BLASTX nr result

ID: Atropa21_contig00033197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00033197
         (451 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342553.1| PREDICTED: uncharacterized protein LOC102582...   273   2e-71
ref|XP_004253131.1| PREDICTED: uncharacterized protein LOC101252...   268   4e-70
ref|XP_002316604.2| pre-mRNA cleavage complex-related family pro...    62   6e-08
ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255...    60   4e-07
ref|XP_002518518.1| conserved hypothetical protein [Ricinus comm...    57   3e-06

>ref|XP_006342553.1| PREDICTED: uncharacterized protein LOC102582930 [Solanum tuberosum]
          Length = 976

 Score =  273 bits (697), Expect = 2e-71
 Identities = 129/149 (86%), Positives = 133/149 (89%)
 Frame = +3

Query: 3   LPENVPQLPQRHLTGEGSGISSATGESKHPLISNLAADGHTWRTPYVPPRMNPTFDSSVQ 182
           LPENVPQLP RHL GEGSGISSATGE KHPLI NLAADGHTWR PYVPPRMNPTFDSSVQ
Sbjct: 492 LPENVPQLPLRHLKGEGSGISSATGELKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQ 551

Query: 183 DIRVANGRAPGVPWPPTNVHNTQSLTSKPVVLPHNHIRSPFEVKNASNSVVNHSADRSVL 362
           DIRV  GR PGVPWPP NVH  QSLTSKPVVLPHNH+RSPFEV NASNSVVNH+ DR VL
Sbjct: 552 DIRVVTGRGPGVPWPPQNVHTPQSLTSKPVVLPHNHVRSPFEVNNASNSVVNHTLDRPVL 611

Query: 363 PEQHIDNLKSSSYIKFPQFPCQNPASFSA 449
           PEQHIDNLKSSS+IKFPQFP Q+P SFSA
Sbjct: 612 PEQHIDNLKSSSHIKFPQFPSQHPTSFSA 640


>ref|XP_004253131.1| PREDICTED: uncharacterized protein LOC101252266 [Solanum
           lycopersicum]
          Length = 975

 Score =  268 bits (686), Expect = 4e-70
 Identities = 125/148 (84%), Positives = 131/148 (88%)
 Frame = +3

Query: 3   LPENVPQLPQRHLTGEGSGISSATGESKHPLISNLAADGHTWRTPYVPPRMNPTFDSSVQ 182
           LPENVPQLP RHL GEGSGISS TGESKHPLI NLAADGHTWR PYVPPRMNPTFDSSVQ
Sbjct: 492 LPENVPQLPLRHLKGEGSGISSVTGESKHPLIGNLAADGHTWRPPYVPPRMNPTFDSSVQ 551

Query: 183 DIRVANGRAPGVPWPPTNVHNTQSLTSKPVVLPHNHIRSPFEVKNASNSVVNHSADRSVL 362
           D+RV  GR PGVPWPP NVH   SLTSKPVVLPHNH+RSP+EV NASNSVVNH+ DR VL
Sbjct: 552 DVRVVTGRGPGVPWPPQNVHTPHSLTSKPVVLPHNHVRSPYEVNNASNSVVNHTLDRPVL 611

Query: 363 PEQHIDNLKSSSYIKFPQFPCQNPASFS 446
           PEQHIDNLKSSS+IKFPQFP Q+P SFS
Sbjct: 612 PEQHIDNLKSSSHIKFPQFPSQHPTSFS 639


>ref|XP_002316604.2| pre-mRNA cleavage complex-related family protein [Populus
           trichocarpa] gi|550327247|gb|EEE97216.2| pre-mRNA
           cleavage complex-related family protein [Populus
           trichocarpa]
          Length = 1031

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
 Frame = +3

Query: 51  GSGISSATGESKHPLISNLA-ADGHTWRTPYVPPRMNPTFDSSVQDIRVANGRAPGVPWP 227
           GSG+SS  GE+ +PL+  L   D    R P +  R+  + DS+      +        WP
Sbjct: 555 GSGVSSLGGENFNPLVEKLPDMDAKLVRPPAIASRLGSSIDSNSSGTWSSAVLPLSGAWP 614

Query: 228 PTNVHNTQSLTSKPVVLPHNHIRSPFEVKNASNSVVNHSADR-SVLPEQHIDNLKSSSYI 404
           P NVH +          P    RS F+  N S++V N +  + SV+PEQ  ++ +S  Y+
Sbjct: 615 PVNVHKSLPPPVHSTFPPEKQSRSQFDPVNTSSTVTNQALQKASVMPEQSFNSFESKDYV 674

Query: 405 KFPQFPCQN 431
                P  N
Sbjct: 675 LMKPTPLPN 683


>ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255600 [Vitis vinifera]
          Length = 1000

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = +3

Query: 51  GSGISSATGESKHPLISNLA-ADGHTWRTPYVPPRMNPTFDSSVQDIRVANGRAPGVP-- 221
           GSGISS+  E+  PLISN+  AD    R P V  RM  +  +S+ ++ V +  AP     
Sbjct: 546 GSGISSSAAETISPLISNIPDADAQLRRLPTVASRMGSSSLNSM-NVEVQSAAAPASTGM 604

Query: 222 WPPTNVHNTQSLTSKPVVLPHNHIRSPFEVKNASNSVVNHSADRSV-LPE 368
           WPP NVH T        +     IR+ F + NA+ +VVN   ++S+ LPE
Sbjct: 605 WPPVNVHKTHLPPLLSNLPQTKQIRNQFNLMNATTAVVNQDPNKSLFLPE 654


>ref|XP_002518518.1| conserved hypothetical protein [Ricinus communis]
           gi|223542363|gb|EEF43905.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1023

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
 Frame = +3

Query: 51  GSGISSATGESKHPLISNLA-ADGHTWRTPYVPPRMNPTFDSSVQDIRVANGRAPGVPWP 227
           GSGISS+  E    L+  L  AD    R P +P RM+ +   S   +           WP
Sbjct: 572 GSGISSSGSEILASLVDQLPDADAQIIRPPTLPSRMSSSTALSSTGV-----------WP 620

Query: 228 PTNVHNTQSLTSKPVVLPHNHIRSPFEVKNASNSVVNHSADR-SVLPEQHIDNLKSS--S 398
             NVH +     +P+  P    RS  + +NASN+ VN    + S L EQ ++ L+S   S
Sbjct: 621 LVNVHKSHQPPLRPIFPPQMQSRSLLDPRNASNTAVNQGFQKSSFLSEQQLNGLESKEHS 680

Query: 399 YIKFPQFPCQNPA 437
             K P  P Q+ A
Sbjct: 681 LTKQPLLPSQHAA 693


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