BLASTX nr result
ID: Atropa21_contig00032544
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00032544 (559 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ... 176 4e-42 ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su... 176 4e-42 gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theob... 171 1e-40 ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutr... 169 5e-40 ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi... 168 7e-40 ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutr... 167 2e-39 ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Caps... 166 3e-39 ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr... 165 6e-39 ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype... 165 8e-39 emb|CBI40277.3| unnamed protein product [Vitis vinifera] 165 8e-39 ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su... 165 8e-39 emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] 165 8e-39 ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su... 164 1e-38 ref|NP_179145.1| DNA-directed RNA polymerase II subunit RPB3-A [... 164 1e-38 ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta... 164 1e-38 gb|AAM65319.1| DNA-directed RNA polymerase II, third largest sub... 164 1e-38 ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su... 164 2e-38 gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus pe... 163 2e-38 ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-... 163 3e-38 gb|AFK41039.1| unknown [Medicago truncatula] 163 3e-38 >ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum] Length = 319 Score = 176 bits (445), Expect = 4e-42 Identities = 88/91 (96%), Positives = 91/91 (100%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QVIVV+PEAYTYDDEVLKKAEAMGKPG++EIHAKEDSFIFTVETTGAVKASQLVLNAIEV Sbjct: 229 QVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319 >ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Solanum lycopersicum] Length = 319 Score = 176 bits (445), Expect = 4e-42 Identities = 88/91 (96%), Positives = 91/91 (100%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QVIVV+PEAYTYDDEVLKKAEAMGKPG++EIHAKEDSFIFTVETTGAVKASQLVLNAIEV Sbjct: 229 QVIVVDPEAYTYDDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319 >gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao] Length = 318 Score = 171 bits (432), Expect = 1e-40 Identities = 84/91 (92%), Positives = 91/91 (100%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYDDEVLKKAEAMGKPGL+EI+AKEDSFIFTVE+TGA+KASQLVLNAIEV Sbjct: 228 QVVVVDPEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEV 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum] gi|557089698|gb|ESQ30406.1| hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum] Length = 320 Score = 169 bits (427), Expect = 5e-40 Identities = 82/91 (90%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEA+GKPGLIEIH K+DSFIFTVETTGAVKASQLVLNAI++ Sbjct: 230 QVVVVDPEAYTYDEEVIKKAEALGKPGLIEIHPKDDSFIFTVETTGAVKASQLVLNAIDI 289 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 290 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 320 >ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi|297329735|gb|EFH60154.1| RBP36A [Arabidopsis lyrata subsp. lyrata] Length = 319 Score = 168 bits (426), Expect = 7e-40 Identities = 82/91 (90%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEAMGKPGLIEIH K+DSFIFTVE+TGAVKASQLVLNAI++ Sbjct: 229 QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDI 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319 >ref|XP_006409557.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] gi|557110719|gb|ESQ51010.1| hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] Length = 369 Score = 167 bits (423), Expect = 2e-39 Identities = 81/91 (89%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEAMGKPGLIEIH K+DSFIFTVE+TGAVKASQLVLNAI++ Sbjct: 279 QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDI 338 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAH+RGG Sbjct: 339 LKQKLDAVRLSDDTVEADDQFGELGAHLRGG 369 >ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Capsella rubella] gi|482566867|gb|EOA31056.1| hypothetical protein CARUB_v10014208mg [Capsella rubella] Length = 319 Score = 166 bits (421), Expect = 3e-39 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEAMGKPGLIEIH K+DSFIFTVE+TGAVKASQLVLNAI++ Sbjct: 229 QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDI 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHM GG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMHGG 319 >ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina] gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Citrus sinensis] gi|557524889|gb|ESR36195.1| hypothetical protein CICLE_v10028849mg [Citrus clementina] Length = 319 Score = 165 bits (418), Expect = 6e-39 Identities = 82/91 (90%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV VV+ EAYTYDDEV+KKAEAMGKPGL+EI+AKEDSFIFTVE+TGA+KASQLVLNAIEV Sbjct: 229 QVYVVDAEAYTYDDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEV 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319 >ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] gi|550331423|gb|EEE87820.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] Length = 323 Score = 165 bits (417), Expect = 8e-39 Identities = 82/91 (90%), Positives = 88/91 (96%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYDDEV+KKAEAMGK GLI+I AKEDSFIFTVE+TGAVKASQLVLNAIE+ Sbjct: 233 QVVVVDPEAYTYDDEVIKKAEAMGKRGLIDIRAKEDSFIFTVESTGAVKASQLVLNAIEI 292 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELG HMRGG Sbjct: 293 LKQKLDAVRLSDDTVEADDQFGELGVHMRGG 323 >emb|CBI40277.3| unnamed protein product [Vitis vinifera] Length = 206 Score = 165 bits (417), Expect = 8e-39 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+V + EAYTYDDEVLKKAEAMGKPGL+EI+AKEDSFIFTVE+TGA+KASQLVLNAI+V Sbjct: 116 QVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDV 175 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 176 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 206 >ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis vinifera] Length = 318 Score = 165 bits (417), Expect = 8e-39 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+V + EAYTYDDEVLKKAEAMGKPGL+EI+AKEDSFIFTVE+TGA+KASQLVLNAI+V Sbjct: 228 QVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDV 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera] Length = 318 Score = 165 bits (417), Expect = 8e-39 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+V + EAYTYDDEVLKKAEAMGKPGL+EI+AKEDSFIFTVE+TGA+KASQLVLNAI+V Sbjct: 228 QVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDV 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Fragaria vesca subsp. vesca] Length = 318 Score = 164 bits (415), Expect = 1e-38 Identities = 79/91 (86%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 +V+VV+PEAYTYDDEV+KKAEAMGKPGL++I AKEDSFIFTVE+TGA+KASQL+LNAIE+ Sbjct: 228 KVVVVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLLLNAIEI 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >ref|NP_179145.1| DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis thaliana] gi|11134646|sp|Q39211.1|NRPB3_ARATH RecName: Full=DNA-directed RNA polymerases II, IV and V subunit 3; AltName: Full=DNA-directed RNA polymerase II 36 kDa polypeptide A; AltName: Full=DNA-directed RNA polymerase II subunit RPB3-A; Short=RNA polymerase II subunit 3-A; Short=RNA polymerase II subunit B3-A gi|514318|gb|AAB03741.1| RNA polymerase II third largest subunit [Arabidopsis thaliana] gi|4544370|gb|AAD22281.1| DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana] gi|17381018|gb|AAL36321.1| putative DNA-directed RNA polymerase II third largest subunit [Arabidopsis thaliana] gi|20465883|gb|AAM20046.1| putative DNA-directed RNA polymerase II [Arabidopsis thaliana] gi|330251306|gb|AEC06400.1| DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis thaliana] Length = 319 Score = 164 bits (415), Expect = 1e-38 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEAMGKPGLIEI K+DSFIFTVE+TGAVKASQLVLNAI++ Sbjct: 229 QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDL 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319 >ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis] Length = 318 Score = 164 bits (415), Expect = 1e-38 Identities = 79/91 (86%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAE+MGKPGL+ I AKEDSFIFTVE+TGA+KASQLVLNAIE+ Sbjct: 228 QVVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEI 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >gb|AAM65319.1| DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana] Length = 319 Score = 164 bits (415), Expect = 1e-38 Identities = 81/91 (89%), Positives = 89/91 (97%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAYTYD+EV+KKAEAMGKPGLIEI K+DSFIFTVE+TGAVKASQLVLNAI++ Sbjct: 229 QVVVVDPEAYTYDEEVIKKAEAMGKPGLIEISPKDDSFIFTVESTGAVKASQLVLNAIDL 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 319 >ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum] Length = 319 Score = 164 bits (414), Expect = 2e-38 Identities = 80/91 (87%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAY+YDDEV+KKAEAMGKPGL+EI AK+DSFIFTVE+TGAVKASQL+LNAIE+ Sbjct: 229 QVMVVDPEAYSYDDEVIKKAEAMGKPGLVEITAKQDSFIFTVESTGAVKASQLLLNAIEI 288 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 289 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 319 >gb|EMJ03015.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica] Length = 318 Score = 163 bits (413), Expect = 2e-38 Identities = 80/91 (87%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 +V+VV+PEAYTYDDEV+KKAEAMGKPGL++I AKEDSFIFTVE+TGAVKASQL+LNAIE+ Sbjct: 228 KVMVVDPEAYTYDDEVIKKAEAMGKPGLVDIIAKEDSFIFTVESTGAVKASQLLLNAIEI 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >ref|XP_003607895.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula] gi|355508950|gb|AES90092.1| DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] Length = 318 Score = 163 bits (412), Expect = 3e-38 Identities = 80/91 (87%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAY+YDDEV+KKAEAMGKPGLIEI AK+DSFIFTVE+TGAVKASQL+LN+IE+ Sbjct: 228 QVMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEI 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318 >gb|AFK41039.1| unknown [Medicago truncatula] Length = 318 Score = 163 bits (412), Expect = 3e-38 Identities = 80/91 (87%), Positives = 90/91 (98%) Frame = +3 Query: 3 QVIVVEPEAYTYDDEVLKKAEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEV 182 QV+VV+PEAY+YDDEV+KKAEAMGKPGLIEI AK+DSFIFTVE+TGAVKASQL+LN+IE+ Sbjct: 228 QVMVVDPEAYSYDDEVIKKAEAMGKPGLIEITAKQDSFIFTVESTGAVKASQLLLNSIEI 287 Query: 183 LKQKLDAVRLSDDTVEADDQFGELGAHMRGG 275 LKQKLDAVRLS+DTVEADDQFGELGAHMRGG Sbjct: 288 LKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318