BLASTX nr result
ID: Atropa21_contig00033308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00033308
(666 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343061.1| PREDICTED: uncharacterized protein LOC102585... 198 1e-48
ref|XP_002516055.1| hypothetical protein RCOM_1494490 [Ricinus c... 77 6e-12
ref|XP_006426973.1| hypothetical protein CICLE_v10026471mg [Citr... 75 2e-11
ref|XP_006465602.1| PREDICTED: uncharacterized protein LOC102611... 74 3e-11
ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helica... 74 3e-11
ref|XP_002304197.1| hypothetical protein POPTR_0003s05250g [Popu... 74 3e-11
gb|EMJ17799.1| hypothetical protein PRUPE_ppa026802mg [Prunus pe... 74 5e-11
ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago tr... 73 7e-11
gb|EOY26784.1| Uncharacterized protein TCM_028742 [Theobroma cacao] 72 2e-10
gb|AAD39654.1|AC007591_19 EST gb|N65467 comes from this gene [Ar... 70 4e-10
ref|NP_563968.1| uncharacterized protein [Arabidopsis thaliana] ... 70 4e-10
ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305... 70 6e-10
ref|XP_006306014.1| hypothetical protein CARUB_v10011308mg [Caps... 70 6e-10
ref|NP_001235953.1| uncharacterized protein LOC100305733 [Glycin... 70 6e-10
ref|XP_002299702.1| hypothetical protein POPTR_0001s18280g [Popu... 70 7e-10
ref|XP_002890096.1| hypothetical protein ARALYDRAFT_471720 [Arab... 69 1e-09
ref|XP_006416930.1| hypothetical protein EUTSA_v10008881mg [Eutr... 68 2e-09
gb|AFK39048.1| unknown [Lotus japonicus] 68 2e-09
ref|XP_003546408.1| PREDICTED: uncharacterized protein LOC100802... 68 3e-09
ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helica... 67 4e-09
>ref|XP_006343061.1| PREDICTED: uncharacterized protein LOC102585680 [Solanum tuberosum]
Length = 229
Score = 198 bits (503), Expect = 1e-48
Identities = 102/156 (65%), Positives = 112/156 (71%)
Frame = +3
Query: 3 DDLYRDYYQQWHQPDHNETSERKISGKNARKYQGMTEGDCSESQRKISVRFGTKDIXXXX 182
DDLYRDYYQQWH PDHNE ERKI+ K ARKYQGM +G+ SESQRK++VRFG +DI
Sbjct: 75 DDLYRDYYQQWHHPDHNEIQERKITSKTARKYQGMADGNYSESQRKLAVRFGMEDIESER 134
Query: 183 XXXXXXXXXXILTRSTSSKEGXXXXXXXXXXXXXXXXXXDHVLDVEEVLQCYSLLSSPVY 362
+LTRSTS K DHVLD+EEVLQCY+LL+SPVY
Sbjct: 135 RKEDEKKGLEVLTRSTS-KGSLTLLKKMEELEMVEGEDMDHVLDIEEVLQCYTLLNSPVY 193
Query: 363 VDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
VDIVDRFFMDMYTEFSIRKPS SVNSSMRRLGPLKL
Sbjct: 194 VDIVDRFFMDMYTEFSIRKPSVSVNSSMRRLGPLKL 229
>ref|XP_002516055.1| hypothetical protein RCOM_1494490 [Ricinus communis]
gi|223544960|gb|EEF46475.1| hypothetical protein
RCOM_1494490 [Ricinus communis]
Length = 217
Score = 76.6 bits (187), Expect = 6e-12
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLDVEE L Y+ L SPVYVDIVD+FF DMY EFS+ + S S+NSS RRLG +L
Sbjct: 161 EHVLDVEEALHYYNRLRSPVYVDIVDQFFTDMYREFSVPQASASINSSKRRLGSKRL 217
>ref|XP_006426973.1| hypothetical protein CICLE_v10026471mg [Citrus clementina]
gi|557528963|gb|ESR40213.1| hypothetical protein
CICLE_v10026471mg [Citrus clementina]
Length = 214
Score = 74.7 bits (182), Expect = 2e-11
Identities = 34/57 (59%), Positives = 45/57 (78%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLDVEE L YS L SPVY+DIVD+FF DMY+E ++ + S S+N+S RRLG ++L
Sbjct: 158 EHVLDVEEALHYYSRLRSPVYLDIVDKFFTDMYSELNVPQASASINTSKRRLGSIRL 214
>ref|XP_006465602.1| PREDICTED: uncharacterized protein LOC102611115 [Citrus sinensis]
Length = 214
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLDVEE L YS L SPVY+DIVD+FF DMY E ++ + S S+N+S RRLG ++L
Sbjct: 158 EHVLDVEEALHYYSRLRSPVYLDIVDKFFTDMYAELNVPQASASINTSKRRLGSIRL 214
>ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform X1
[Cicer arietinum]
Length = 1136
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL*KQ 479
+HVLD+EE L YS L SPVY+DIVD+FFMD+ +EF + KPS S SS +LGP++L K+
Sbjct: 1077 EHVLDIEEALHYYSRLKSPVYLDIVDKFFMDINSEFIVPKPSVSFKSSREKLGPIQLRKR 1136
>ref|XP_002304197.1| hypothetical protein POPTR_0003s05250g [Populus trichocarpa]
gi|222841629|gb|EEE79176.1| hypothetical protein
POPTR_0003s05250g [Populus trichocarpa]
Length = 211
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLDVEE L YS L SPVY DIVD+FF +MYTEFS+ + S S+NSS RR+ ++L
Sbjct: 155 EHVLDVEEALHYYSRLKSPVYQDIVDKFFTNMYTEFSVPQASASINSSKRRIESIRL 211
>gb|EMJ17799.1| hypothetical protein PRUPE_ppa026802mg [Prunus persica]
Length = 214
Score = 73.6 bits (179), Expect = 5e-11
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Frame = +3
Query: 3 DDLYRDYYQQWHQPDHNETSERKISGKNARKYQGMTEGDCS--------ESQRKISVRFG 158
D Y D+Y W T ++ NA K + CS +S +K G
Sbjct: 53 DQFYTDFYDDWES-----TLDKANKRDNASKEPTKEDDACSGSSLDFSKQSPKKSKQEGG 107
Query: 159 TKDIXXXXXXXXXXXXXXILTRSTSSKEGXXXXXXXXXXXXXXXXXXDHVLDVEEVLQCY 338
K + S S G + VLDVEE L Y
Sbjct: 108 LKQKKQMGSSHHLGKKE--VQSSLQSMNGGSLAKKMKEFEMVDTSDVEQVLDVEEALHYY 165
Query: 339 SLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
S L SPVYVDIVD+FF+DMY++FS+ + S ++N+S RRLG +L
Sbjct: 166 SRLKSPVYVDIVDKFFLDMYSDFSVPRASININNSKRRLGSQRL 209
>ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase
chl1 [Medicago truncatula]
Length = 1129
Score = 73.2 bits (178), Expect = 7e-11
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL*KQ 479
+HVLD+EE L YS L SPVY+DIVDRFF+D+ ++F+ +PS S SS RLGP++L K+
Sbjct: 1070 EHVLDIEEALHYYSRLKSPVYLDIVDRFFIDINSDFTFPQPSASFKSSKERLGPVQLHKR 1129
>gb|EOY26784.1| Uncharacterized protein TCM_028742 [Theobroma cacao]
Length = 217
Score = 72.0 bits (175), Expect = 2e-10
Identities = 33/57 (57%), Positives = 43/57 (75%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLDVEE L YS L SPVY+ IVD+FFMDMY++FS+ + S S+N S RR ++L
Sbjct: 161 EHVLDVEEALHYYSRLKSPVYLSIVDKFFMDMYSDFSVPQASASINRSKRRFRSIRL 217
>gb|AAD39654.1|AC007591_19 EST gb|N65467 comes from this gene [Arabidopsis thaliana]
Length = 177
Score = 70.5 bits (171), Expect = 4e-10
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
DH LDV E L+CYS + SPVY+DIVD FF DMY EFS + S +N S R+ G +L
Sbjct: 121 DHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAKINGSRRKAGSFRL 177
>ref|NP_563968.1| uncharacterized protein [Arabidopsis thaliana]
gi|18252981|gb|AAL62417.1| unknown protein [Arabidopsis
thaliana] gi|21389659|gb|AAM48028.1| unknown protein
[Arabidopsis thaliana] gi|21592604|gb|AAM64553.1|
unknown [Arabidopsis thaliana]
gi|332191175|gb|AEE29296.1| uncharacterized protein
AT1G15260 [Arabidopsis thaliana]
Length = 178
Score = 70.5 bits (171), Expect = 4e-10
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
DH LDV E L+CYS + SPVY+DIVD FF DMY EFS + S +N S R+ G +L
Sbjct: 122 DHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAKINGSRRKAGSFRL 178
>ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305733 isoform X1 [Glycine
max]
Length = 1145
Score = 70.1 bits (170), Expect = 6e-10
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLD+EE L YS L SPVY+DIVD+FF DM +E S+ +P S+ S RLGP++L
Sbjct: 1088 EHVLDIEEALHYYSRLQSPVYLDIVDKFFKDMQSELSVPQPCVSLKPSKERLGPIRL 1144
>ref|XP_006306014.1| hypothetical protein CARUB_v10011308mg [Capsella rubella]
gi|482574725|gb|EOA38912.1| hypothetical protein
CARUB_v10011308mg [Capsella rubella]
Length = 176
Score = 70.1 bits (170), Expect = 6e-10
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
DH +DV E L+CYS + SPVY+DIVD FF DMY EFS + S ++N S R+ G +L
Sbjct: 120 DHAMDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSATINGSRRKAGSFRL 176
>ref|NP_001235953.1| uncharacterized protein LOC100305733 [Glycine max]
gi|255626465|gb|ACU13577.1| unknown [Glycine max]
Length = 152
Score = 70.1 bits (170), Expect = 6e-10
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLD+EE L YS L SPVY+DIVD+FF DM +E S+ +P S+ S RLGP++L
Sbjct: 95 EHVLDIEEALHYYSRLQSPVYLDIVDKFFKDMQSELSVPQPCVSLKPSKERLGPIRL 151
>ref|XP_002299702.1| hypothetical protein POPTR_0001s18280g [Populus trichocarpa]
gi|222846960|gb|EEE84507.1| hypothetical protein
POPTR_0001s18280g [Populus trichocarpa]
Length = 202
Score = 69.7 bits (169), Expect = 7e-10
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSS 443
+HVLDVEE L YS L SPVY+DIVD+FF +MYTEFS+ K S S NSS
Sbjct: 155 EHVLDVEEALHYYSRLKSPVYLDIVDKFFTNMYTEFSVPKASASTNSS 202
>ref|XP_002890096.1| hypothetical protein ARALYDRAFT_471720 [Arabidopsis lyrata subsp.
lyrata] gi|297335938|gb|EFH66355.1| hypothetical protein
ARALYDRAFT_471720 [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 69.3 bits (168), Expect = 1e-09
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
DH LDV E L+CYS + SPVY+DIVD FF DMY EFS + S +N S ++ G +L
Sbjct: 120 DHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAKINGSRKKAGSFRL 176
>ref|XP_006416930.1| hypothetical protein EUTSA_v10008881mg [Eutrema salsugineum]
gi|557094701|gb|ESQ35283.1| hypothetical protein
EUTSA_v10008881mg [Eutrema salsugineum]
Length = 182
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRR 452
DH LDV E L+CYS + SPVY+DIVD FF DMY EFS + S S+N+ RR
Sbjct: 125 DHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSSSINNGSRR 175
>gb|AFK39048.1| unknown [Lotus japonicus]
Length = 196
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSVNSSMRRLGPLKL 470
+HVLD+EE L YS L S VY+DIVD+FFMD+ +EF++ +PS S S +LGP++L
Sbjct: 137 EHVLDIEEALHYYSRLKSGVYLDIVDKFFMDINSEFTVPQPSASFKHSKGKLGPIQL 193
>ref|XP_003546408.1| PREDICTED: uncharacterized protein LOC100802301 [Glycine max]
Length = 217
Score = 67.8 bits (164), Expect = 3e-09
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Frame = +3
Query: 300 DHVLDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSGSV--NSSMRRLGPLKL 470
+HVLD+EE L YS L SPVY+DIVD+FFMDM++EFS++ S SV + S RLG ++L
Sbjct: 159 EHVLDIEEALHYYSRLKSPVYLDIVDKFFMDMHSEFSVQDSSISVKRSKSKGRLGSIRL 217
>ref|XP_004159020.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cucumis
sativus]
Length = 1168
Score = 67.4 bits (163), Expect = 4e-09
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 LDVEEVLQCYSLLSSPVYVDIVDRFFMDMYTEFSIRKPSG-SVNSSMRRLGPLKL 470
LD+EE + YS L SPVY++IVD+FFMDM++E S+ +PS SVNSS RR+G ++L
Sbjct: 1114 LDIEEAIHYYSRLRSPVYLEIVDKFFMDMHSEISVPEPSARSVNSSKRRIGSMRL 1168