
D++QM+G A R D SG+ +I+ +YY + E P+ES L D N E+V
Sbjct: 872 DVMQMLGRAGRPQYDQSGEGIIITGYSELQYYLSLMNEQLPIESQFISKLADQLNAEIVL 931
Query: 1299 GVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSELVENTLGDLESS 1469
G +Q+ ++A L T++Y R+ +NP Y L L + ++L+ + L+ +
Sbjct: 932 GTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALAKDVVLEERRADLIHSAATILDKN 991
Query: 1470 KCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYEQL 1646
V + LG IA F + + + E++ +
Sbjct: 992 NLVKYDRKSGYFQVTDLGRIASYYYITHGTIATFNEHLKPTMGDIDLYRLFSLSEEFKYV 1051
Query: 1647 PIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASDQQEVLL 1823
+R E+ + +L++ + +P K N LLQA+ S+ + G +L SD +
Sbjct: 1052 TVRQDEKMELAKLLDRVPIPIKE-TLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQ 1110
Query: 1824 SASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQEK 2003
SA RL++A+ +++ GW LA A+ +S+MV + MW + L Q ++ K ++K
Sbjct: 1111 SAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHGIPNDILMKLEKK 1170
Query: 2004 SIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGDDV 2177
+V +DL E E +M P + + +P ++L V ++
Sbjct: 1171 DLVWERYYDLSSQELGELIRSPKMGRP----LHKFIHQFPKVNLAAHVQPITRTVLKVEL 1226
Query: 2178 SLQVTLEGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTL 2321
++ + ++ P +W++V D ++L+ + T+
Sbjct: 1227 TITPDFQWDEKIHKYVEP---------FWIIVEDNDGEKILSSRDHTI 1265
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 644 bits (1662), Expect(4) = 0.0
Identities = 324/440 (73%), Positives = 369/440 (83%), Gaps = 7/440 (1%)
Frame = +3
Query: 1101 TDYPVSDLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNF 1280
+DYPV DLLQM+G ASR L+D++GKCVI CHAPRK+YYKKFLYEAFPVES LQH+LHDNF
Sbjct: 1704 SDYPVPDLLQMMGRASRPLLDNAGKCVIFCHAPRKEYYKKFLYEAFPVESQLQHFLHDNF 1763
Query: 1281 NTEVVAGVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLGDL 1460
N EVVAGVI++KQDAVD LT TFMYRRL QNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1764 NAEVVAGVIENKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 1823
Query: 1461 ESSKCVTVEDDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYE 1640
E+SKC+ VED++ LSP+ LGMIA ERF EIL SASEY+
Sbjct: 1824 EASKCIEVEDEMELSPLNLGMIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYD 1883
Query: 1641 QLPIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRGNLASDQQEVL 1820
+PIRPGEE+ +RRLINHQRFSFENPK DPHVKANALLQAHFSRQ + GNLA DQ++VL
Sbjct: 1884 MIPIRPGEEDTVRRLINHQRFSFENPKCTDPHVKANALLQAHFSRQNIGGNLAMDQRDVL 1943
Query: 1821 LSASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQE 2000
LSA+RLLQAMVDVISS+GWLNLALLAME+SQMVTQGMWERDS+LLQLPHFTK+LAK+CQE
Sbjct: 1944 LSATRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQE 2003
Query: 2001 ---KSIVTVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEVMDGGNVRAGD 2171
K+I TVFDLVEMED+ER ELL+MS+ QL+DIAR C+ +PNIDLTYE++ V G
Sbjct: 2004 NPGKNIETVFDLVEMEDEERQELLKMSDAQLLDIARFCNRFPNIDLTYEIVGSEEVNPGK 2063
Query: 2172 DVSLQVTL----EGRTEVGPVFAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRV 2339
+V+LQV L EGRTEVGPV + RYPK KEEGWWLVVGDTK+NQLLAIKRV+LQRK +V
Sbjct: 2064 EVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKV 2123
Query: 2340 KLDFTAPAEAGTRNYTLYFM 2399
KLDFTAP+E G ++YTLYFM
Sbjct: 2124 KLDFTAPSEPGEKSYTLYFM 2143
Score = 283 bits (724), Expect(4) = 0.0
Identities = 139/169 (82%), Positives = 152/169 (89%)
Frame = +2
Query: 2 RNSAYEALYRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPD 181
RN YE LY+DFKHFNPVQTQVFTVLYN++DNVLVAAPTGSGK ICAEFAILRNH EGPD
Sbjct: 1337 RNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILRNHHEGPD 1396
Query: 182 SILRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEK 361
+ +R VYIAP EA+AK Q+ W+ KFG LG+RVVELTGET +DLKLLEKGQ+IISTPEK
Sbjct: 1397 ATMRVVYIAPLEAIAKEQFRIWEGKFGKGLGLRVVELTGETALDLKLLEKGQIIISTPEK 1456
Query: 362 WDALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMQYISSQ 508
WDALSR WKQRK+VQQVSLFIVDELHLIGGQ GPVLEVIVSRM+YISSQ
Sbjct: 1457 WDALSRRWKQRKYVQQVSLFIVDELHLIGGQHGPVLEVIVSRMRYISSQ 1505
Score = 176 bits (446), Expect(4) = 0.0
Identities = 83/107 (77%), Positives = 96/107 (89%)
Frame = +3
Query: 504 AKAVNKIRVVTLSNSLANAKDLGEWIGATAHGLFNFPPGVRPVPLEIHIQGVDTANFEAR 683
++ +NKIR+V LS SLANAKDLGEWIGA++HGLFNFPPGVRPVPLEIHIQGVD ++FEAR
Sbjct: 1504 SQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEAR 1563
Query: 684 MQAMTKPTHTAIVQHARMGKPAIVYVPKRKHARVNAVDLMTYSDMDS 824
MQAMTKPT+TAIVQHA+ KPAIV+VP RKH R+ AVDLM YS MD+
Sbjct: 1564 MQAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMDN 1610
Score = 124 bits (310), Expect(4) = 0.0
Identities = 59/88 (67%), Positives = 68/88 (77%)
Frame = +2
Query: 839 FLLQSRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSS 1018
FLL EL+PFVE+I E LKETL +G+GYLHEGLS DQ+I+ E G IQVCVMSS
Sbjct: 1616 FLLGKLEELDPFVEQIREETLKETLCHGIGYLHEGLSSLDQEIVTQLFEAGRIQVCVMSS 1675
Query: 1019 TMCWAVPLSAHLVVVMGTQQYDGRENGH 1102
++CW PL+AHLVVVMGTQ YDGREN H
Sbjct: 1676 SLCWGTPLTAHLVVVMGTQYYDGRENSH 1703
Score = 112 bits (279), Expect(4) = 6e-59
Identities = 83/348 (23%), Positives = 155/348 (44%), Gaps = 7/348 (2%)
Frame = +3
Query: 1119 DLLQMIGHASRSLVDSSGKCVILCHAPRKKYYKKFLYEAFPVESHLQHYLHDNFNTEVVA 1298
D++QM+G A R D G+ +I+ +YY + E P+ES L D N E+V
Sbjct: 872 DVMQMLGRAGRPQYDQHGEGIIITGYSELQYYLSLMNEQLPIESQFISKLADQLNAEIVL 931
Query: 1299 GVIQSKQDAVD*LTCTFMYRRLTQNPNYYNLQG---VSHRHLSDHLSELVENTLGDLESS 1469
G +Q+ ++A L T++Y R+ +NP Y L L + ++L+ + L+ +
Sbjct: 932 GTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALAKDVVLEERRADLIHSAATILDKN 991
Query: 1470 KCVTVE-DDLLLSPVKLGMIAXXXXXXXXXXERFXXXXXXXXXXXXXXEILASASEYEQL 1646
V + LG IA + + + + E++ +
Sbjct: 992 NLVKYDRKSGYFQVTDLGRIASYYYITHGTIATYNEHLKPTMGDIDLYRLFSLSDEFKYV 1051
Query: 1647 PIRPGEEELIRRLINHQRFSFENPKYVDPHVKANALLQAHFSRQMVRG-NLASDQQEVLL 1823
+R E+ + +L++ + +P K N LLQA+ S+ + G +L SD +
Sbjct: 1052 TVRQDEKMELAKLLDRVPIPIKE-TLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQ 1110
Query: 1824 SASRLLQAMVDVISSDGWLNLALLAMEMSQMVTQGMWERDSLLLQLPHFTKELAKKCQEK 2003
SA RL++A+ +++ GW LA A+ +S+MV + MW + L Q + ++ + ++K
Sbjct: 1111 SAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHGLSNDILMQLEKK 1170
Query: 2004 SIV--TVFDLVEMEDDERHELLQMSEPQLMDIARSCDPYPNIDLTYEV 2141
+V +DL E E +M +P + + +P + L+ V
Sbjct: 1171 DLVWERYYDLSAQELGELIRSPKMGKP----LHKFIHQFPKVTLSAHV 1214
Score = 94.4 bits (233), Expect(4) = 6e-59
Identities = 54/161 (33%), Positives = 91/161 (56%), Gaps = 7/161 (4%)
Frame = +2
Query: 26 YRDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKIICAEFAILRNHQEGPDSI------ 187
++ + N VQ++V+ +N+L+ APTG+GK A IL+ + ++
Sbjct: 499 FKGMQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNTDGTYNHG 558
Query: 188 -LRAVYIAPHEALAKGQYNDWKKKFGDSLGMRVVELTGETTIDLKLLEKGQLIISTPEKW 364
+ VY+AP +AL + + D G+ V EL+G+ ++ + +E+ Q+I++TPEKW
Sbjct: 559 DYKIVYVAPMKALVAEVVGNLSNRLKD-YGVIVRELSGDQSLTGREIEETQIIVTTPEKW 617
Query: 365 DALSRSWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSR 487
D ++R R + Q V L I+DE+HL+ GPVLE IV+R
Sbjct: 618 DIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVAR 658
Score = 59.3 bits (142), Expect(4) = 6e-59
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +2
Query: 851 SRTELEPFVERINEAMLKETLKYGVGYLHEGLSGTDQDIMKTWVETGWIQVCVMSSTMCW 1030
+R L + + + LK+ L YG H GLS D++I++T G +QV V ++T+ W
Sbjct: 782 TRDVLHSHEDIVKNSDLKDILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAW 841
Query: 1031 AVPLSAHLVVVMGTQQYD 1084
V L AH V++ GTQ Y+
Sbjct: 842 GVNLPAHTVIIKGTQVYN 859
Score = 33.5 bits (75), Expect(4) = 6e-59
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +3
Query: 522 IRVVTLSNSLANAKDLGEWIGATAH-GLFNFPPGVRPVPLEIHIQGVDTANFEARMQAMT 698
IR+V LS +L N +D+ ++ GLF F RPVPL G+ R Q M
Sbjct: 670 IRLVGLSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMN 729
Query: 699 KPTHTAIVQHARMGK-PAIVYVPKRKHARVNA 791
+ ++ A GK +++V RK A
Sbjct: 730 DLCYQKVL--AGAGKHQVLIFVHSRKETSKTA 759